Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G59140 1949 / 0 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) AT3G21250 1158 / 0 ATMRP6, ABCC8 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) AT1G04120 1121 / 0 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) AT3G13080 1088 / 0 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) AT3G13090 1082 / 0 ATMRP8, ATABCC6 ATP-binding cassette C6, multidrug resistance-associated protein 8 (.1) AT3G13100 1066 / 0 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1) AT3G60160 1035 / 0 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) AT3G62700 998 / 0 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) AT2G47800 976 / 0 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) AT3G60970 915 / 0 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039320 [exp] 2821 / 0 AT3G59140 1991 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10017548 [exp] 1581 / 0 AT3G59140 1544 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10004896 [exp] 1202 / 0 AT3G21250 1727 / 0.0 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) Lus10022858 [exp] 1146 / 0 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10018027 [exp] 1022 / 0 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10042023 [exp] 1017 / 0 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10024965 [exp] 1013 / 0 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10011498 [exp] 979 / 0 AT2G47800 1796 / 0.0 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) Lus10023139 [exp] 914 / 0 AT3G62700 1659 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G023800 [exp] 2246 / 0 AT3G59140 1894 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.012G033500 [exp] 2207 / 0 AT3G59140 1948 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.012G033600 [exp] 2170 / 0 AT3G59140 1948 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.001G095600 [exp] 1796 / 0 AT3G59140 1639 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.003G135800 [exp] 1689 / 0 AT3G59140 1580 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.016G122901 [exp] 1296 / 0 AT3G59140 1144 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.003G034700 [exp] 1212 / 0 AT3G21250 1773 / 0.0 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) Potri.002G255800 [exp] 1144 / 0 AT1G04120 2361 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Potri.014G193400 [exp] 1142 / 0 AT1G04120 2323 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Potri.001G362300 [exp] 1116 / 0 AT3G13080 2008 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0241 [flax] [poplar] ABC_membrane PF00664 [flax] [poplar] ABC_membrane ABC transporter transmembrane region CL0023 [flax] [poplar] P-loop_NTPase PF00005 [flax] [poplar] ABC_tran ABC transporter
Representative CDS sequence Show only first row Show all	>Lus10027567 pacid=23144501 polypeptide=Lus10027567 locus=Lus10027567.g ID=Lus10027567.BGIv1.0 annot-version=v1.0 ATGGAGGGCTACTGGGAGATGTTCTGTGGGAAATCTGGAACTTCTCCTCAAGAAAGTGACTCAACAGCTTCTTCTTGTACCAGTCAAGCACTGGTCATTT GCTTTGATGTTCTACTTCTTGTCCTGCTCTTGTTCAACTTCATACCACCATCATCATCGTCCAAAATGCAGCGAGTTGGATTTCGAGGCATTCCAAAGCT GGGAATTTTATCTGCACTCTTCAATGGATGTCTTGGCCTTGTCTACTTGTGTTTAGGAGTATGGGATCTTGAAGAGAAGTTGCCAATGAAGTTGTGGCTG CCATTGTTCTTCCAAGCCTTAACATGGAGTTTGATGGGCTTACTCATAAGCCTTTTCGGAGCATCTCTTCCTAGATTCCGGATCAGGCTCCTCTCCATTT CCACATTGCTTTTTTCGGGAATCGTCTGTGGGATGTCTGTGTTTGCAGCAATCCTGAACAAGAGAATTGATGTCAAGATAACTGCAGATGTTCTAACATT TCCAGCAGCTTTGATGTTGATACTATGCGCTTATAACAAAGCGCATAGTAGCAGTGACGAAGAGATCGAGTCCGAAAATGGCAGCCTTTACACTCCTTTG AATGGCGAATCCAATGGCATTAGTGACGAGAAACATGAGAAAGCAACTCCATTTTCAAAAGCAGGGATCTTGGGAACTCTGTCATTTTGGTGGCTGAACC CTCTGATGAGATTAGGCAGGGAGAAGACTCTGGAGGAAGAGGATATTCCGAACCTGCGCCAGGCGGATCGAGCCGAAACTTGCTACATGGTTTTCCAGGA GCAGTTACGCAAGGAAGAGAAACAATCGCAACCATCACTGCTATGGACAATTGTGAGGTGCCATTCCAGAGACATTTTCATCTCCGGGTTCTTCGCCTTC CTGAAGATAGTTACAGCATCAGCAGGTCCACTGCTTCTCAACGCCTTTATACTGGTAGCTGAAGGAAACGCTAGTTTCCAATATGAAGGATATCTACTAG CGTTGACCCTTTTCTTCAGCAAGTCTTTGGAGTCCTTATCTCAAAGGCAATGGTACTTCAGGTCTAGACTCATCGGCTTAAAGATAAGGTCTTTACTCAC AGCTGCAATCTACAAGAAGCAACTGAAGCTGTCGAATGCCAGTAGATTAACCCACTCGGGAGGCGAGATAATGAACTATGTCACGGTAGATGCTTACCGA ATCGGCGAGTTCCCCTTTTGGTTTCACCAGACATGGACGACAAGCTTGCAGCTTTGCCTTTCGCTGATCATTCTCTTCCGAGCTGTTGGGTTGGCAACTT TTGCAGCCTTGGCGATCATAGTGCTGACCGTTTTGTGCAATGCTCCATTGGCTAAGCTGCAGCATAGGTTCCAAACCAGGCTCATGACGGCTCAGGATGA AAGGCTCAAGGCCTGTGGGGAGTCTCTGGTGAACATGAAGGTTCTGAAGCTGTATGCTTGGGAAACACACTTCAAAACTGTTATAGAGAAGTTGAGGGAA GTCGAATATACGTGGCTAAGAGCTGTGCAGTTGAGGAAGTCTTACAACAGTGTTCTGTTCTGGTCTTCTCCTGTTTTGGTCTCCACTGCAACTTTTGGTG CCTGTTACTTTCTCAAAGTTCCGCTCCATGCGAACAATGTCTTCACTTTCGTGGCGACGTTGAGGCTTGTTCAGGAACCTGTTAGGTCCATCCCTGACGT TATCGGCGTGGTGATCCAAGCGAAGGTGGCGTTTGCTCGGATTGTGAGGTTCCTCGAGGCTCCGGAGTTGGAGAATGTGAATGTCAGGGAAAAGAGCAAT CTGGGAGGAGGAGGAGTTGACAGCAGCCACCATGCCATTTCAATCAAGTCTGCAGATTTTTCATGGGAAGAGAAGAACTCTTTAAAGCCTACACTCAAGA ATGTGAATTTGGAAATCAGACCTGGTGCAAAGGTTGCCGTTTGTGGTGAAGTTGGCTCTGGGAAATCAACCCTTTTGGCAGCGATTCTCGGAGAGGTCCC AAACACTCGGGGAAATGTTCAGGTTCATGGCAGCATCGCCTATGTTTCCCAAACAGCTTGGATACAGACAGGAAGCATACAAGAGAATATCTTATTCGGG TCTGCGATGGATAAACAGAGATATCAAGACACTCTTGAAAGATGTTCATTGGTGAAGGATCTGGAGCTGCTGCCGTACAGGGATCTGACAGAGATCGGTG AGAGAGGAGTCAATCTGAGTGGTGGCCAGAAACAGCGTATTCAATTGGCTCGTGCACTTTACCAAGATGCTGATATTTACCTTCTGGATGATCCATTTAG TGCTGTGGATGCCCATACTGCTACAAGCCTGTTCAATGAATATGTTATGGAGGCACTCTCGACGAAGACAGTGTTTCTAGTGACCCATCAAGTAGACTTC TTACCTACGTTCGATGCTGTCCTGTTGATGTCAGATGGAGAAATCCTGCAAGCAGCTCCTTACCAAGAGTTATTGGCATCAAGCCAAGAGTTTCAGGATC TCGTCAACGCGCATAAGGAAACAGCTGGAGGGTCCGAAAGGCTTGCTGAAGTTACTGCTGCACAGAAACAAGGATCATCAACTTCCAAGGAGATCAAGAA AACTTACGTGGAAAACCAACAAAATCAGGTGGTAGCCAAAGGTGATCAACTGATTAAGCAGGAAGAAAGGGAAGTAGGGGACACAGGATTCAAGCCTTAC ATTCAGTACCTGAGTCAGAACAAAGGATACCTCTACTTCGCCTTAGCTGCCGCAAGTCACCTGATGTTTGTTGGTGGTCAGATATCACAGAACACATGGA TGGCTTCCAATGTTGACAATCCCAACACTTCAACGTTGAAGCTGATAGGAGTCTACTTGTTGATTGGAGTCGGGTCAGTTTTGTTTCTGCTTACCAGAGC TATGGCCACTGTTGTTTTGAATATGCAGTCTTCAAGGTCGCTGTTCACCCAGCTGCTGAATTCCCTATTCCGAGCGCCCATGTCGTTCTATGATTCTACA CCTCTTGGACGAATACTTAGTCGGGTATCTGCTGATCTTAGCATTGTGGATCTTGATGTACCCTTCTGCTTCATCTTTGCTGTTGGGGCGACTTCAAATG CTTATGCCAGTCTTGGAGTTCTTGCTGTTATCACTTGGCAAGTCTTGTTCGTGTCCATACCAATGATTTATCTGGCAATTCGCTTGCAGAAATACTACTT TTCATCTGCAAAAGAGTTCATGCGGATCAACGGGACAACAAAGTCTTATGTAGCAAATCATTTGGCAGAATCTGTAGCAGGGGCAGTAACGATACGAGCT TTCAGGCAGGAAGAACGTTTCTTCGCCAAAAGCTTACACCTAATCGACACAAATGCCAGCCCTTTCTTCCACAGTTTCACAGCAAACGAGTGGCTGATTC AAAGGTTGGAAACAATGTGCGCTGTCGTTCTTGCTTCTGCAGCTCTCTGCATGGTTTTGTTGCCTCCTGGGACTTTCAGCTCCGGGTTCATCGGAATGGC ACTCTCCTATGGTCTTTCCCTGAACATGTCCCTTGTTTTCTCGATCCAAAACCAGTGCACATTAGCAAACTACATCATCTCAGTTGAAAGGCTCAACCAA TACATGCACATACCAAGCGAAGCCCCTGAAGTTATTGAAGATAACCGTCCCTCTCCCTCCTGGCCATCAGTTGGAAAAGTTGAGATCTGTGACTTAAAGA TAAGGTATAGGCCTGATACACCACTGGTTCTCCGGGGTATCAGTTGCACGTTCCAGGGAGGGCACAAGATCGGTATTGTTGGCCGAACTGGAAGTGGGAA GACGACTCTCATCGGTGCCCTCTTCCGTCTGGTGGAGCCAGCAGGAGGAAAGATTGTTGTGGATGGTATTGACATATCCAAAATAGGGCTGCATGATCTT AGATCAAGATTCGGGATAATCCCTCAAGATCCAACTCTGTTCAATGGAACTGTAAGATACAACTTGGATCCTCTGGCTCAACACAGTGACCAGGAGATAT GGGAGGTTCTTGGGAAGTGTCAACTACGAGAGGTTGTCCAGGATAAGGAAGTGGGATTGGACTCCTTAGTAATGGAAGATGGATCAAACTGGAGCATGGG GCAGAGACAACTATTCTGCTTGGGCCGAGCGCTTCTAAGGAGAAGTAGAGTACTTGTGCTCGACGAGGCAACAGCTTCCATCGACAATGCAACCGACTCA ATATTGCAGAAAACCATCAGGACAGAGTTCGCAGACTGCACAGTCATCACAGTTGCTCACAGGATACCCACTGTCATGGACTGCACCATGGTGCTCGCCA TTAAAGACGGGAAACTGGTAGAGTATGATGAACCAATGAAGCTAATGAAGAGAGAAGGCTCACTTTTCGGACAGCTCGTTCAAGAGTACTGGTCTCATTC CCAATCCCCGTAG
AA sequence Show only first row Show all	>Lus10027567 pacid=23144501 polypeptide=Lus10027567 locus=Lus10027567.g ID=Lus10027567.BGIv1.0 annot-version=v1.0 MEGYWEMFCGKSGTSPQESDSTASSCTSQALVICFDVLLLVLLLFNFIPPSSSSKMQRVGFRGIPKLGILSALFNGCLGLVYLCLGVWDLEEKLPMKLWL PLFFQALTWSLMGLLISLFGASLPRFRIRLLSISTLLFSGIVCGMSVFAAILNKRIDVKITADVLTFPAALMLILCAYNKAHSSSDEEIESENGSLYTPL NGESNGISDEKHEKATPFSKAGILGTLSFWWLNPLMRLGREKTLEEEDIPNLRQADRAETCYMVFQEQLRKEEKQSQPSLLWTIVRCHSRDIFISGFFAF LKIVTASAGPLLLNAFILVAEGNASFQYEGYLLALTLFFSKSLESLSQRQWYFRSRLIGLKIRSLLTAAIYKKQLKLSNASRLTHSGGEIMNYVTVDAYR IGEFPFWFHQTWTTSLQLCLSLIILFRAVGLATFAALAIIVLTVLCNAPLAKLQHRFQTRLMTAQDERLKACGESLVNMKVLKLYAWETHFKTVIEKLRE VEYTWLRAVQLRKSYNSVLFWSSPVLVSTATFGACYFLKVPLHANNVFTFVATLRLVQEPVRSIPDVIGVVIQAKVAFARIVRFLEAPELENVNVREKSN LGGGGVDSSHHAISIKSADFSWEEKNSLKPTLKNVNLEIRPGAKVAVCGEVGSGKSTLLAAILGEVPNTRGNVQVHGSIAYVSQTAWIQTGSIQENILFG SAMDKQRYQDTLERCSLVKDLELLPYRDLTEIGERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTATSLFNEYVMEALSTKTVFLVTHQVDF LPTFDAVLLMSDGEILQAAPYQELLASSQEFQDLVNAHKETAGGSERLAEVTAAQKQGSSTSKEIKKTYVENQQNQVVAKGDQLIKQEEREVGDTGFKPY IQYLSQNKGYLYFALAAASHLMFVGGQISQNTWMASNVDNPNTSTLKLIGVYLLIGVGSVLFLLTRAMATVVLNMQSSRSLFTQLLNSLFRAPMSFYDST PLGRILSRVSADLSIVDLDVPFCFIFAVGATSNAYASLGVLAVITWQVLFVSIPMIYLAIRLQKYYFSSAKEFMRINGTTKSYVANHLAESVAGAVTIRA FRQEERFFAKSLHLIDTNASPFFHSFTANEWLIQRLETMCAVVLASAALCMVLLPPGTFSSGFIGMALSYGLSLNMSLVFSIQNQCTLANYIISVERLNQ YMHIPSEAPEVIEDNRPSPSWPSVGKVEICDLKIRYRPDTPLVLRGISCTFQGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGKIVVDGIDISKIGLHDL RSRFGIIPQDPTLFNGTVRYNLDPLAQHSDQEIWEVLGKCQLREVVQDKEVGLDSLVMEDGSNWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDS ILQKTIRTEFADCTVITVAHRIPTVMDCTMVLAIKDGKLVEYDEPMKLMKREGSLFGQLVQEYWSHSQSP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G59140		ATMRP14, ABCC10	ATP-binding cassette C10, mult...		Lus10027567 [exp]	0	1
AT2G47810	CCAAT	NF-YB5	"nuclear factor Y, subunit B5"...		Lus10036574 [exp]	10.2	0.7956
AT5G52410			unknown protein		Lus10026416 [exp]	13.6	0.8121
AT5G29000	GARP	PHL1	PHR1-like 1, Homeodomain-like ...		Lus10029607 [exp]	18.7	0.7770
AT1G22150		SULTR1;3	sulfate transporter 1;3 (.1)		Lus10036437 [exp]	20.0	0.8245
AT1G22150		SULTR1;3	sulfate transporter 1;3 (.1)		Lus10041111 [exp]	21.0	0.8143
AT5G28740			Tetratricopeptide repeat (TPR)...		Lus10003865 [exp]	42.2	0.7291
AT2G42430	AS2	ASL18, LBD16	ASYMMETRIC LEAVES2-LIKE 18, la...		Lus10014757 [exp]	42.5	0.7289
AT1G49790			F-box associated ubiquitinatio...		Lus10038938 [exp]	44.0	0.7948
AT2G36690			2-oxoglutarate (2OG) and Fe(II...		Lus10014398 [exp]	44.9	0.8055
AT3G22600			Bifunctional inhibitor/lipid-t...		Lus10010572 [exp]	49.2	0.8034

Compare expression of checked genes

Lus10027567 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.