Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G41705 404 / 1e-137 camphor resistance CrcB family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025622 [exp] 740 / 0 AT2G41705 432 / 6e-149 camphor resistance CrcB family protein (.1.2) Lus10028071 [exp] 431 / 3e-149 AT2G41705 298 / 1e-97 camphor resistance CrcB family protein (.1.2) Lus10025621 [exp] 170 / 6e-51 AT2G41705 133 / 1e-37 camphor resistance CrcB family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G174600 [exp] 500 / 2e-175 AT2G41705 414 / 9e-142 camphor resistance CrcB family protein (.1.2) Potri.002G086800 [exp] 489 / 2e-171 AT2G41705 416 / 1e-142 camphor resistance CrcB family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0184 [flax] [poplar] DMT PF02537 [flax] [poplar] CRCB CrcB-like protein, Camphor Resistance (CrcB)
Representative CDS sequence Show only first row Show all	>Lus10028072 pacid=23181185 polypeptide=Lus10028072 locus=Lus10028072.g ID=Lus10028072.BGIv1.0 annot-version=v1.0 ATGGCTGAAACAGGAAAAGGGTCGGTTGAAGAAAGGAGTGAATCGTTTGGTAAGACAAGTAGTGTGGGTTCTTCTCTACGAAGACGTTCTTGTAGCCTGT CTCGTACACTGTCTTTCCAAACAGAACATGGCGTCGAGAGCGATAATGTATCGGAAGCAGGTGATATTGGGGATAGGGCTCTTCATAGCAGCAGCAGGCA TAGCGAGAGCGGTAGTGTTAGGCGGCTGTCCCTTGACATTGCATTGGAGAGTGGTGTTGCCTATCCAATTCCCGAGGGTGATTTCTTGCGATGGCAGATG TCTCATTCCAAAGATCACTGGGGTGTAGATGCAAAAACACATGCTTCCCAGTTGACAGAGGAAGACATTGCACATCGTTCAACCGAGCCAATGATTGGCT CCAAGGAGGAAAAGGACAACTCATCGAGATTGCCGCTGTTGTTTGAGTACGTCTCATGTTTGCTTCATCTGGCTGTTTTCGGGATTCTTGGGGTTTTAAC AAGGTACTTGCTGCAAAAGCTTTTTGGCCCTAGCGTTGCTCGAGTGACAAGTGATGCCAGCCCTCTATACCTTGACCTCCCTTCTAATATGGTCGGCTCT TTCCTGATGGGATGGTTAGGTGTTGTCTTCAAACCTCGCATATCCATGGTGTCTGATCATCTTGCCATCGGGTTGTCGACAGGTTACTTGGGAAGCCTCA CAACTTTCAGTGGTTGGAATCAGAAAATGCTTGATCTGGCTGTTGATAGGAAATGGGTCTATGCTATTTCCGGCTATCTCCTAGGTCTGTTCCTTGCAGC ATACTCCATCAAGTTCGGTGTAGGAACTGCCAAATGCTTCAAACTACTACTTGAAACGCTAAATTGTGGACACAGTAGCAAGTGGTCATTGAAAAGTTTC AGGCGCCGCTTAGCAGTGATGACCGTACTGGTATTAATGCTTGGCCTTCTGTGGACTCTTAGCGGCACATTACTGAGGAAAGAGTTTAACGACAGTAGCA CCGAGGCGCAACTATGGATAGCCTGCATAGCTGCTGCACCAGGGGTGTGGATCAGGTGGTTCTTAGCACGCCTTAACGGGCGTGGATTGGGGAAATCTGG TGTCCTGAAATGGATACCGTTCGGTACACTAGTTGCCAACATTTCCGCAGCATGTATCATGGCAGCACTTGCAACTGTCAAGAACAAGGTGGATACTAAG GACTGTGACACGATTGCAACCGGTATACAGTTCGGGTTCCTGGGCTGTTTAAGTACCGTGTCGACATTCATGGCAGAGTATAATGCCATGGAAGAGAGTG TGAAACCGTGGAGAGCCTATGTATACGGTTTGGTAACTAATCTGGCGTCGTTTACCCTGGGAATCTTGATATACGCAGTTCCTGTTTGGTCTAAATGA
AA sequence Show only first row Show all	>Lus10028072 pacid=23181185 polypeptide=Lus10028072 locus=Lus10028072.g ID=Lus10028072.BGIv1.0 annot-version=v1.0 MAETGKGSVEERSESFGKTSSVGSSLRRRSCSLSRTLSFQTEHGVESDNVSEAGDIGDRALHSSSRHSESGSVRRLSLDIALESGVAYPIPEGDFLRWQM SHSKDHWGVDAKTHASQLTEEDIAHRSTEPMIGSKEEKDNSSRLPLLFEYVSCLLHLAVFGILGVLTRYLLQKLFGPSVARVTSDASPLYLDLPSNMVGS FLMGWLGVVFKPRISMVSDHLAIGLSTGYLGSLTTFSGWNQKMLDLAVDRKWVYAISGYLLGLFLAAYSIKFGVGTAKCFKLLLETLNCGHSSKWSLKSF RRRLAVMTVLVLMLGLLWTLSGTLLRKEFNDSSTEAQLWIACIAAAPGVWIRWFLARLNGRGLGKSGVLKWIPFGTLVANISAACIMAALATVKNKVDTK DCDTIATGIQFGFLGCLSTVSTFMAEYNAMEESVKPWRAYVYGLVTNLASFTLGILIYAVPVWSK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G41705			camphor resistance CrcB family...		Lus10028072 [exp]	0	1
AT2G36310		NSH1, URH1	nucleoside hydrolase 1, uridin...		Lus10035601 [exp]	1.0	0.9036
AT5G65980			Auxin efflux carrier family pr...		Lus10001303 [exp]	2.0	0.8864
AT1G34770			unknown protein		Lus10033452 [exp]	7.9	0.8163
AT1G20050		HYD1	HYDRA1, C-8,7 sterol isomerase...		Lus10032965 [exp]	8.9	0.8326
AT5G19730			Pectin lyase-like superfamily ...		Lus10041815 [exp]	9.5	0.8657
AT2G37240			Thioredoxin superfamily protei...		Lus10029111 [exp]	11.5	0.8614
AT1G06750			P-loop containing nucleoside t...		Lus10021225 [exp]	13.2	0.7697
AT4G30900			DNAse I-like superfamily prote...		Lus10036263 [exp]	13.4	0.7787
AT5G51780	bHLH	bHLH036	basic helix-loop-helix (bHLH) ...		Lus10031677 [exp]	14.0	0.8471
AT2G38760		ANN3, ANNAT3	annexin 3 (.1)		Lus10039550 [exp]	14.1	0.8470

Compare expression of checked genes

Lus10028072 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.