Lus10028176 [FLAX]

| External link |
|
||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | |||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| ||||||||||||||||||||||||||||||
|
Paralogs
|
|
||||||||||||||||||||||||||||||
|
Poplar homologues |
|
||||||||||||||||||||||||||||||
| PFAM info |
| ||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10028176 pacid=23166532 polypeptide=Lus10028176 locus=Lus10028176.g ID=Lus10028176.BGIv1.0 annot-version=v1.0
ATGACTCGTCGGCAGCTGCTTCTACTCAACAATCTTAGCCATCTAAGGAGGCGTTACAAGTCCCCGTGGCCACTTCTTGCGGCGGTCAATTTCACTATTG
GAGCTATTTGTTCACAAGATGAAGATGAAGAAAGAGAAGTGGATGTTGGAAGAGAAGAGTACGAAGTGGATTCCTATATGACAATCTACCTAAAATTTAA
CTGTAACATCCTGCCCGCCTGCCCAAGTCCAAGAAGCAGCAAAATCCCCAAAGAAGAGAGAGCACACTTGTCAAAATCTTCGAAACTCATCGTAGCTCGA
TTTCTTCTGCATTTTGCCTTACAGCAGCCAGGAACCCTAAACAGCCTTCGCCTGCCTTTTCCCGGTTCGTCCTCGATGTCTAAGTTCTCTATGATGGTTC
CGAACCAGATTCGGTTCTTGCTTCAGAGCTTGAACGGAGCCAACGCCGACTCTGTTTTCCGGGAGCTTTGTCAGTTCAGTGATTATGGTGTTGAAGGGAG
CATCCTGCTGCTTCAGATCTGCTTTGAACACCTTAATATCTACCCAACAGATCTGCAGAACGTCCATCTTGAACAAGTTCTCGAGTCCATTTTCAAGTTT
CTGATGAGTAAACCAAATTTCTCAACAGTGTTCTGCCAGTCTCTGGGTAGTGTGGTAATAAGTGAGCAAGTGTTGGAGACTTTGTCTAGTAGTTTGCACT
TAACGGTACAGGAAAAGATTGGACTGGGCCTCGCTTTGTCTGATTCTGATGATCTCGACACTAGGATGTATGCAAAAAATTTCTGCATGTCTCTGCTTGA
GGAATTGTGCGCCAATCCTGTTTCTATAACCTCTACTGAGCAGATTCAGAATATTGTTATGTTCCTCCAGCGATCGGAGGACTTCTCCAAGCATGTCGAT
CAATTTATGCAGATGTTATCACTGACTCGATCAAACGATGTTATACCATTTGTGTTAACTCCACTGCTTTCAGAAGAATTACGGGAGAAAAACTTTTTAA
GAACCATCGATCGTTTGTATGAAAGCGAAGAAAGTGAATTTGATGCAATTTTAGCTGACATGGAGAAGGAGATGAGTGTGGGAGATGTTATGGAGGAATT
AGGATATGGATGCACATTGGATGCCTCACATTGCACAGAGATATTAGCTCTTCTCCAGCCACTTACTGAGATTACCATCTCTAGGATTCTTGGTGCAATT
GTACGCAGCCAGACTGGTCTGGAGGATAACCAGAGTACATTTTCGACCTTCAGTACTGCTCTTGGTTACGGTTTTTCCAATGATCTACGAACTGTTAGCT
CTTGGGATGTTGAGGTCCTTGTAAGAACAGTCATGCAACTTGCACCAGATACCAACTGGATTAAAGTCATTGAGGGCTTGGATCATGAGGGATTTTATGT
TCCTAATGAGGAGGCTTTTTCTTTTCTTATCTCCATCTATCGCTGTGCATGCCAGGATCCATTCCCTCTTCATGCTATCTGCAGGGTTCCTTGGAAGAAC
ACTGAGGGACAGCTATCGATTCTTAGATATGCAGTGTTGGCACCCCCTGAAGTGTTAACCTTTGCTCACTCTGGGAGACAGCTGGCGTACATGGATGCAG
ATAATGGACACAAGCTTCAAGCTGGATGTGCAAATCAAGCATGGTTGTGTATTGACCTCCTGGACGTTCTTTGTCAGTTAGCTGAGAGGGGTCATGCTAA
CTATGTGCGAGCTATGCTGGAATATCCACTTAAACATTGCCCAGAGATCTTACTACTAGGGATGTCACATGTAATTACTGCTTATAACCTGCTGCAATAT
GAGGTGGTGTTTAAGGTTTTCCATATACTCATCAAAAGCTCCAATGTTGCTGACATGATCATGTACATCTGGCATGTAAACCCTGGCCTTGTTGTTAGAG
GGTTTGTGGACGTTCAAAATATTGATCCAGATATCATGGCTAAAATTGTAGACCTTTGCCAGGAACTGAAGATTCTGTCTTCAGTGTTGGAGTTGATTCC
TTTCCGTGTTGGCATAAGATTAGCTGCCCTTGCATCACGGAAAGAGTTGTTGGACCTGGAGAACTGGTTGACTAATAATATAGTAACATTTAAGGATTCA
TTTTTTGAGGAGTGCCTCAAGTTTCTGAAGGAATCTCAGCTTGGTGGATCACAAGATTTTTCGGGGAAACCTTTTCGCCATGGGAATACTGCTGTGAATT
TGAACATTAATACCAGTTCCACAATGTTGAAGGCTCTTAAGGCTCACAGCCCCCTGATTGTAGATATCAAACTTTCTGAGGAAATGGAGAGGTTGTTAAC
GACAACTTTGGATTCAAATCCTAGGCTTCAGAATGGTGCCTCTGCTGATTCATCTTCCCCTGATGGCTATTCGGATGACGTCGAGGCGGAGGCAAACTTA
TATTTCCATCATATGTTCTCTGGGCAGTTGACAATAGATGGAATGGTTCAAATGCTTGCTCGATTCAAGGAATCTTCTCTATCTAGGGAACGCTCTATTT
TCGACTGTATGATTAGCAATCTATTTGAGGAATACAAGTTCTTTCCCAAGTATCCAGAACGACAGCTTAAAATTGCAGCCGTACTCTTTGGTTCGGTTAT
CAAGCACCAACTGGTAACACATGTAACTCTTGGAATTGCATTACGTGGTGTTCTAGATGCACTACGCAAGCCTCCAGATTCAAAAATGTTTGTGTTCGGT
ACCAAGGCGCTGGAACAGTTCGTGGATCGTCTGACTGAATGGCCACAGTATTGCAATCATATCTTGCAAATATCTCATCTTCGCGGCGCTCATTCTGAGC
TCTTTGCTTTCATTGAACGGGCACTAGCCAGAATTTCATCAGGGCATCTTGAGACAGAAGATGCCAATGCCTCTGCAAGTCACCAACATGCTCTTCCGCA
CGCTGTATCAGGGAACGTTGAGTTCAATGCTATTAACTTAACGCCTCCTGTGCAGCAACCATCATCTCTGCCCAACATCCAACAGAGAGTTGAAGTTCCC
CTTGATGACCGCCATAAGCTATCTGTAGCTTTATCTAGTGACTTTAAACCACCTTTATCAAGTGGACAATCTACTGTTGGTTCCGTACCTGATCTGTCTA
CCCTTCAGAGAAGCGTTTCTACCACCCAGGCTATGCCGTCCTCTTCACCTGGTTTCTTGCGACCTACTCGCAGTGTTACCTCTACCAGGTTTGGCTCGGC
ACTGAACATTGAAACACTTGTAGCAGCTGCAGAGAGAAGAGACACACAAATTGAGGCTCCTGCTTCTGAAATTCAAGACAAAATATCGTTCATCATTAAC
AATATCTCTACTGCCAATATTGAAGCAAAATCTAGAGAATTCAGTGAAATACTGACTGAACATTTTTATCCCTGGTTTGCTCAGTATATGGTCATGAAAA
GAGCGAGCATTGAGCCAAATTTCCATGACTTGTACTTGAAGTTTCTAGACAGAATTAATTTAAAGGCTCTGAATAAGGAGATTGTTCAAGCCACATATGA
AAATTGCAAGGTTCTGTTAGGATCAGAGCTTATAAAATCGAGTTCAGAAGAGCGTTCGCTGCTAAAGAATTTGGGGAGCTGGCTTGGTAAATTAACAATT
GGCCGAAACCAGGTTTTAAGGGCCCGTGAGATAGATCCCAAATCTTTGATCATAGAGGCATATGAGAAAGGGTTAATGATTGCTGTTATTCCATTCACAT
CAAAGGTTCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCACCCAATCCTTGGACAATGGGAATCCTGAGCTTGCTTGCTGAGATTTACTCAATGCC
CAATTTGAAAATGAACTTGAAATTTGACATGGAGCTACCAGTTGAGCCTCTTAATTCTGGGGGTCGTACACCCGTGCCCTCTCAGGTTTCTTCTGGCACA
AAGATGGAGGATGAAAAACTACCTGGTTTGAGTTTGTCTGACCAGCTTCCTTCTGGACAATCACTATTCCAGCCTACTCCTACACAATCTCCTTTTCCTG
CTAGTCAGTTCCCTACAGTGTCAATGGCCAATATAGCTCCCCATGTTGTCATTAACCAGAAGCTTCAGGGTTGGGGTCTGAATTTTCAAAGGATGGTCCC
TATTGTAATTGAAAGAGCTGTCAAGGAAATCGTACCAGGTATTGTTCAGCGCAGTGTTTCTATAGCTACCCAGACAACAAAGGAGCTTGTTTTAAAGGAT
TATGCCATGGAAACTGACGAGACTCGCATATGCAATGCGGCACACCTAATGGTTGCTAGCTTGGCTGGAAGCTTAGCTCACGTCACCTGCAAGGTTTTGG
CTTTACTTAGCCGTGCTATATTACCATTAAGTGCCGGGTTGTGTTACTCTGTTGATATTATAAATGCTGAACCTCTACGTAGTTCAATATCAAGCCTTAT
GAGGAGTTCCCTTCAAACCACACCCTATGGTTTGAATACCACAAGTGAGCTTCTTGAACATGCTGTGCAGCTTGCCACCAATGATAACCTTGATTTGGGG
TGTGCACTGATTGAACAAGCTGCAACAGACAAGGCGATGCTAAGTATTAGCGATGAAATAGCCCACCAATTATCATTGAGAAGGAAACATAGAGACAGTG
TTGGCCAAACATTATTTGAGACAAACATGTATGACCAGTGTTCCATGGGTGTGGTACCTGAGGCTCTCCGCCCTAAGCCTGGGCACTTGTCCTTGTCTCA
GCAGCGAGTTTACGAGGACTTTGTTCGGCTTCCGTGGCAAAGTCAGTCTACCCAGGGCTCCCAGTCTATTGCTACTGGCAGTGGTCTTGCTGGTGGACAT
GGCATGGTGTCTGGACAGGCCATCTCAGGGTATTCTTCTGGTGTAGTGGGTTTGGGATTCGAGGCAACTCAAACGTTGGATCTGGGTTCTGAGGCAATTG
ATTCAAATTCAGCAGCACTTCCAAGTACTTCCTCGATAAATATTGGAGCAGATGCTACTGTACCAGCTACTGAATCTCAGCTGGTAGATCCTTCCGACAA
TGTGAACGTTGGACAAATACCAGTTTCTGAATCTGGATCTTCCTCTCAACAAATGCCATCATCTATTGCTTCTGAACGAGTTGGGACTACTGTATCTGAA
CCTTCACTAAGCACAAGGGACGCACTGGATAAGTACCAAGTCATTGCTCAAAAGATGGAAGCTTTGGTCACAAGTGATGGTAGAGAAGCAGAGTTACAGG
GAGTGATTACCGAGGTACCTGAGATAATACTTCGCTGTATCAGTCGTGATGAGGCTGCCCTAGCTGTTGCTCAAAAGGTTTTCAAGGGCTTATATGAGAA
TGCTTTTAACATTTCTCATGTTAGTGCCTCTCTTGCAATTTTGGCTGCAATACGAGATGTCTGCAAGCTTGTAGTTAAAGAACTTACTAGCTGGGTCATT
TACTCAGACGAGGAGCGAAAATTCAATAAAGATATCACTATGGCTCTTATACGCAGTGAATTACTCAATCTTGCAGAGTACAATGTTCATATGGCAAAAC
TTATCGATGGTGGAAGGAATAAAGCTGCAACCGAGTTTTCTGTTTCACTTATCCAAGCTTTGGTTGTTGAAGATTACAATATCATCTCTGAACTTCATAA
TCTTGTTGATGCATTGACAAAGCTTGCTTCAAAACCTGGATCTCCCGAGTCACTGCAACAACTGATGGAGATTGTGAAGAACCCTACTGCTAATGTTGCT
GCTATATCAGCTTTTGCTGTTGGAAAAGATGATATAACAAGACAGAAAAAGGTTACCAATCCTTCCTCGGTCAACCGTGAAGACTTCAGTACCGTGGAGT
CCGTAGAAACCGACCCTGCAGGATTCAGAGATCAGGTTACTGTTCAATTCCGTGAATGGTACCGGATATGTGAACTACCTGCCTCAAATGATTCTACATA
TAGCCATTACCTCTTGCAACTGCGCCAGAATGGGTTTCTCAAGGGTGATGACTTGACTGACCGATTTTTCCGCGTTCTGATGGAACTTTCTGTTGACCAC
TGTCTCTCTTCTGAGGGGTTGAATTCAGCTGGAATGCAAGGGCAGAGTATGTCGTTTCTTGCCATTGATATATTTGCAAAACTCCTCTTTGCGATTCTAA
AGGTTGAGCAGGGACCTACTAAACAGTTCCTTCTGTCAAAGATGCTGGCTGTTACTGTAAAATATATACAAAAAGACTCCGAGGACAAGAAACTTGCTTT
TAATCAAAGGCCGTATTTCAGATTGTTTATAAACTTGATGCTTGACCTTGTTTCATTGGAATCTGGAAATGAGGGGGGGATTTTTCAGATTCTGACTTCA
TTTGCTCAGGCGTTCCATCTTTTGCAACCTCTTAAAGTTCCTGCGTTCAGCTATGCGTGGCTCGAGTTAGTAAGTCACAGAAGCTTCATGCCGAAATTAC
TTACTGGAAATGTGCAAAAGGGCTGGCCATATGTTCAACGACTGCTAGTAGATCTGTTTCAGTTCCTTGAGCCCTTTCTAAGAAATTCTGATCTGCGAGG
ACCAGTCTCCTTCCTTTACAAAGGTACCCTCAGAGTGTTGCTGGTGCTACTGCATGATTTCCCCGAGTTTTTATGTGACTATCATTTCACCTTCTGTGAC
GTCATACCACCAAGTTGCATACAAATGCGCAATATTATTTTGAGTGCATTTCCGCGCAACATGAGGCTTCCCGATCCATCCACCCCAAATTTAAAGATTG
ATCTGCTTCCTGAAATTAGAGAACCACCTCACATTTTGTCAGAGGTTGATGCAGCTCTGAGATTGAGAAACATGAAAGCTGACGTGGATGAATATCTGAA
GACGAGGCAACAAGGTTCTTCATTTCTCACTGACCTGAAACAGAGGCTGATTCTTATGCCCAGTGAGGCTTCAACGGCCGGGACACGTTACAATGTATCA
CTGATTAATTCTCTCGTCCTTTACACTGGGATGCAGGCAATCCAACAGCTGCAGGCAAGAACGCCTCAAGCTTTGTTGGTGGACGCTGAATTAGATATTT
ACCAGACCCTAGTAGTTGAGCTAGACAATGAAGGTCGATACCTCGTCCTCAATGCCGTTGCTAACCAACTGCGCTATCCGAATAACCACACACATTACTT
CTCTTTTGTCCTGCTCTACTTATTTGCCGAGTCAAACCAGGAAATAATCCAGGAGCAGATTACCAGAGTGCTGTTGGAACGTCTGATTGTTAATAGACCG
CACCCATGGGGCCTTTTGATCACTTTCATTGAGCTAATCAAGAATCCGAGGTACAATTTCTGGAACCGGTCATTCATAAGATGTGCTCCGGAGATAGAGA
AGCTGTTTGAGTCGGTGGCGAGATCTTGTGGAGGCTTGAAGCCGATGGATGAGAGTATGGTCTCTGGTTGGGTTTCCGAGGCCGGACATTGA
|
||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10028176 pacid=23166532 polypeptide=Lus10028176 locus=Lus10028176.g ID=Lus10028176.BGIv1.0 annot-version=v1.0
MTRRQLLLLNNLSHLRRRYKSPWPLLAAVNFTIGAICSQDEDEEREVDVGREEYEVDSYMTIYLKFNCNILPACPSPRSSKIPKEERAHLSKSSKLIVAR
FLLHFALQQPGTLNSLRLPFPGSSSMSKFSMMVPNQIRFLLQSLNGANADSVFRELCQFSDYGVEGSILLLQICFEHLNIYPTDLQNVHLEQVLESIFKF
LMSKPNFSTVFCQSLGSVVISEQVLETLSSSLHLTVQEKIGLGLALSDSDDLDTRMYAKNFCMSLLEELCANPVSITSTEQIQNIVMFLQRSEDFSKHVD
QFMQMLSLTRSNDVIPFVLTPLLSEELREKNFLRTIDRLYESEESEFDAILADMEKEMSVGDVMEELGYGCTLDASHCTEILALLQPLTEITISRILGAI
VRSQTGLEDNQSTFSTFSTALGYGFSNDLRTVSSWDVEVLVRTVMQLAPDTNWIKVIEGLDHEGFYVPNEEAFSFLISIYRCACQDPFPLHAICRVPWKN
TEGQLSILRYAVLAPPEVLTFAHSGRQLAYMDADNGHKLQAGCANQAWLCIDLLDVLCQLAERGHANYVRAMLEYPLKHCPEILLLGMSHVITAYNLLQY
EVVFKVFHILIKSSNVADMIMYIWHVNPGLVVRGFVDVQNIDPDIMAKIVDLCQELKILSSVLELIPFRVGIRLAALASRKELLDLENWLTNNIVTFKDS
FFEECLKFLKESQLGGSQDFSGKPFRHGNTAVNLNINTSSTMLKALKAHSPLIVDIKLSEEMERLLTTTLDSNPRLQNGASADSSSPDGYSDDVEAEANL
YFHHMFSGQLTIDGMVQMLARFKESSLSRERSIFDCMISNLFEEYKFFPKYPERQLKIAAVLFGSVIKHQLVTHVTLGIALRGVLDALRKPPDSKMFVFG
TKALEQFVDRLTEWPQYCNHILQISHLRGAHSELFAFIERALARISSGHLETEDANASASHQHALPHAVSGNVEFNAINLTPPVQQPSSLPNIQQRVEVP
LDDRHKLSVALSSDFKPPLSSGQSTVGSVPDLSTLQRSVSTTQAMPSSSPGFLRPTRSVTSTRFGSALNIETLVAAAERRDTQIEAPASEIQDKISFIIN
NISTANIEAKSREFSEILTEHFYPWFAQYMVMKRASIEPNFHDLYLKFLDRINLKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTI
GRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILSLLAEIYSMPNLKMNLKFDMELPVEPLNSGGRTPVPSQVSSGT
KMEDEKLPGLSLSDQLPSGQSLFQPTPTQSPFPASQFPTVSMANIAPHVVINQKLQGWGLNFQRMVPIVIERAVKEIVPGIVQRSVSIATQTTKELVLKD
YAMETDETRICNAAHLMVASLAGSLAHVTCKVLALLSRAILPLSAGLCYSVDIINAEPLRSSISSLMRSSLQTTPYGLNTTSELLEHAVQLATNDNLDLG
CALIEQAATDKAMLSISDEIAHQLSLRRKHRDSVGQTLFETNMYDQCSMGVVPEALRPKPGHLSLSQQRVYEDFVRLPWQSQSTQGSQSIATGSGLAGGH
GMVSGQAISGYSSGVVGLGFEATQTLDLGSEAIDSNSAALPSTSSINIGADATVPATESQLVDPSDNVNVGQIPVSESGSSSQQMPSSIASERVGTTVSE
PSLSTRDALDKYQVIAQKMEALVTSDGREAELQGVITEVPEIILRCISRDEAALAVAQKVFKGLYENAFNISHVSASLAILAAIRDVCKLVVKELTSWVI
YSDEERKFNKDITMALIRSELLNLAEYNVHMAKLIDGGRNKAATEFSVSLIQALVVEDYNIISELHNLVDALTKLASKPGSPESLQQLMEIVKNPTANVA
AISAFAVGKDDITRQKKVTNPSSVNREDFSTVESVETDPAGFRDQVTVQFREWYRICELPASNDSTYSHYLLQLRQNGFLKGDDLTDRFFRVLMELSVDH
CLSSEGLNSAGMQGQSMSFLAIDIFAKLLFAILKVEQGPTKQFLLSKMLAVTVKYIQKDSEDKKLAFNQRPYFRLFINLMLDLVSLESGNEGGIFQILTS
FAQAFHLLQPLKVPAFSYAWLELVSHRSFMPKLLTGNVQKGWPYVQRLLVDLFQFLEPFLRNSDLRGPVSFLYKGTLRVLLVLLHDFPEFLCDYHFTFCD
VIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIREPPHILSEVDAALRLRNMKADVDEYLKTRQQGSSFLTDLKQRLILMPSEASTAGTRYNVS
LINSLVLYTGMQAIQQLQARTPQALLVDAELDIYQTLVVELDNEGRYLVLNAVANQLRYPNNHTHYFSFVLLYLFAESNQEIIQEQITRVLLERLIVNRP
HPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVARSCGGLKPMDESMVSGWVSEAGH
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10028176 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.