Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47540 591 / 0 Mo25 family protein (.1) AT4G17270 549 / 0 Mo25 family protein (.1) AT2G03410 455 / 2e-161 Mo25 family protein (.1) AT5G18940 264 / 2e-86 Mo25 family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010497 [exp] 657 / 0 AT5G47540 594 / 0.0 Mo25 family protein (.1) Lus10017565 [exp] 656 / 0 AT5G47540 593 / 0.0 Mo25 family protein (.1) Lus10039045 [exp] 590 / 0 AT5G47540 517 / 0.0 Mo25 family protein (.1) Lus10041405 [exp] 435 / 9e-153 AT5G47540 446 / 3e-157 Mo25 family protein (.1) Lus10036523 [exp] 432 / 2e-151 AT5G47540 446 / 1e-156 Mo25 family protein (.1) Lus10034014 [exp] 251 / 3e-81 AT5G18940 522 / 0.0 Mo25 family protein (.1.2) Lus10012762 [exp] 238 / 6e-76 AT5G18940 512 / 0.0 Mo25 family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G011100 [exp] 592 / 0 AT5G47540 589 / 0.0 Mo25 family protein (.1) Potri.010G155400 [exp] 590 / 0 AT5G47540 588 / 0.0 Mo25 family protein (.1) Potri.006G014800 [exp] 588 / 0 AT5G47540 569 / 0.0 Mo25 family protein (.1) Potri.002G222800 [exp] 476 / 1e-169 AT5G47540 458 / 1e-162 Mo25 family protein (.1) Potri.014G162100 [exp] 469 / 5e-166 AT5G47540 461 / 1e-162 Mo25 family protein (.1) Potri.019G057100 [exp] 438 / 1e-154 AT5G47540 411 / 5e-144 Mo25 family protein (.1) Potri.010G155300 [exp] 337 / 1e-116 AT5G47540 348 / 6e-121 Mo25 family protein (.1) Potri.010G028700 [exp] 258 / 3e-84 AT5G18940 469 / 5e-167 Mo25 family protein (.1.2) Potri.016G011300 [exp] 251 / 5e-84 AT5G47540 262 / 1e-88 Mo25 family protein (.1) Potri.008G198900 [exp] 250 / 6e-81 AT5G18940 436 / 5e-154 Mo25 family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0020 [flax] [poplar] TPR PF08569 [flax] [poplar] Mo25 Mo25-like
Representative CDS sequence Show only first row Show all	>Lus10027342 pacid=23145480 polypeptide=Lus10027342 locus=Lus10027342.g ID=Lus10027342.BGIv1.0 annot-version=v1.0 ATGAAGGGGATTTTCAAGAACAGGCCTCGAACTCCGGCGGACATTGTCCGCCAGGCCCGTGATATCCTTAATTATGTCGACCGCTCCTCCAATTATTCAA CCGACTTGCGCGACGGCAAGCGCGAAGAGAAGATGGTGGAGTTATCTAGAAATATTAGGGAGTTGAAGACGATACTTTATGGAAATAGTGAGGTAGAACC AGTGGCGGAAGCTTGTGCACAGTTAACTCAAGAGTTCTTCAAAGAGAACACACTACGGCTTTTCATCGTTTGTCTGCCAAAGTTAAATTTGGAGACCCGG AAAGACGCTACGCAAGTTGTTGCTAATTTACAGAGACAACAAGTTCAGTCTCGCTTAATTGCGTCTGATTATCTAGAAAACAATACAGATCTTCTCAATA TTCTGATAGCTGGTTATGGAATTCCGGATATGGCTTTACACTATGGTGCAATGTTGAGGGAGTGCATTCGTCACCAGAGTGTTGCACGATATGTCCTGGA GTCTGAAGAAATGAAGAAATTCTTCGATTATATACAGCTCCCAAATTTTGATATTGCTGCTGATGCTGCAGCAACTTTCAAGGAACTCCTAACAAGGCAT AAATCTACTGTTGCTGAATTCTTGTCGAAGAACTATGACTGGTTTTTTGCAGAATACAACTCGAAGTTGCTGGAATCTACCAACTACATAACGAGACGGC AGGCTGTCAAGCTTTTAGGCGATATATTACTGGACCGATCAAACTCGGCTGTGATGACACGATATGTGAGCTCAAGGGATAACTTAAGGATACTTATGAA TCTGCTTAGAGAATCAAGCAAGAGTATCCAGATAGAAGCATTTCATGTTTTCAAGCTCTTTGCAGCAAATCAAAATAAACCCGCCGACATTGTTAGCATA CTCCTAGCGAATCGAAGCAAGCTTCTTCGTCTGTTTGCGGATTTTAAGACGGAAAAAGAGGATGAACAATTTGAGGCAGACAAAGCCCAGGTGGTGAGAG AAATCGCAGCACTTGAACCCAAAGACAACTGA
AA sequence Show only first row Show all	>Lus10027342 pacid=23145480 polypeptide=Lus10027342 locus=Lus10027342.g ID=Lus10027342.BGIv1.0 annot-version=v1.0 MKGIFKNRPRTPADIVRQARDILNYVDRSSNYSTDLRDGKREEKMVELSRNIRELKTILYGNSEVEPVAEACAQLTQEFFKENTLRLFIVCLPKLNLETR KDATQVVANLQRQQVQSRLIASDYLENNTDLLNILIAGYGIPDMALHYGAMLRECIRHQSVARYVLESEEMKKFFDYIQLPNFDIAADAAATFKELLTRH KSTVAEFLSKNYDWFFAEYNSKLLESTNYITRRQAVKLLGDILLDRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVSI LLANRSKLLRLFADFKTEKEDEQFEADKAQVVREIAALEPKDN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G47540			Mo25 family protein (.1)		Lus10027342 [exp]	0	1
AT3G49870		ATARLA1C	ADP-ribosylation factor-like A...		Lus10019259 [exp]	12.0	0.8235
AT4G36380		ROT3	ROTUNDIFOLIA 3, Cytochrome P45...		Lus10041794 [exp]	13.0	0.8229
AT4G35410			Clathrin adaptor complex small...		Lus10003641 [exp]	13.7	0.8021
AT3G02740			Eukaryotic aspartyl protease f...		Lus10036430 [exp]	15.3	0.8058
AT2G41540		GPDHC1	6-phosphogluconate dehydrogena...		Lus10031052 [exp]	19.0	0.7940
AT3G11550		CASP2	Casparian strip membrane domai...		Lus10004205 [exp]	22.7	0.8145
AT5G43600		ATAAH-2, UAH	ARABIDOPSIS THALIANA ALLANTOAT...		Lus10022211 [exp]	23.0	0.7573
AT5G65960			GTP binding (.1)		Lus10016687 [exp]	23.4	0.8055
AT4G37030			unknown protein		Lus10011021 [exp]	23.6	0.8162
AT1G16890		UBC36 ,UBC13B	UBIQUITIN CONJUGATING ENZYME 1...		Lus10000353 [exp]	28.1	0.8022

Compare expression of checked genes

Lus10027342 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.