Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G49690 509 / 5e-179 UDP-Glycosyltransferase superfamily protein (.1) AT5G65550 377 / 5e-127 UDP-Glycosyltransferase superfamily protein (.1) AT2G22590 339 / 4e-112 UDP-Glycosyltransferase superfamily protein (.1) AT5G54060 192 / 1e-55 UF3GT UDP-glucose:flavonoid 3-o-glucosyltransferase (.1) AT5G54010 189 / 1e-54 UDP-Glycosyltransferase superfamily protein (.1) AT4G27570 187 / 6e-54 UDP-Glycosyltransferase superfamily protein (.1) AT4G27560 186 / 1e-53 UDP-Glycosyltransferase superfamily protein (.1) AT2G22930 180 / 2e-51 UDP-Glycosyltransferase superfamily protein (.1) AT1G64910 176 / 9e-50 UDP-Glycosyltransferase superfamily protein (.1) AT5G53990 175 / 2e-49 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012726 [exp] 326 / 5e-107 AT2G22590 471 / 3e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10025711 [exp] 322 / 3e-105 AT2G22590 473 / 2e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10035951 [exp] 310 / 1e-100 AT2G22590 464 / 3e-161 UDP-Glycosyltransferase superfamily protein (.1) Lus10042242 [exp] 227 / 1e-70 AT5G65550 280 / 9e-92 UDP-Glycosyltransferase superfamily protein (.1) Lus10008453 [exp] 199 / 2e-58 AT5G54010 539 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10003154 [exp] 191 / 3e-55 AT5G54010 318 / 3e-104 UDP-Glycosyltransferase superfamily protein (.1) Lus10013337 [exp] 185 / 5e-53 AT5G54010 452 / 1e-156 UDP-Glycosyltransferase superfamily protein (.1) Lus10043445 [exp] 175 / 5e-49 AT5G65550 225 / 3e-68 UDP-Glycosyltransferase superfamily protein (.1) Lus10004381 [exp] 171 / 2e-47 AT5G54060 437 / 1e-150 UDP-glucose:flavonoid 3-o-glucosyltransferase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G184400 [exp] 533 / 0 AT5G49690 549 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G182575 [exp] 389 / 2e-131 AT5G49690 468 / 7e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.012G034100 [exp] 380 / 4e-128 AT2G22590 505 / 2e-177 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G030600 [exp] 377 / 8e-127 AT2G22590 537 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.002G162300 [exp] 300 / 8e-97 AT2G22590 372 / 6e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G042800 [exp] 295 / 4e-95 AT5G49690 377 / 3e-127 UDP-Glycosyltransferase superfamily protein (.1) Potri.014G088400 [exp] 286 / 5e-91 AT2G22590 374 / 4e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G182650 [exp] 233 / 1e-73 AT5G65550 254 / 4e-82 UDP-Glycosyltransferase superfamily protein (.1) Potri.011G061000 [exp] 206 / 7e-61 AT5G54010 468 / 6e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.011G097900 [exp] 202 / 2e-59 AT5G54010 498 / 1e-174 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10027850 pacid=23156893 polypeptide=Lus10027850 locus=Lus10027850.g ID=Lus10027850.BGIv1.0 annot-version=v1.0 ATGGCGACGAACCCCAACAGCAGCTCTGCTGCTAAACTGGAAATCGTAATATTCCCATGGCTAGCAATGGGTCACTTGATCCCCTTCCTCCACCTCTCCA AGCTCTTAGCTCAAAACGGCCACAAAATCCACTTCGTCTCCACTCCCAGAAACCTCTCCAGACTACCCAAACTACCCCTCCGCCTCTCCTCCCAAATTAC CTTCGTGCCCTTCCCATTACCGCCCGTCCCCAACCTACCTCCGGAAGCAGAATCCTCCATGGACGTCCCTTACAACCACCAGCAGCTCCTCAAGAAGGCC TTCGACTCCCTCCGTCCTCCATTGACAAACTTCCTTCGCGAGCTGAAGCCCGATTGGATCATCTACGACTACGCCTCTCACTGGCTTCCTTCCGCCGCCG GCGGTATCGGCTGCGCTTTCTTCAGTCTCTTCACTGCGGCGACGCTCTGCTTCGTCGGGCCGCCTGGAAGACTCGTTGGCGGAGATTCAAGACGGAGCGC GGAGGATTTCACGGCGGTCCCTGATTGGATTCCGATTGAAATGAAATCGAATATCGCGTATCGTCTCCACGAAGTTTCCAAGTATGTGGAGAAGACCGAT GAGGATACCTCCGGCCCTTCCGATCAGATCCGGTTCGCCGTCGCGATGGAGGAGAGCGACGCCTTGCTCGTCAGAAGCTCGCCGGAGTTTGAACCTGAGT GGTTTGAACTTCTCGGTCAGATGTACAAGGGAAAGACGATTATACCCGTAGGATTCCTCCCGCCGCCAATTGAAGAAAAAGACGAGGATCAAAGCGACGC CGTATGGGGGAAGATTCGAGATTGGTTAGACAAGCAGCAGGGCAACTCGGTCGTGTACGTCGCGTTGGGAACGGAGGCGGCGCTGACTCGGGACGAGATC GCCGAGTTAGCATCGGGACTCGAGAAGTCCGGGCTGCCATTCTTCTGGGCACTGAGGGATCACTCCGGGTCGGGTCGGATGATGCTGTCCGGCGGGTTCG AGGAGCGGGTGAAGGGGCGAGGGATTGTGTACAGGGAGTGGGTTCCGCAGGTGAGGATACTGAGTCACGACTCTGTCGGCGGGTTTCTGACTCACTGCGG GTACAACTCGGTGGTGGAAGCGCTGGCGTTCGGCCGGGTTTTGATTTTGTTTCCGGTGATAAATGACCAGGGGCTGAATGCGAGGTTGTTGGAAGGGAAG AAGCTTGGGATTGAGATTCCGAGGGAGGAGAAGGATGGATCGTTTACGAGCGACGCGGTGGCGGAGACGGTGAAGGCGGCGGTGGTTGGTGAGTCAGGGG AGGCGTGGAGGAGGGCTGTGAAGGGTGCTAAGGGGTTGTTTGGAGGGAGGGAGAAGAATGGTGAAATGGTGGATGCGCTTGTACGTTATCTAACTGAGAA TAAGAGGAATGGATGA
AA sequence Show only first row Show all	>Lus10027850 pacid=23156893 polypeptide=Lus10027850 locus=Lus10027850.g ID=Lus10027850.BGIv1.0 annot-version=v1.0 MATNPNSSSAAKLEIVIFPWLAMGHLIPFLHLSKLLAQNGHKIHFVSTPRNLSRLPKLPLRLSSQITFVPFPLPPVPNLPPEAESSMDVPYNHQQLLKKA FDSLRPPLTNFLRELKPDWIIYDYASHWLPSAAGGIGCAFFSLFTAATLCFVGPPGRLVGGDSRRSAEDFTAVPDWIPIEMKSNIAYRLHEVSKYVEKTD EDTSGPSDQIRFAVAMEESDALLVRSSPEFEPEWFELLGQMYKGKTIIPVGFLPPPIEEKDEDQSDAVWGKIRDWLDKQQGNSVVYVALGTEAALTRDEI AELASGLEKSGLPFFWALRDHSGSGRMMLSGGFEERVKGRGIVYREWVPQVRILSHDSVGGFLTHCGYNSVVEALAFGRVLILFPVINDQGLNARLLEGK KLGIEIPREEKDGSFTSDAVAETVKAAVVGESGEAWRRAVKGAKGLFGGREKNGEMVDALVRYLTENKRNG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G49690			UDP-Glycosyltransferase superf...		Lus10027850 [exp]	0	1
AT1G62300	WRKY	ATWRKY6, WRKY6	WRKY family transcription fact...		Lus10030040 [exp]	2.4	0.9473
AT3G21690			MATE efflux family protein (.1...		Lus10027169 [exp]	3.7	0.9316
AT4G27420		ABCG9	ATP-binding cassette G9, ABC-2...		Lus10025596 [exp]	5.1	0.9255
AT5G10820			Major facilitator superfamily ...		Lus10026890 [exp]	5.5	0.9397
					Lus10005397 [exp]	5.9	0.9377
					Lus10021752 [exp]	8.4	0.9035
AT3G16170		AAE13	acyl activating enzyme 13, AMP...		Lus10025801 [exp]	9.6	0.8976
AT4G18360			Aldolase-type TIM barrel famil...		Lus10023302 [exp]	9.9	0.9428
AT3G08840			D-alanine--D-alanine ligase fa...		Lus10001259 [exp]	11.3	0.8873
AT4G21390		B120	S-locus lectin protein kinase ...		Lus10006742 [exp]	12.0	0.9392

Compare expression of checked genes

Lus10027850 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.