Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G01090 148 / 2e-41 Concanavalin A-like lectin family protein (.1) AT3G09190 121 / 3e-31 Concanavalin A-like lectin family protein (.1) AT3G09035 96 / 3e-22 Concanavalin A-like lectin family protein (.1) AT5G03350 52 / 2e-07 Legume lectin family protein (.1) AT5G03140 52 / 4e-07 Concanavalin A-like lectin protein kinase family protein (.1) AT3G54080 51 / 6e-07 Concanavalin A-like lectin family protein (.1) AT1G53080 49 / 2e-06 Legume lectin family protein (.1) AT5G42120 47 / 2e-05 Concanavalin A-like lectin protein kinase family protein (.1) AT4G02410 45 / 7e-05 Concanavalin A-like lectin protein kinase family protein (.1) AT3G55550 42 / 0.0007 Concanavalin A-like lectin protein kinase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035542 [exp] 582 / 0 AT5G01090 175 / 1e-51 Concanavalin A-like lectin family protein (.1) Lus10021117 [exp] 287 / 8e-95 AT5G01090 210 / 5e-65 Concanavalin A-like lectin family protein (.1) Lus10017194 [exp] 272 / 8e-89 AT5G01090 219 / 3e-68 Concanavalin A-like lectin family protein (.1) Lus10040276 [exp] 48 / 1e-05 AT3G55550 750 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1) Lus10004709 [exp] 46 / 2e-05 AT3G55550 257 / 1e-80 Concanavalin A-like lectin protein kinase family protein (.1) Lus10029769 [exp] 45 / 8e-05 AT5G42120 651 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G107200 [exp] 241 / 5e-77 AT5G01090 230 / 9e-73 Concanavalin A-like lectin family protein (.1) Potri.006G094900 [exp] 241 / 6e-77 AT5G01090 265 / 2e-86 Concanavalin A-like lectin family protein (.1) Potri.010G194700 [exp] 122 / 1e-31 AT5G01090 117 / 5e-30 Concanavalin A-like lectin family protein (.1) Potri.001G368300 [exp] 45 / 0.0001 AT5G55830 853 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1) Potri.010G200600 [exp] 44 / 0.0001 AT3G55550 707 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0004 [flax] [poplar] Concanavalin PF00139 [flax] [poplar] Lectin_legB Legume lectin domain
Representative CDS sequence Show only first row Show all	>Lus10027751 pacid=23157009 polypeptide=Lus10027751 locus=Lus10027751.g ID=Lus10027751.BGIv1.0 annot-version=v1.0 ATGGCCATTTCCTACTTCAAACTCCTCATCATCTTCTTCTTCCACCTCAATCTGCTGCTTGCAGTACTTGCAGACCCAGTAACCCCCTCATTCTCCTTCA CAAATTTCGACAAAGATCCAAACTTTGGTTCCACCCTTTCACTTTACGGCGATGCAAAGGTCTTCGCCGCTAATGGGCCTTATTCTTCTCCACCTCACAT TCAACTCTCCAGTGCTGGCGGCCAAGTCATGTACAAGAAACCCATCAAGCTCCTCCAAGGTAGTAGCAGAGATTTCACATCTTTCTCAACTTACTTCTCC TTTCTTATCCCCCCAGATAGCGTCCTGTCTCTGATTCTAGTCCCCAGTGTCGAATTCAACTCCAGTGTATTGGCTAGCAACACTCCCTTTGGGGTCGGGA ATAGGTTAAATTGGACTGGAATCATTGCTGTTGAATTTGGTGCTTTGAATGATGCCAAATATGGAGACTTGGAAAAAGGTCGGTTCTTTTCATTAAAGTT GAGGCACTATCCATCTGCTAAAGCAATGTTGAGCAGTGGCAAGAGGCTGCATGCATGGGTTGATTGTTCTTCAAACAGATTGGAAGTCCGGTTGAGTGAA TCTGGGGAAGTCAAACCAGTTGACCCTCTTGTTTTTGCCCAAATTGGTTTCTCAAGGATGTGGTCTATGTGGAGTAGTATTAGTGATGAAGTTATGTTAG GTTTGAGTTCTTCTTCTTCTTCCAATGCATCAGAAAGTTGTTTCCTTTACTCTTGGAGCTTCCAGATGAGAAGTTACCCTCACTGGATGCATTCTCAGCC TCTGGATCCAAATGGTTTCCATTCAGAACTGAAACCAATGGTTGTAAATGTGAGAAGAGGAGGAGACTATGTTGTTATGTGGGTGATTGCTGCTTTGATC TTAGGAGTTGGGTGTGGAGCTTTTGGGGCATTCATGGGGATCAATCTTTGCACCATGTTTAGTAACAGGAGGCCAGATGAATGTTCTTCATCTTGTTCAG TTGTTCATCCTATGGATTTTGAGTATGAGAAAGTCAAAGTGGTGGTTGTGGAGGATACTAAAGTGTTTGAAGATCATGGAAAGCAGTGTGAGTAG
AA sequence Show only first row Show all	>Lus10027751 pacid=23157009 polypeptide=Lus10027751 locus=Lus10027751.g ID=Lus10027751.BGIv1.0 annot-version=v1.0 MAISYFKLLIIFFFHLNLLLAVLADPVTPSFSFTNFDKDPNFGSTLSLYGDAKVFAANGPYSSPPHIQLSSAGGQVMYKKPIKLLQGSSRDFTSFSTYFS FLIPPDSVLSLILVPSVEFNSSVLASNTPFGVGNRLNWTGIIAVEFGALNDAKYGDLEKGRFFSLKLRHYPSAKAMLSSGKRLHAWVDCSSNRLEVRLSE SGEVKPVDPLVFAQIGFSRMWSMWSSISDEVMLGLSSSSSSNASESCFLYSWSFQMRSYPHWMHSQPLDPNGFHSELKPMVVNVRRGGDYVVMWVIAALI LGVGCGAFGAFMGINLCTMFSNRRPDECSSSCSVVHPMDFEYEKVKVVVVEDTKVFEDHGKQCE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G01090			Concanavalin A-like lectin fam...		Lus10027751 [exp]	0	1
AT1G03080			kinase interacting (KIP1-like)...		Lus10006607 [exp]	6.3	0.7252
AT3G04470			Ankyrin repeat family protein ...		Lus10032775 [exp]	10.1	0.7450
AT4G26620			Sucrase/ferredoxin-like family...		Lus10016627 [exp]	11.0	0.7176
AT2G26110			Protein of unknown function (D...		Lus10024988 [exp]	12.7	0.7562
AT5G67260		CYCD3;2	CYCLIN D3;2 (.1)		Lus10019317 [exp]	13.9	0.7266
AT5G60800			Heavy metal transport/detoxifi...		Lus10016133 [exp]	21.5	0.7113
AT2G29380		HAI3	highly ABA-induced PP2C gene 3...		Lus10001832 [exp]	32.2	0.6893
AT2G19690		PLA2-BETA	phospholipase A2-beta (.1.2)		Lus10028189 [exp]	32.8	0.6991
AT1G42960			unknown protein		Lus10016034 [exp]	34.4	0.6869
AT5G63650		SNRK2-5, SNRK2....	SNF1-RELATED PROTEIN KINASE 2H...		Lus10004291 [exp]	34.6	0.6062

Compare expression of checked genes

Lus10027751 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.