Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G34131 81 / 1e-17 UGT73B3 UDP-glucosyl transferase 73B3 (.1) AT2G15480 77 / 2e-16 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT4G34135 69 / 1e-13 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT4G34138 69 / 1e-13 UGT73B1 UDP-glucosyl transferase 73B1 (.1) AT2G15490 67 / 4e-13 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G36750 64 / 6e-12 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36790 64 / 9e-12 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT2G36800 62 / 5e-11 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36780 61 / 8e-11 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 57 / 1e-09 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019835 [exp] 79 / 1e-16 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2) Lus10014083 [exp] 78 / 2e-16 AT4G34131 489 / 2e-170 UDP-glucosyl transferase 73B3 (.1) Lus10014081 [exp] 75 / 2e-16 AT2G15490 109 / 3e-28 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019832 [exp] 74 / 3e-15 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014086 [exp] 74 / 3e-15 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014084 [exp] 71 / 5e-14 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10016268 [exp] 67 / 6e-13 AT2G36780 498 / 1e-173 UDP-Glycosyltransferase superfamily protein (.1) Lus10023939 [exp] 66 / 2e-12 AT2G36780 485 / 7e-169 UDP-Glycosyltransferase superfamily protein (.1) Lus10014438 [exp] 65 / 2e-12 AT2G36780 206 / 2e-63 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G098400 [exp] 90 / 1e-20 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G099032 [exp] 84 / 1e-18 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302400 [exp] 83 / 3e-18 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098966 [exp] 74 / 2e-15 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303000 [exp] 73 / 5e-15 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303600 [exp] 73 / 5e-15 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303300 [exp] 72 / 1e-14 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303700 [exp] 72 / 1e-14 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G302300 [exp] 67 / 5e-13 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1) Potri.002G123700 [exp] 61 / 7e-11 AT4G34131 446 / 3e-153 UDP-glucosyl transferase 73B3 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10027880 pacid=23156976 polypeptide=Lus10027880 locus=Lus10027880.g ID=Lus10027880.BGIv1.0 annot-version=v1.0 ATGGATACCACCGACCCGAGCCGAAAGCTCCATATCATCTTCCTCCCGTTCATGACATACGGCCACATGATTCCGATGATCGACATCGCCAAGCTCTTCG CCGCTCAGGGAGTCAAATCCACCGTCGTCACCACTCCACTCAACGCCCACCTCTTCTCCAACCAAAAACAAAACCTCCTCCGGCGTCGAAGTCCGGCTCA TCCTGTTCCCCGCCGCGGTAGTTGGGCTGCCGGAGTAATCGGAGTCCGCCGACTTCATCTCCTCCAACGCAAAGCGGCTGGATCCGGATTTCGTCGCCAG ATTTCTCCGCGCCATCGGCCTCCTCCGCGGGGCCATGGAGGAACTCATCGGCGCGACCCGACCAGACTGCCTCGTCGCCGACCTGAACTTCTCGTGGGCC GTCGAGTCCACGGTGCGGTTCGGAATCCCGGCAGTGTTCTTCCACGGGACGGGATACTTCCCGCCTGCGTGCTGGAGTGCATCCGGAACCACAAGCCGTA CCAAAACGTCTCGTCGGATTCGGATCCGTTGGTGGTTCCAGGCCTGTCGGGTAGAATCGAGTTCACCCGGAACCAGCTGCAGGAGTCGGCGGTGAAGGAG AAAGCTGAAAGGGGCAGAGGAGCGGCGGATCTCGATTCCTGCCTGGAGTAG
AA sequence Show only first row Show all	>Lus10027880 pacid=23156976 polypeptide=Lus10027880 locus=Lus10027880.g ID=Lus10027880.BGIv1.0 annot-version=v1.0 MDTTDPSRKLHIIFLPFMTYGHMIPMIDIAKLFAAQGVKSTVVTTPLNAHLFSNQKQNLLRRRSPAHPVPRRGSWAAGVIGVRRLHLLQRKAAGSGFRRQ ISPRHRPPPRGHGGTHRRDPTRLPRRRPELLVGRRVHGAVRNPGSVLPRDGILPACVLECIRNHKPYQNVSSDSDPLVVPGLSGRIEFTRNQLQESAVKE KAERGRGAADLDSCLE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G34135		UGT73B2	UDP-glucosyltransferase 73B2 (...		Lus10027880 [exp]	0	1
AT4G27890			HSP20-like chaperones superfam...		Lus10027048 [exp]	2.2	0.8358
AT4G33270		AtCDC20.1, CDC2...	cell division cycle 20.1, Tran...		Lus10034687 [exp]	2.4	0.8146
AT1G14040			EXS (ERD1/XPR1/SYG1) family pr...		Lus10037147 [exp]	6.8	0.8180
AT2G17230		EXL5	EXORDIUM like 5 (.1)		Lus10026548 [exp]	10.7	0.7975
AT1G14040			EXS (ERD1/XPR1/SYG1) family pr...		Lus10036779 [exp]	12.3	0.8029
AT4G05160			AMP-dependent synthetase and l...		Lus10027377 [exp]	12.4	0.7744
AT3G12350			F-box family protein (.1.2)		Lus10010606 [exp]	13.3	0.7320
AT1G03390			HXXXD-type acyl-transferase fa...		Lus10033079 [exp]	19.7	0.7815
AT5G27270		EMB976	EMBRYO DEFECTIVE 976, Tetratri...		Lus10015739 [exp]	23.0	0.8028
AT3G54810	GATA	GATA8, BME3, BM...	GATA TRANSCRIPTION FACTOR 8, B...		Lus10009227 [exp]	24.9	0.7653

Compare expression of checked genes

Lus10027880 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.