Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36780 436 / 2e-149 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 432 / 4e-148 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 432 / 5e-148 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT3G53150 431 / 1e-147 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT2G36750 429 / 6e-147 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36760 417 / 4e-142 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT3G53160 405 / 1e-137 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G36790 402 / 4e-136 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT2G15490 332 / 4e-109 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G15480 332 / 8e-109 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014402 [exp] 438 / 2e-150 AT2G36780 474 / 3e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10014404 [exp] 399 / 1e-134 AT2G36760 507 / 4e-177 UDP-glucosyl transferase 73C2 (.1) Lus10014437 [exp] 395 / 4e-133 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10014401 [exp] 390 / 4e-131 AT3G53150 537 / 0.0 UDP-glucosyl transferase 73D1 (.1) Lus10023894 [exp] 389 / 9e-131 AT2G36780 516 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10023893 [exp] 388 / 1e-130 AT2G36780 495 / 1e-172 UDP-Glycosyltransferase superfamily protein (.1) Lus10014403 [exp] 379 / 4e-127 AT2G36780 506 / 6e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 374 / 9e-125 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10016268 [exp] 369 / 5e-123 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G120600 [exp] 466 / 1e-161 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.012G048700 [exp] 457 / 5e-158 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.016G097400 [exp] 444 / 6e-152 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.001G302300 [exp] 377 / 1e-126 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.009G099032 [exp] 372 / 1e-124 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302400 [exp] 367 / 2e-122 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098400 [exp] 364 / 1e-121 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303000 [exp] 363 / 5e-121 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.002G123700 [exp] 362 / 1e-120 AT4G34131 446 / 3e-153 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 360 / 4e-120 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10027739 pacid=23156883 polypeptide=Lus10027739 locus=Lus10027739.g ID=Lus10027739.BGIv1.0 annot-version=v1.0 ATGGCTTCCCAAAACTCCCCTACTCCTCCTCACTTCCTCCTCGTCCCTCTACTCGGTCCGGGTCGCCACATCCCGATGGTCGACATCGCAAGACTGCTGG CTCAGCACGGCGCAACGGTCACCTTAGTCACCACCCCGCTCAACTCGTCTCAATTTTGCAAGACAATCCAAAACGACGCCTTTTTAGGCCTCCAGATCCG GATCTTGGAGCTCCCCTTTGCGGGCCATGAGTTAGGCCTTCCCTTTGGGTGCGAGAGCATAGAGACCCTGCCCAGGGATCCGGGGTCTGCCAGGATTTTC TACGCCGCAATCGATCGGTTTCAAGAACCGGTCGAGCGGTACTTGAAAGTGGTCGAACCCAGACCGACATGCATTGTGTCAGACGAACGGATTGTCTGGA CGGTGGCCACGAGCCGCAAGTTTGGCATCCCGAGGCTGGTCTTCGACGGAATGAGCTGTTTCGCCGTGGCATGCTCCCACAACATACTAGTTTCAAAGAT TTCCGAGACTATCTCCTCGGATCGCGAGTCGTTTTTGGTCCCCGGATTACCCGACCGGATCCGGCTGACCCGGGCCCAACTTCCGGTCCAGTTCAATTCC AGTTCGCTCAAACTAAGCGAGCTTTTCGATAAAATGATGGAGGCAGAGGAACAGTCGTTCGGACGGATAGTCAACTCGTTCGAAGGACTCGAACCGGCCT ACGTGGAGATGAACCGGCGGCAATCAAAGAAGGTGTACTGCATTGGTCCGGTCTCCCTGCGAAATCGGAACAACTCGGATCGGGCAATGAGAGTAAGCAA CAAATCTGGCATTGGGGAAACAGAGTGTTTGAAATGGCTGGACCAATGGCCTAGTGGTTCGGTTGTCTATGTTTGCTTAGGGACACTCAGCCGCCTTGGA GTTGAGCAGCTTATGGAGCTCGGACTCGGTTTGGAAGCTTCAGGTAGACCGTTCGTATGGGTAATAAGGGAACCTGACCGGGTCGATCAGCTGAAGAAGC TCATGGTTTCAGAGGGTTTCGAGGAAAGAACAAGGGGGAGAAGCCTTTTGGTTTGGGGTTGGGCACCACAGGTGCTTATACTGTCTCACCCTGCAATCGG AGGATTCCTGACGCATTGCGGGTGGAACTCGATCCTGGAAGGAATCAGTGCCGGTGTGACAATGGTCACGTGGCCGCTGCTCGCGGAACAGTTCTACAAT GAGAAGTTTGTTGTAGAAGTGTTGGGGATAGGGCTGAGTTTGGGAGCGGAAGTGGGGATGAAATGGGGAGAGGAAGACAAATATGGAGTCGTGGTGAAAA GGGGTACAATCGGAGAAGTCGTCGGAAAATTGCTAGACGAAGGAGAAAAAGGGCGAGAGAGGAGGAAGAGAGCGAGGAAATTGTCGAAAATGGCCATGGA ATCTGTCGAGGAAGGTGGTTCTTCTTACCTCAACATTGGTAACTTGATCAACGATGTTGTGTAA
AA sequence Show only first row Show all	>Lus10027739 pacid=23156883 polypeptide=Lus10027739 locus=Lus10027739.g ID=Lus10027739.BGIv1.0 annot-version=v1.0 MASQNSPTPPHFLLVPLLGPGRHIPMVDIARLLAQHGATVTLVTTPLNSSQFCKTIQNDAFLGLQIRILELPFAGHELGLPFGCESIETLPRDPGSARIF YAAIDRFQEPVERYLKVVEPRPTCIVSDERIVWTVATSRKFGIPRLVFDGMSCFAVACSHNILVSKISETISSDRESFLVPGLPDRIRLTRAQLPVQFNS SSLKLSELFDKMMEAEEQSFGRIVNSFEGLEPAYVEMNRRQSKKVYCIGPVSLRNRNNSDRAMRVSNKSGIGETECLKWLDQWPSGSVVYVCLGTLSRLG VEQLMELGLGLEASGRPFVWVIREPDRVDQLKKLMVSEGFEERTRGRSLLVWGWAPQVLILSHPAIGGFLTHCGWNSILEGISAGVTMVTWPLLAEQFYN EKFVVEVLGIGLSLGAEVGMKWGEEDKYGVVVKRGTIGEVVGKLLDEGEKGRERRKRARKLSKMAMESVEEGGSSYLNIGNLINDVV

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10027739 [exp]	0	1
AT1G73990		SPPA1, SPPA	signal peptide peptidase (.1)		Lus10013333 [exp]	1.4	0.9460
AT1G58170			Disease resistance-responsive ...		Lus10017231 [exp]	1.4	0.9421
					Lus10036060 [exp]	2.4	0.9072
AT5G26830			Threonyl-tRNA synthetase (.1)		Lus10030645 [exp]	3.3	0.8887
AT5G45890		SAG12	senescence-associated gene 12 ...		Lus10032406 [exp]	3.5	0.9196
AT1G08080		ATACA7, ACA7	A. THALIANA ALPHA CARBONIC ANH...		Lus10016105 [exp]	4.0	0.9127
AT3G49601			unknown protein		Lus10034691 [exp]	6.0	0.8953
AT4G12545			Bifunctional inhibitor/lipid-t...		Lus10024624 [exp]	8.9	0.9094
					Lus10040440 [exp]	8.9	0.8624
AT4G27290			S-locus lectin protein kinase ...		Lus10034815 [exp]	9.5	0.8902

Compare expression of checked genes

Lus10027739 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.