Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G45670 191 / 2e-59 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) AT4G18970 189 / 5e-59 GDSL-like Lipase/Acylhydrolase superfamily protein (.1.2) AT1G29660 185 / 2e-57 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) AT1G29670 185 / 2e-57 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) AT1G33811 142 / 8e-41 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) AT2G19010 124 / 4e-34 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) AT2G19050 117 / 3e-31 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) AT1G71691 107 / 2e-27 GDSL-like Lipase/Acylhydrolase superfamily protein (.1.2) AT2G19060 104 / 1e-26 SGNH hydrolase-type esterase superfamily protein (.1) AT4G30140 103 / 3e-26 CDEF1 CUTICLE DESTRUCTING FACTOR 1, GDSL-like Lipase/Acylhydrolase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041847 [exp] 290 / 2e-98 AT1G29670 459 / 2e-162 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10011997 [exp] 210 / 9e-67 AT5G45670 555 / 0.0 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10002777 [exp] 199 / 9e-63 AT5G45670 548 / 0.0 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10002775 [exp] 199 / 1e-62 AT1G29670 497 / 1e-177 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10011998 [exp] 198 / 2e-62 AT1G29670 493 / 4e-176 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10005413 [exp] 185 / 1e-57 AT1G29670 399 / 3e-139 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10011996 [exp] 169 / 8e-51 AT1G29670 451 / 3e-159 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10015842 [exp] 148 / 4e-43 AT5G45670 325 / 7e-110 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Lus10002779 [exp] 130 / 3e-37 AT1G29660 235 / 2e-76 GDSL-like Lipase/Acylhydrolase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G076500 [exp] 186 / 1e-57 AT5G45670 533 / 0.0 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.004G064500 [exp] 184 / 4e-57 AT1G29670 527 / 0.0 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.011G076400 [exp] 161 / 4e-48 AT5G45670 375 / 3e-129 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.019G008000 [exp] 158 / 6e-47 AT1G29670 347 / 1e-118 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.019G008904 [exp] 155 / 1e-46 AT4G18970 246 / 3e-80 GDSL-like Lipase/Acylhydrolase superfamily protein (.1.2) Potri.012G060700 [exp] 154 / 7e-46 AT1G29660 306 / 5e-103 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.019G008902 [exp] 155 / 1e-45 AT1G29670 342 / 2e-116 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.019G005400 [exp] 155 / 1e-45 AT1G29670 336 / 3e-114 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.019G005402 [exp] 155 / 1e-45 AT1G29670 341 / 3e-116 GDSL-like Lipase/Acylhydrolase superfamily protein (.1) Potri.019G008906 [exp] 155 / 1e-45 AT1G29670 345 / 1e-117 GDSL-like Lipase/Acylhydrolase superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10028394 pacid=23166104 polypeptide=Lus10028394 locus=Lus10028394.g ID=Lus10028394.BGIv1.0 annot-version=v1.0 ATGGCAGCCAACAGTTTTAAAATTGGACAACTGAACACATTATGTTGGTGGACTCTGTTTCTCCACAATGTTCTTGCCACTATTGCAGTGGCACCTTACC GAGTAGACTTCCCCAACGGTCCTGCTGGGAGGTTCTCTAACGGCAAAACAACTGTTGATGTCATTGCTGATCTATTGGGTTTTGATAACTACGTCCCTTC CTACGGGGATGCCAACGCGTCCGCTGCAGCTGGGATTCGAGACGAGACTGGGAAGAATCTGGGAGGGAGGATCAGATTCAGTGGCCAAGTGAAGAACTAT ATCGATACGGTGTCGGAGATTGTGAGATTGGAAGGAGATGAAGATAGTGCGGCTAGGTACTTGAGGAAGTGCATTTACTCGGTTGGGATCGGGAGCAATG GCTATTTGAACAACTACTTCATGCCGCAGTATTACAATACTGCGAATAGGTTCACCCCTAAGGAGTACGCTGGTGACCTCATTGAGAGATACACTGAGCA ACTCAAGTTAGTCTCGTCAATTATCGAGTCCGAATCTGAAGCCAGAGACACGACTCTTGGATCTGATCCAGAAAGCCTTAACGAATCCCAGCCACCCAAA GATCGTTTCCCACATCTAACGGCTGAAAATAGAGGGTCATAA
AA sequence Show only first row Show all	>Lus10028394 pacid=23166104 polypeptide=Lus10028394 locus=Lus10028394.g ID=Lus10028394.BGIv1.0 annot-version=v1.0 MAANSFKIGQLNTLCWWTLFLHNVLATIAVAPYRVDFPNGPAGRFSNGKTTVDVIADLLGFDNYVPSYGDANASAAAGIRDETGKNLGGRIRFSGQVKNY IDTVSEIVRLEGDEDSAARYLRKCIYSVGIGSNGYLNNYFMPQYYNTANRFTPKEYAGDLIERYTEQLKLVSSIIESESEARDTTLGSDPESLNESQPPK DRFPHLTAENRGS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G18970			GDSL-like Lipase/Acylhydrolase...		Lus10028394 [exp]	0	1

Compare expression of checked genes

Lus10028394 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.