Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G53390 223 / 3e-67 O-acyltransferase (WSD1-like) family protein (.1) AT3G49200 199 / 6e-58 O-acyltransferase (WSD1-like) family protein (.1) AT3G49210 192 / 2e-55 O-acyltransferase (WSD1-like) family protein (.1) AT1G72110 190 / 9e-55 O-acyltransferase (WSD1-like) family protein (.1), O-acyltransferase (WSD1-like) family protein (.2) AT3G49190 186 / 8e-53 O-acyltransferase (WSD1-like) family protein (.1) AT5G22490 184 / 2e-52 O-acyltransferase (WSD1-like) family protein (.1) AT5G53380 183 / 4e-52 O-acyltransferase (WSD1-like) family protein (.1) AT5G16350 181 / 4e-51 O-acyltransferase (WSD1-like) family protein (.1) AT5G12420 165 / 2e-45 O-acyltransferase (WSD1-like) family protein (.1) AT2G38995 160 / 1e-43 O-acyltransferase (WSD1-like) family protein (.1), O-acyltransferase (WSD1-like) family protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002836 [exp] 270 / 2e-89 AT5G53390 96 / 2e-23 O-acyltransferase (WSD1-like) family protein (.1) Lus10014075 [exp] 258 / 1e-83 AT5G53390 156 / 5e-45 O-acyltransferase (WSD1-like) family protein (.1) Lus10019840 [exp] 253 / 1e-81 AT3G49200 155 / 2e-44 O-acyltransferase (WSD1-like) family protein (.1) Lus10009718 [exp] 188 / 1e-53 AT3G49200 532 / 0.0 O-acyltransferase (WSD1-like) family protein (.1) Lus10004008 [exp] 178 / 1e-49 AT5G53390 475 / 2e-164 O-acyltransferase (WSD1-like) family protein (.1) Lus10033680 [exp] 126 / 2e-31 AT3G49210 175 / 9e-49 O-acyltransferase (WSD1-like) family protein (.1) Lus10017721 [exp] 124 / 9e-31 AT3G49210 170 / 5e-47 O-acyltransferase (WSD1-like) family protein (.1) Lus10017718 [exp] 120 / 2e-29 AT3G49190 187 / 4e-53 O-acyltransferase (WSD1-like) family protein (.1) Lus10033678 [exp] 105 / 4e-24 AT3G49190 166 / 2e-45 O-acyltransferase (WSD1-like) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G304600 [exp] 474 / 9e-165 AT3G49200 263 / 4e-82 O-acyltransferase (WSD1-like) family protein (.1) Potri.012G014200 [exp] 224 / 3e-67 AT5G53390 559 / 0.0 O-acyltransferase (WSD1-like) family protein (.1) Potri.019G070900 [exp] 164 / 4e-45 AT5G53390 446 / 2e-153 O-acyltransferase (WSD1-like) family protein (.1) Potri.019G070975 [exp] 151 / 3e-40 AT5G53390 427 / 4e-146 O-acyltransferase (WSD1-like) family protein (.1) Potri.007G139600 [exp] 138 / 1e-35 AT3G49190 197 / 4e-57 O-acyltransferase (WSD1-like) family protein (.1) Potri.017G010300 [exp] 136 / 6e-35 AT3G49190 182 / 2e-51 O-acyltransferase (WSD1-like) family protein (.1) Potri.017G010500 [exp] 134 / 3e-34 AT3G49190 216 / 2e-64 O-acyltransferase (WSD1-like) family protein (.1) Potri.013G085101 [exp] 126 / 2e-31 AT3G49190 182 / 2e-51 O-acyltransferase (WSD1-like) family protein (.1) Potri.017G010700 [exp] 122 / 5e-30 AT3G49190 196 / 1e-56 O-acyltransferase (WSD1-like) family protein (.1) Potri.005G236901 [exp] 52 / 2e-08 ND /
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0149 [flax] [poplar] CoA-acyltrans PF03007 [flax] [poplar] WES_acyltransf Wax ester synthase-like Acyl-CoA acyltransferase domain CL0149 [flax] [poplar] PF06974 [flax] [poplar] WS_DGAT_C WS/DGAT C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10027887 pacid=23156912 polypeptide=Lus10027887 locus=Lus10027887.g ID=Lus10027887.BGIv1.0 annot-version=v1.0 ATGAAATGCAACACCTCCAGGGATCCTCTAATCGACGACGATGACCACGAATTCGGCGACGAGCCTCTGTCCCCCGCCGGACGGTTGTTCCTCCGTCCGG AGATCGACACGGTAATCCACACCGTCATCGGAGTAACGCAATTCGTAGAACTCGACGCCATCAAGGAAATCATAAGAGACTCATTGATGCTCGAGCACCC GCGCTTCTGCAGCCTCTTCGTCCGCGGACGTGGTGGAGAAGAGCGCTGGCGGAGGACGGAGCTCGACATCGACCGCCACGTCATCACCGTCGACACGAAG GATCGGCGGCGGCGAATCGGCGACGACGATCCCGAGAGGACGGTGAACGACTATGCGGCGGATCTGTCGGTGAGCTCGCCGCTGAGCCTCGACAAACCGC TGTGGGAGATCCACATCCTGCCGGCGGAGAAGTGCGCTGTGTTCAGGGTCCACCACGCCTTGGGCGACGGGATCTCGTTGATGTCATTGCTCCTCGCGAA CTGCCGGAAGGCGGACGATCCGGAGGCTCTTCCTACAGGAGTTGGGCCTACGCCGCGGCCGCCGCCTCCGGCGCCATTAGTCGGCGACGGGGGAAGATTG TGGCGGCGGATTGCGGTTAATGCCGTCGATCTGTTGAGGATGATGGTTTTTAGCGTGGTGTTCTGTTTGGAGTTCGCAATGAAAGTTCTATGGGTTAGAG ATCGGGAGACGGTGATCAGCGGGGGAGCTGGGGTGGAGCTTTGGCCGAGGAAGATGGCGACGGCGAAGTTCTTGCTCGGCGATATGAAGACGGTGAAGAC GGCAGTGCCTAAAGCGACAGTTAACGACGTCTTACTGAGCTTGATAACATCCGGACTGTCAAAATACTTAGACCATCGATCTCCAAACGAGAACAACCTG GAATACAGGCAAGTTCTTAGCAATCGAAACTCGGAGATTTCAAACATGATGAATAACAACTCAAGGGCAAGGTGGGGGAACAAGTTTGGTATGGTACTGT TACCAGTGAAATACTATCCTCAGACCAAAGGATTTGATCCGTTGGAGATTGTTAGGAGGACTACAAAGATGATCGGTAGGAAGAAGAACTCGTTCGAAGC TTATTTCTCGTACAATGTCGGCTACATGATTATGTATATGTTGGGACCCAAGGTCGCGACCATGTGTAACTACAATCTAATGTGCAACTCGACGTTTATG ATCTCGAACATGGTCGGACCGAAAGAGGAGATCACCATTGCTGGGAATCCGATCAACTTCATCAGAGTCAATACAACATGTCTTCCGTATGCTTTGACAA TGCACATGGTGAGCTATGCAGGAAGAGCTGAAATGCAGGTATTGGTGGCCAAAGACATCATTCCTGACCCTGAATTCCTGGCAAAGTGCTTTGAAGATTC GTTGCTCGAGATGAAGATTGCTGCCGAAAAGGCCGCATCTTGA
AA sequence Show only first row Show all	>Lus10027887 pacid=23156912 polypeptide=Lus10027887 locus=Lus10027887.g ID=Lus10027887.BGIv1.0 annot-version=v1.0 MKCNTSRDPLIDDDDHEFGDEPLSPAGRLFLRPEIDTVIHTVIGVTQFVELDAIKEIIRDSLMLEHPRFCSLFVRGRGGEERWRRTELDIDRHVITVDTK DRRRRIGDDDPERTVNDYAADLSVSSPLSLDKPLWEIHILPAEKCAVFRVHHALGDGISLMSLLLANCRKADDPEALPTGVGPTPRPPPPAPLVGDGGRL WRRIAVNAVDLLRMMVFSVVFCLEFAMKVLWVRDRETVISGGAGVELWPRKMATAKFLLGDMKTVKTAVPKATVNDVLLSLITSGLSKYLDHRSPNENNL EYRQVLSNRNSEISNMMNNNSRARWGNKFGMVLLPVKYYPQTKGFDPLEIVRRTTKMIGRKKNSFEAYFSYNVGYMIMYMLGPKVATMCNYNLMCNSTFM ISNMVGPKEEITIAGNPINFIRVNTTCLPYALTMHMVSYAGRAEMQVLVAKDIIPDPEFLAKCFEDSLLEMKIAAEKAAS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G53390			O-acyltransferase (WSD1-like) ...		Lus10027887 [exp]	0	1
					Lus10009493 [exp]	4.6	0.8698
					Lus10011659 [exp]	4.8	0.7623
					Lus10000363 [exp]	8.7	0.8150
					Lus10003285 [exp]	10.7	0.8150
					Lus10004996 [exp]	12.3	0.8150
AT3G27080		TOM20-3	translocase of outer membrane ...		Lus10041558 [exp]	13.8	0.8150
AT2G25737			Sulfite exporter TauE/SafE fam...		Lus10022134 [exp]	15.1	0.8150
AT5G12060			Plant self-incompatibility pro...		Lus10022829 [exp]	16.3	0.8150
AT1G20480			AMP-dependent synthetase and l...		Lus10011621 [exp]	17.4	0.8150
					Lus10000977 [exp]	18.5	0.8150

Compare expression of checked genes

Lus10027887 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.