Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G41705 267 / 2e-85 camphor resistance CrcB family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025622 [exp] 418 / 2e-144 AT2G41705 432 / 6e-149 camphor resistance CrcB family protein (.1.2) Lus10028072 [exp] 400 / 3e-137 AT2G41705 420 / 5e-144 camphor resistance CrcB family protein (.1.2) Lus10025621 [exp] 155 / 5e-46 AT2G41705 133 / 1e-37 camphor resistance CrcB family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G086800 [exp] 333 / 2e-111 AT2G41705 416 / 1e-142 camphor resistance CrcB family protein (.1.2) Potri.005G174600 [exp] 323 / 3e-107 AT2G41705 414 / 9e-142 camphor resistance CrcB family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF02537 [flax] [poplar] CRCB CrcB-like protein, Camphor Resistance (CrcB)
Representative CDS sequence Show only first row Show all	>Lus10028071 pacid=23181134 polypeptide=Lus10028071 locus=Lus10028071.g ID=Lus10028071.BGIv1.0 annot-version=v1.0 ATGACTGAAACAAGAAAAGGGTCCCTTGACATTGACTTGGAGAGTAATGAGGATGCTAAAACACATGCTTCCCCGTTGACGGAGGAAGACATTGCACCTT GTTCGACCGACTCAATGGTTGGATCCAAGGAGGTTCTGAATTGCAACGTGCAGGAGAAGGACAACTCGTATACCTTGCCGCCTTTGTTTGAAAAGATCTC ATGTTTCCTTCATCTAGCTGTTTTCGGAGATCTTGGGGTTTTGACAAGGCAATCGTTACAGCTTTTAACAAGACACTTGCTCCAAAAGCTTTTTGGCCCC GACTTTCCTCGCGAATACCTCGACCTTTCTTCTAATATTATCGGCTCTTTCCTGATGGGATGGTTGGGCGTCGTATTCAAAGCACGCATATCCACGGTGT CTGATCATCTTGCCACTGGATTAACGACCGGTTTCTTGGGAAGCCTCGCAACGTTCAGTGACTGGAATCAGAAAATGCTTGATCTGGCTGTTGATGGCAA ATGGCTTCGAGCTTTTTTTAACTTGCTCCTAGGCCTGATTCTTCCAGCATTCGCAATCAAATTTGGTGTATGGACTGCCAAACTCTACGAGCAGCGACTC GAAACGCAAAATTGCGGACACTACAGTAGCGGATGGAGAGTAAACAGTTTCAGGCGCCACTTAACCGTGATGATAGTTCTGGCATTGATGCTTAGCCTTC TATGGACTCTGAGTGGCATATTTCTGTGGAAAGAGTTCAACAGTAACGACATTAGAACCAAGGTTGCCGAGCTATTGATAGCTTTGATAGTTGGTCCGCC AGGGGTATGGATCAGGTGGTTCTTAGCACTCAGCCTAAACGGGCGCGGATTGGGGAGATCAGGCGTCCTGAACTGGTTACCGTTCGGTACACTAATCGCC AACATCTCCGCATCATGTATCATGGCAGCACTTGCAACCGTCAAGAACAAGATGGATACTAAGAACAGTGAGATAATTGCAACCGGGATTCAGTTCGGGT TCCTGGGTTGTTTGAGTGCTGTGTCGACATTCGTGGCAGAGTGGAATGCCATGGAAGGGGAGAGTACCAAAAGGTGGAGAGCCTACGTATACGTTTCTGG AACGATTCTGCTCTCATTTACTCTCGGAATCCTGATATACGCAATTCCTGTTTCGTCGAAATGA
AA sequence Show only first row Show all	>Lus10028071 pacid=23181134 polypeptide=Lus10028071 locus=Lus10028071.g ID=Lus10028071.BGIv1.0 annot-version=v1.0 MTETRKGSLDIDLESNEDAKTHASPLTEEDIAPCSTDSMVGSKEVLNCNVQEKDNSYTLPPLFEKISCFLHLAVFGDLGVLTRQSLQLLTRHLLQKLFGP DFPREYLDLSSNIIGSFLMGWLGVVFKARISTVSDHLATGLTTGFLGSLATFSDWNQKMLDLAVDGKWLRAFFNLLLGLILPAFAIKFGVWTAKLYEQRL ETQNCGHYSSGWRVNSFRRHLTVMIVLALMLSLLWTLSGIFLWKEFNSNDIRTKVAELLIALIVGPPGVWIRWFLALSLNGRGLGRSGVLNWLPFGTLIA NISASCIMAALATVKNKMDTKNSEIIATGIQFGFLGCLSAVSTFVAEWNAMEGESTKRWRAYVYVSGTILLSFTLGILIYAIPVSSK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G41705			camphor resistance CrcB family...		Lus10028071 [exp]	0	1
AT5G60910	MADS	FUL, AGL8	FRUITFULL, AGAMOUS-like 8 (.1....		Lus10007983 [exp]	2.8	0.7895
AT2G33810	SBP	SPL3	squamosa promoter binding prot...		Lus10013999 [exp]	6.0	0.7529
AT2G23770			protein kinase family protein ...		Lus10041323 [exp]	10.5	0.7013
AT1G19670		CORI1, ATHCOR1,...	CORONATINE-INDUCED PROTEIN 1, ...		Lus10004076 [exp]	10.9	0.7905
AT4G39210		APL3	Glucose-1-phosphate adenylyltr...		Lus10040437 [exp]	15.5	0.7476
AT3G26510			Octicosapeptide/Phox/Bem1p fam...		Lus10036862 [exp]	19.2	0.7870
AT2G36200			P-loop containing nucleoside t...		Lus10022694 [exp]	20.1	0.7407
AT2G23700			Protein of unknown function, D...		Lus10040507 [exp]	21.8	0.7617
AT4G39210		APL3	Glucose-1-phosphate adenylyltr...		Lus10023553 [exp]	24.7	0.7658
AT2G28550	AP2_ERF	TOE1, RAP2.7	TARGET OF EARLY ACTIVATION TAG...		Lus10015055 [exp]	27.4	0.7611

Compare expression of checked genes

Lus10028071 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.