Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11000 364 / 8e-119 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT1G26700 318 / 4e-101 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT5G53760 314 / 2e-99 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT4G02600 274 / 1e-84 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 239 / 5e-72 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT1G61560 238 / 2e-70 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G33670 236 / 2e-70 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 231 / 4e-69 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT1G11310 233 / 9e-69 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT3G45290 230 / 2e-68 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041893 [exp] 1060 / 0 AT1G11000 353 / 1e-114 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10032669 [exp] 293 / 2e-91 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10043085 [exp] 284 / 4e-88 AT5G53760 776 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10001370 [exp] 247 / 1e-74 AT1G11000 406 / 1e-136 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10040388 [exp] 244 / 2e-72 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10001336 [exp] 240 / 7e-72 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10023506 [exp] 237 / 2e-69 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10026276 [exp] 234 / 2e-69 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 233 / 3e-68 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G111400 [exp] 534 / 0 AT1G11000 434 / 8e-147 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.004G218500 [exp] 370 / 5e-121 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.001G402400 [exp] 318 / 4e-101 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.011G121600 [exp] 286 / 6e-89 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.013G069900 [exp] 261 / 1e-79 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.009G011900 [exp] 250 / 9e-75 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.008G041400 [exp] 244 / 1e-72 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.001G078800 [exp] 238 / 2e-71 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.007G064200 [exp] 238 / 8e-71 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 237 / 4e-70 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10028440 pacid=23166036 polypeptide=Lus10028440 locus=Lus10028440.g ID=Lus10028440.BGIv1.0 annot-version=v1.0 ATGGCGTTGGCTTTGACCCCTACTTGGGCTGTTGGGACTGTAGTCACAGTTATGATTGCTTTTGGTTTCTTCTTCCAAAGGCTTCTCAAGTATTTTGGAG AGTTTTTGCACCGAACCAAGAGGAAGGCTTTATTATCAGCTCTCTACAAGATCAAAGATGAGCTGGTTCTATTTGGTCTTATTTCGTTGCTGATGGGTCA CTGGCTCACTTTGGTGGCCAAAATCTGTGTCAAAACGACATATTTGAACAGCCGGTTTTACTTCTGTGACTTGAAGAAAGCTTCAAACTTTAGTCGTATG GTTGCTTCAGTTTCACATCAGATTAACAACACAGTTGTTAGGGATAGTGAGTTTCATTCCGACTCCATTCGTGGACATTGTCCACCGGGACATGAATCAT TTGCTTCACATGATAGTCTTGAGCAGCTTCATCGTCTGATGTTTGTACTTGCTGTGACCCATGTTTCCTACAGCTTTGCTGCAATTGCCCTGGCTATGAT CAAGACTCATTTGAAGCTTCATCCCACAAAAGAAAAATGGGCAGACTATCTACCTTTATTCTTCATCATACAACACATCCCTGGAGCCAGCACAAATTCC TTGTTTGGGTGTTCCCAGCTTTGTTTCAGCCGGCAATTCTGGACTTCTATAACCAATGCTGATTACATGGCATTGCGTCTAGGGTTCATTACAACACACC AACTACCTTTAGTATATGATTTCCATAACTATATGCTCCGAAGCATGGAGGAAGAATTCTCCGACATAGTTGGCATTAGTCTGCCCCTCTGGTTTTACGC TATAGTCTGTGTCTTCCTGGACTTCCATGGAACACAAATCTACTTTTGGCTTTCTTTTCTTCCAGTCATTTTAGTCCTCGTGATCGGCACGAAGCTGCAC CGCATAGTGGTGAGATTGGCTGTCGAAATCCGGGATGCTTGTCAAACTTCAGGACATCACAGATTCAACCTGAGAGATGAGCTGTTCTGGTTTCGGAAAC CGAGATTGCTTCTGTGGTTGATACAGTTAGTATCCTTCCAGAATGCATTTGAGATGGCAACATTTTTATGGTCCTTGTGGGAAGTTAAAGATACTTCATG TTTCATGTCAAGCAAGAGTTTCGTCATTGTTCGTTTAGTATCTGGGGTGGTCTCACAAATCTGGTGCAGCTTCATCACTTTCCCACTCTACGTAATCGTC ACACAGATGGGTGGGAGGTTCAAAAGGACAGTAGTATCAGAGAACGTGTGGAGATCACTCCACGGATGGCAAAGAAGAGTAAAAGCCAGGAGGAGCCCTT ACAGCCAACTAGAAAGCGATAGAGTCACAATCAGAACCTCCAGTTCACGAGCAAGCAGCAGCAGGAAACTGCAGAAGAAATCTAATGGCTCAAGTAAGAG AACAGAAAGAGCCAACAGCAGAAGCAGGAGATTGGTGGAAGAACAACAATTGTCAGAAGCATCACTGCTCCATCACCAGCTGGATCCTTCAAGCTCACCA CCACCTGAAACTGATTCCATTTATGCCAGTGGAAGAGTTGCCTATGGTGATAATAACAGTACGGATGAGATTGTTGAGCTTCCAATTACTTGCTCCCAGC CTTCTTCTAGCAGGCTCACTGAAGATCACTTCTTTAGCTATAGGTCTGATGATAATGATTATGACGATGGTGATGATGATGATGGTTATGAAACTGATGC CACGGTTCCTCCCTATGATGGTTACGCTTATTACGACATTGACGATGATCGTCAACTGCATAATCATGATCCTCCACCGTATAGTGGATACTAG
AA sequence Show only first row Show all	>Lus10028440 pacid=23166036 polypeptide=Lus10028440 locus=Lus10028440.g ID=Lus10028440.BGIv1.0 annot-version=v1.0 MALALTPTWAVGTVVTVMIAFGFFFQRLLKYFGEFLHRTKRKALLSALYKIKDELVLFGLISLLMGHWLTLVAKICVKTTYLNSRFYFCDLKKASNFSRM VASVSHQINNTVVRDSEFHSDSIRGHCPPGHESFASHDSLEQLHRLMFVLAVTHVSYSFAAIALAMIKTHLKLHPTKEKWADYLPLFFIIQHIPGASTNS LFGCSQLCFSRQFWTSITNADYMALRLGFITTHQLPLVYDFHNYMLRSMEEEFSDIVGISLPLWFYAIVCVFLDFHGTQIYFWLSFLPVILVLVIGTKLH RIVVRLAVEIRDACQTSGHHRFNLRDELFWFRKPRLLLWLIQLVSFQNAFEMATFLWSLWEVKDTSCFMSSKSFVIVRLVSGVVSQIWCSFITFPLYVIV TQMGGRFKRTVVSENVWRSLHGWQRRVKARRSPYSQLESDRVTIRTSSSRASSSRKLQKKSNGSSKRTERANSRSRRLVEEQQLSEASLLHHQLDPSSSP PPETDSIYASGRVAYGDNNSTDEIVELPITCSQPSSSRLTEDHFFSYRSDDNDYDDGDDDDGYETDATVPPYDGYAYYDIDDDRQLHNHDPPPYSGY

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Lus10028440 [exp]	0	1
AT2G45490		ATAUR3	ataurora3 (.1)		Lus10034380 [exp]	1.0	0.8965
AT1G13030			sphere organelles protein-rela...		Lus10006465 [exp]	2.8	0.8576
AT4G03270		CYCD6;1	Cyclin D6;1 (.1)		Lus10018411 [exp]	5.1	0.7475
					Lus10040805 [exp]	7.7	0.7732
					Lus10000169 [exp]	8.5	0.7854
AT5G48905		LCR12	low-molecular-weight cysteine-...		Lus10021078 [exp]	10.1	0.8281
					Lus10038619 [exp]	10.5	0.7774
AT3G54940			Papain family cysteine proteas...		Lus10037951 [exp]	18.0	0.6993
AT5G57685		LSB1, ATGDU3	LESS SUSCEPTIBLE TO BSCTV 1, A...		Lus10008909 [exp]	18.3	0.7437
AT5G02280			SNARE-like superfamily protein...		Lus10010836 [exp]	20.7	0.7520

Compare expression of checked genes

Lus10028440 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.