Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G34540 123 / 2e-33 unknown protein AT2G34530 60 / 2e-10 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042827 [exp] 523 / 0 AT2G34540 129 / 3e-35 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G064900 [exp] 169 / 1e-50 AT2G34540 110 / 3e-28 unknown protein Potri.004G064800 [exp] 63 / 2e-11 AT2G34530 175 / 1e-53 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10028123 pacid=23166533 polypeptide=Lus10028123 locus=Lus10028123.g ID=Lus10028123.BGIv1.0 annot-version=v1.0 ATGGAACGTATGATGCTTGGTCTCAGAAGCAGCAAAGCACCTCTAGCCACGAACAACCTCCGATGCATTCTCAACCTCAACAATACGAGGAGCCTTATTA GGCATCATTCTTCATCATTTCCATCAATCGCCAGATCGCACAAGCTGGCAGCTTACGCATTTAAGAAAAGGGCGGGTTGCATAATATGCGCAGAAGCAAA CAAGCAGGGGAAATTCAAGACTACCTTGGTTTTCGGCTGTGCTATCGGCCTTAGCATCATCCTTATGACGAGAAGGAATGGCGACATAGCAATAGCTGGA CCAAGGCAACTGTATCAAAAGGCTCCACAATCTCCAGCAGTTGCAGGGTATCCACTGGGAGGCAAGGCAGCAATAAAGTCGTTGTTGGACGTGCCAAAAC CGATGGCTTCCACCAGAGCTGAACCCTTTCAGAGGAAGTTTGAGTTGCCCTATAGTCCCTCCATGGCTGAAGTCAACGCTATCAAGATGCATGCGGTGAA GCTCATGGCACAGGGACAAGCTGAATCGGCGGTGACATTTCTGCGGGAGGCCTATTACGTGTATAAGAAGAGAAATGATAACGAACCTGCTTACAACGTT GGGATGGTTTTAGTGGAGATTCTCATGTGTCAGGGAAAATACGTCGAAGCGTTGGAATGCAACTGTTTAAATGATAATCAGCGCCTGCCATCAGATGGTC GGTTTCCTCTTTATAAGGCAATTATCTGCACGATGTTGGATTACAGAGTGGAGGCCAGGAGGTGGTGGGAACAGTACATTGAAGCTGTTGAGCAAGTGAT TGAACCGCCTTAA
AA sequence Show only first row Show all	>Lus10028123 pacid=23166533 polypeptide=Lus10028123 locus=Lus10028123.g ID=Lus10028123.BGIv1.0 annot-version=v1.0 MERMMLGLRSSKAPLATNNLRCILNLNNTRSLIRHHSSSFPSIARSHKLAAYAFKKRAGCIICAEANKQGKFKTTLVFGCAIGLSIILMTRRNGDIAIAG PRQLYQKAPQSPAVAGYPLGGKAAIKSLLDVPKPMASTRAEPFQRKFELPYSPSMAEVNAIKMHAVKLMAQGQAESAVTFLREAYYVYKKRNDNEPAYNV GMVLVEILMCQGKYVEALECNCLNDNQRLPSDGRFPLYKAIICTMLDYRVEARRWWEQYIEAVEQVIEPP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G34540			unknown protein		Lus10028123 [exp]	0	1
AT3G44716			unknown protein		Lus10020554 [exp]	3.0	0.8956
AT2G41200			unknown protein		Lus10032687 [exp]	3.5	0.8953
AT2G37390		NAKR2	SODIUM POTASSIUM ROOT DEFECTIV...		Lus10024435 [exp]	3.9	0.8937
AT2G14520			CBS domain-containing protein ...		Lus10012476 [exp]	5.3	0.8577
AT1G17050		SPS2	solanesyl diphosphate synthase...		Lus10042491 [exp]	6.9	0.8931
AT5G24620			Pathogenesis-related thaumatin...		Lus10032914 [exp]	8.4	0.9029
AT5G54160		ATOMT1	O-methyltransferase 1 (.1)		Lus10039864 [exp]	10.6	0.8996
AT5G55480		GPDL1, GDPDL4, ...	glycerophosphodiesterase-like ...		Lus10018042 [exp]	16.7	0.8805
AT4G37080			Protein of unknown function, D...		Lus10032768 [exp]	18.7	0.8380
AT4G17540			unknown protein		Lus10004359 [exp]	18.9	0.8426

Compare expression of checked genes

Lus10028123 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.