Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G15550 103 / 1e-24 IAGLU indole-3-acetate beta-D-glucosyltransferase (.1) AT1G05530 99 / 3e-23 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1) AT1G05560 95 / 1e-21 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT4G14090 94 / 2e-21 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 86 / 1e-18 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G05675 81 / 8e-17 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 77 / 1e-15 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT4G15490 75 / 7e-15 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1) AT3G21560 75 / 1e-14 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1) AT2G23250 73 / 2e-14 UGT84B2 UDP-glucosyl transferase 84B2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015515 [exp] 138 / 5e-37 AT4G15550 379 / 3e-127 indole-3-acetate beta-D-glucosyltransferase (.1) Lus10021610 [exp] 134 / 2e-35 AT1G05560 372 / 6e-125 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) Lus10019989 [exp] 130 / 3e-34 AT4G15550 379 / 5e-127 indole-3-acetate beta-D-glucosyltransferase (.1) Lus10040591 [exp] 100 / 3e-25 AT4G14090 185 / 1e-56 UDP-Glycosyltransferase superfamily protein (.1) Lus10024118 [exp] 94 / 2e-21 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1) Lus10010712 [exp] 85 / 3e-18 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10027862 [exp] 83 / 1e-17 AT4G15480 414 / 3e-141 UDP-Glycosyltransferase superfamily protein (.1) Lus10006352 [exp] 80 / 2e-16 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10003809 [exp] 79 / 6e-16 AT1G05675 337 / 1e-111 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G236500 [exp] 108 / 2e-26 AT4G15550 436 / 3e-150 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.006G055600 [exp] 108 / 2e-26 AT4G15550 442 / 2e-152 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.017G101800 [exp] 105 / 2e-25 AT4G14090 369 / 3e-124 UDP-Glycosyltransferase superfamily protein (.1) Potri.002G236400 [exp] 103 / 8e-25 AT1G05560 442 / 1e-152 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) Potri.004G083700 [exp] 100 / 1e-23 AT4G14090 374 / 3e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.014G146000 [exp] 100 / 2e-23 AT4G15550 429 / 2e-147 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.016G052500 [exp] 99 / 4e-23 AT4G15550 419 / 3e-143 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.017G032300 [exp] 83 / 2e-17 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.015G071900 [exp] 82 / 3e-17 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.017G032500 [exp] 80 / 2e-16 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10027584 pacid=23151197 polypeptide=Lus10027584 locus=Lus10027584.g ID=Lus10027584.BGIv1.0 annot-version=v1.0 ATGAAAGACATTGTGGGTCATGTTCAACTCACACTCGAATGCCAGCTTATAAGCAAAAACCCTTTCCATATCACATCATACAATTCATTGAAGAAATGGA AACGACCACACCTTGAAGATCTTCTTCTGAATGGTCTTGGGGAGACAAACCTCCGCCGGAGACCAGTCGACCCGAAGACCCAGGCTCGTACGGGATCTCG TCGGAGGTGTTTTTGCAAAAAAAATCTTCGTCGGTGGAGTGGAACATGGCGTCGAATGAGTCATTGTTCAGCACCAACACGACCTTCACCAAGGAGAAAG CCTTCTTCCTTATCAATAAAGGGGGGCAAGCCTTCTTGCTCGCGACGAAATCTGGCGAAACCGGAAGCCTTGAAAACCATCCGAGATAAGCTTAACATCG TTGCGATTGGACCACTTATCTCCACAAACGTGGGGATCATTACAAAAGAAAACAGGAATGATGAGTACATGGGGTGGCTTGACTTGCAAGCCAAGGCATT AGTCGTATACGTTTCATTTGGAAAAATAGCAGTGTTATCTAAGGAGCAGAAAGAGGAAGTAGGGAGGGGGCTATTAAGGAGCGGAAAGCCATTCTTGTGG GTAATAAGGAAAGAAGAGGAAGGAAAAGAAGATGAGATGGTAAGATGGAGAGATGACTTGGAGAAGAAGGCATTGAAGAGAATAATAGAATGGTGTTCAC AAGTTGAGTTTGCAGATCAAGGGGCAAACGCGAAGCTGATTGAGGATGTGTGGAGGATAGGAGTTAGGGCGAAGGAAATAACTGGTGGGGAAATGGTGGA TGGAGCTGAGATAGGAAGGTGTTTAGATTTGGTAGTGGAAGAAGGTGAAGTGAGAGATGAAGTAAGGAGAAATGCAATAAGATGGAAGGAGCTTGCATGG GTTGTTGTTGCAGAGGGTTTAGGGCTTAAATAG
AA sequence Show only first row Show all	>Lus10027584 pacid=23151197 polypeptide=Lus10027584 locus=Lus10027584.g ID=Lus10027584.BGIv1.0 annot-version=v1.0 MKDIVGHVQLTLECQLISKNPFHITSYNSLKKWKRPHLEDLLLNGLGETNLRRRPVDPKTQARTGSRRRCFCKKNLRRWSGTWRRMSHCSAPTRPSPRRK PSSLSIKGGKPSCSRRNLAKPEALKTIRDKLNIVAIGPLISTNVGIITKENRNDEYMGWLDLQAKALVVYVSFGKIAVLSKEQKEEVGRGLLRSGKPFLW VIRKEEEGKEDEMVRWRDDLEKKALKRIIEWCSQVEFADQGANAKLIEDVWRIGVRAKEITGGEMVDGAEIGRCLDLVVEEGEVRDEVRRNAIRWKELAW VVVAEGLGLK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G15550		IAGLU	indole-3-acetate beta-D-glucos...		Lus10027584 [exp]	0	1
AT3G01650		RGLG1	RING domain ligase1 (.1)		Lus10015079 [exp]	1.7	0.9617
AT5G40960			Protein of unknown function (D...		Lus10032031 [exp]	2.4	0.8775
AT3G19620			Glycosyl hydrolase family prot...		Lus10002128 [exp]	4.5	0.9346
					Lus10029087 [exp]	5.3	0.8969
AT2G48060			unknown protein		Lus10029968 [exp]	6.7	0.8185
AT5G06060			NAD(P)-binding Rossmann-fold s...		Lus10016495 [exp]	6.9	0.8569
AT4G37870		PCK1, PEPCK	phosphoenolpyruvate carboxykin...		Lus10011582 [exp]	10.2	0.8379
AT2G47140		AtSDR5	short-chain dehydrogenase redu...		Lus10022760 [exp]	10.4	0.8534
AT4G25950		VATG3	vacuolar ATP synthase G3 (.1)		Lus10001543 [exp]	13.7	0.8651
AT5G10380		ATRING1, RING1	RING/U-box superfamily protein...		Lus10029456 [exp]	19.6	0.7208

Compare expression of checked genes

Lus10027584 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.