Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G16660 1166 / 0 heat shock protein 70 (Hsp 70) family protein (.1) AT3G12580 230 / 8e-65 ATHSP70, HSP70 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) AT5G28540 226 / 3e-63 BIP1 heat shock protein 70 (Hsp 70) family protein (.1) AT1G09080 226 / 4e-63 BIP3 binding protein 3, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) AT5G42020 226 / 4e-63 BIP2, BIP luminal binding protein, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) AT5G02490 223 / 4e-62 AtHsp70-2 Heat shock protein 70 (Hsp 70) family protein (.1) AT1G56410 222 / 4e-62 HSP70T-1, ERD2 HEAT SHOCK PROTEIN 70T-1, EARLY-RESPONSIVE TO DEHYDRATION 2, heat shock protein 70 (Hsp 70) family protein (.1) AT5G02500 221 / 9e-62 AtHsp70-1, AT-HSC70-1, HSP70-1, HSC70-1 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) AT1G16030 219 / 5e-61 HSP70B heat shock protein 70B (.1) AT1G11660 220 / 2e-60 heat shock protein 70 (Hsp 70) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039014 [exp] 1532 / 0 AT4G16660 1288 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Lus10040078 [exp] 238 / 9e-67 AT1G11660 919 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Lus10017306 [exp] 234 / 3e-65 AT5G28540 1169 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Lus10019627 [exp] 233 / 4e-65 AT1G11660 916 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Lus10005953 [exp] 228 / 6e-64 AT5G02500 1207 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Lus10002319 [exp] 225 / 8e-63 AT3G12580 1160 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Lus10025276 [exp] 221 / 3e-61 AT5G02500 1233 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Lus10025333 [exp] 220 / 3e-61 AT5G02500 1236 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Lus10021345 [exp] 216 / 8e-61 AT5G28540 843 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G022100 [exp] 1196 / 0 AT4G16660 1229 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Potri.016G019800 [exp] 1180 / 0 AT4G16660 1178 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Potri.001G042600 [exp] 230 / 1e-64 AT3G12580 1061 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Potri.001G087500 [exp] 230 / 1e-64 AT5G42020 1184 / 0.0 luminal binding protein, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) Potri.012G017600 [exp] 230 / 2e-64 AT5G28540 1093 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Potri.013G018000 [exp] 229 / 3e-64 AT5G28540 991 / 0.0 heat shock protein 70 (Hsp 70) family protein (.1) Potri.003G143600 [exp] 229 / 3e-64 AT5G42020 1205 / 0.0 luminal binding protein, Heat shock protein 70 (Hsp 70) family protein (.1), Heat shock protein 70 (Hsp 70) family protein (.2) Potri.001G042700 [exp] 227 / 1e-63 AT3G12580 1058 / 0.0 ARABIDOPSIS HEAT SHOCK PROTEIN 70, heat shock protein 70 (.1) Potri.008G054600 [exp] 226 / 2e-63 AT5G02500 1149 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2) Potri.010G205700 [exp] 226 / 2e-63 AT5G02500 1119 / 0.0 HEAT SHOCK PROTEIN 70-1, ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1, heat shock cognate protein 70-1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0108 [flax] [poplar] Actin_ATPase PF00012 [flax] [poplar] HSP70 Hsp70 protein
Representative CDS sequence Show only first row Show all	>Lus10027310 pacid=23145358 polypeptide=Lus10027310 locus=Lus10027310.g ID=Lus10027310.BGIv1.0 annot-version=v1.0 ATGGCGGAATTGCAGGGAAGGAGAGCGGCGGATTGGGGCTGTTTGTCGACGACGATGAGGTCGACGATGCTGATCAAATTGGGGTTGCTTCTCTGCTTCA TTTCTGTAAACTTAATCCCGTCCCAATCGGCCGTCTCCAGCATAGATCTAGGGTCGGAATGGATGAAAGTAGCTGTAGTGAACCTCAAACCAGGTCAATC CCCGATTGCCATCGCGATCAATGAAATGTCCAAGCGCAAGTCTCCCGCCTTAGTGTCGTTCCACTCCGGGACGCGGCTCCTGGCCGAGGAGGCTGCCGGA ATCACAGCTCGGTACCCTAATAAAGTGTTCTCGCAGCTGCGGGATATGATAGGGAAACCGTACAATGACGTGAAGGTAGTTTTGGATTCAATGTACCTGC CGTTTGATGCTGTGGAGGATTCCAGGGGATCTGTTGCGTTTAAGGTTGATGAGGGCCAAGTTTTTTCCGTTGAGGAATTGTTGGCTATGGTTTTGGGTTA CGCTTCGAATTTGGCTGAGGTCCATGCCAAACTACCCGTGAAGGATGCTGTCATTAGCGTGCCGCCATATTTTGGTCAGGCGGAGAGGAGAGGGTTGATT CAGGCAGCTCAGCTGGCTGGGATTAATGTTCTTACGTTGATTAATGAGCATTCTGGTGCGGCATTGCAGTACGGGATTGATAAAGATTTCTCAAATGGAT CGAGATATGTGATATTCTATGATATGGGTTCAAGTAGTACTTATGCTGCACTAGTCTATTATTCGGCCTACAACACCAAGGAGTATGGGAAGACTGTGTC GGTCAATCAGTTTCAGGTTAAGGATGTTAGATGGGATTCGCAGCTTGGAGGTCAGAGCATGGAAATGCGGTTGGTGGAATACTTTGCAGATGAATTTAAC AAGCAAGTTGGAAATGGAGTTGATGTGCGGAAGTCTCCCAAGTCGATGGCTAAACTGAAGAAGCAGGTTAAGCGGACAAAGGAAATATTGAGCGCAAATA CAGCGGCTCCAATATCAGTTGAATCTCTATATGACGATCGGGATTTTAGGAGCACTATTACACGGGAGAAGTTTGAAGAGTTATGTGGTGATCTGTGGGA CAGATCCCTTCTCCCCATCAAAGAAGTAATGAAGCATTCAGACCTGAAAGTGGATGATATATCTGCTGTAGAGCTTATTGGAGGTGCCACAAGGGTGCCA AAGTTGCAGGCTAAGATCCAAGAATTTCTTGGAAGAAACGAGTTGGACAAACATCTGGATGCAGATGAAGCTATAGTTCTTGGTGGAGCATTGCATGCTG CAAATTTAAGTGATGGAATCAAATTGAACCGCAAGCTAGGGATGATTGATGGTTCTCCATATGGATTGTCCGTTGTACTTGATGGGCCAGACATGAAAGA TGAGTACTCAAGGCAGTCACTGGTGCCTAGAATGAAAAAGGTTCCCAGTAAGATGTTCAGATCCATTATCCACAACAAAGATTTTGAAGTTTCACTTGAA TATGAGACTGAGGATCCTTTACCACCCAGCATAAGCTCTCCCCTGTTTGCACAGTATTCTGTGTCTGGTCTTACTGAGGCGAGTGAGAAGTACTCATCAC GGAATCTTTCCTCCCCCGTTAAGGCAAGTCTGCATTTTTCAATCAGTAGAAGTGGTGTTCTCTCATTGGACAGAGCAGATGCTGTTATTGAGATATCAGA GTGGGTGGAAGTCCCAATAAAAAAGAATCTTACCCTTGAAACTATCACCAACTCTTCAAGTAGTTCTCCAGAAACTGCCGAGAATACCACAACTAGCTCC ACAACTGAGAGTTCTTCAGAGGAAAGTAATGAAAACCTGCAATCTGATGGTGCAGCGGGCAACGAATTTAACCCAGATGTCAAAGAACCAAATACCACTG AAGCGGCTACAGAAAAGAAGTTGAAAAAGCGGACTTTCAGGGTTCCATTGAAGATCATTGAAAAGACAGCAGGACCTGGAAAGCCTCTTTCAGAAGAATC TTTGGCTGAAGCTAAAAAGAAGCTGGAAGAATTGAACAAGAAGGACTCAGAGCGAAGAAGAACTGCCGAGTCCAAGAATAACTTAGAAGGGTATATATAC TCGACAAAAGAAAAGCTTGAAACAGACGAGGAGATTCACAAGATATCTTCTAGTGAAGAACGCCAATCATTCATTGAAAAGCTCGATGAAGTTCAAGACT GGCTATACATGGATGGTGAAGATGCAACTGCCAGTGAGTTTGAGCAACGCCTGGACTCCTTGAAAGTCATTGGTGATCCAATATTTTTCCGACACAAGGA GCTCACAGATAGGCCAGCTGCAACTCAACTCGCTATGAAATACCTCGGTGAGCTGAAACAGATTGTAGAAGGTTGGGAGGCAAACAAACCTTGGCTCCCT AAGGATAAAATAACCGAGGTTCTGAACGAAGCGGAAAAGTTGAAGAGTTGGCTTGATGAGAAGGAGGCTGAGCAGAAGCAGACTTCTGGATACAGCAAGC CAGCGTTTACGTCTGAAGAAGTGTACACCAAAGTGTTCAAATTGCAAGACAAGGTGACTAGCGTCAACAGAATTCCAAAGCCGAAACCTAAAGTAGAGAA GCCTAAGAAGAACGAGACAGAGGAGCCTAAGAAGGCCGAGAGGGAAGAACCTAAGAAGACGGATTCCGAGAAGAGTAGTGAGAGTTCTGAGAAAACCACC GGCGACAACAATGGTGAAGATACTACTAAGGCACACGACGAGTTGTGA
AA sequence Show only first row Show all	>Lus10027310 pacid=23145358 polypeptide=Lus10027310 locus=Lus10027310.g ID=Lus10027310.BGIv1.0 annot-version=v1.0 MAELQGRRAADWGCLSTTMRSTMLIKLGLLLCFISVNLIPSQSAVSSIDLGSEWMKVAVVNLKPGQSPIAIAINEMSKRKSPALVSFHSGTRLLAEEAAG ITARYPNKVFSQLRDMIGKPYNDVKVVLDSMYLPFDAVEDSRGSVAFKVDEGQVFSVEELLAMVLGYASNLAEVHAKLPVKDAVISVPPYFGQAERRGLI QAAQLAGINVLTLINEHSGAALQYGIDKDFSNGSRYVIFYDMGSSSTYAALVYYSAYNTKEYGKTVSVNQFQVKDVRWDSQLGGQSMEMRLVEYFADEFN KQVGNGVDVRKSPKSMAKLKKQVKRTKEILSANTAAPISVESLYDDRDFRSTITREKFEELCGDLWDRSLLPIKEVMKHSDLKVDDISAVELIGGATRVP KLQAKIQEFLGRNELDKHLDADEAIVLGGALHAANLSDGIKLNRKLGMIDGSPYGLSVVLDGPDMKDEYSRQSLVPRMKKVPSKMFRSIIHNKDFEVSLE YETEDPLPPSISSPLFAQYSVSGLTEASEKYSSRNLSSPVKASLHFSISRSGVLSLDRADAVIEISEWVEVPIKKNLTLETITNSSSSSPETAENTTTSS TTESSSEESNENLQSDGAAGNEFNPDVKEPNTTEAATEKKLKKRTFRVPLKIIEKTAGPGKPLSEESLAEAKKKLEELNKKDSERRRTAESKNNLEGYIY STKEKLETDEEIHKISSSEERQSFIEKLDEVQDWLYMDGEDATASEFEQRLDSLKVIGDPIFFRHKELTDRPAATQLAMKYLGELKQIVEGWEANKPWLP KDKITEVLNEAEKLKSWLDEKEAEQKQTSGYSKPAFTSEEVYTKVFKLQDKVTSVNRIPKPKPKVEKPKKNETEEPKKAEREEPKKTDSEKSSESSEKTT GDNNGEDTTKAHDEL

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G16660			heat shock protein 70 (Hsp 70)...		Lus10027310 [exp]	0	1
AT4G16660			heat shock protein 70 (Hsp 70)...		Lus10039014 [exp]	1.0	0.8899
AT1G64550		SCORD5, AtGCN20...	susceptible to coronatine-defi...		Lus10023043 [exp]	2.4	0.8599
AT4G24190		AtHsp90-7, HSP9...	SHEPHERD, HEAT SHOCK PROTEIN 9...		Lus10034535 [exp]	3.2	0.8502
AT1G07670		ATECA4	endomembrane-type CA-ATPase 4 ...		Lus10038484 [exp]	7.5	0.8419
AT1G04430			S-adenosyl-L-methionine-depend...		Lus10021177 [exp]	11.1	0.8557
AT1G04430			S-adenosyl-L-methionine-depend...		Lus10011815 [exp]	11.2	0.8562
AT5G64740		PRC1, IXR2, E11...	PROCUSTE 1, ISOXABEN RESISTANT...		Lus10002939 [exp]	11.7	0.8444
AT5G64740		PRC1, IXR2, E11...	PROCUSTE 1, ISOXABEN RESISTANT...		Lus10002940 [exp]	21.4	0.8300
AT3G02090		MPPBETA	Insulinase (Peptidase family M...		Lus10004939 [exp]	22.9	0.8145
AT1G78570		ATRHM1, RHM1, R...	REPRESSOR OF LRX1 1, ARABIDOPS...		Lus10005560 [exp]	23.4	0.8317

Compare expression of checked genes

Lus10027310 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.