Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G17930 6017 / 0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) AT4G36080 5842 / 0 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases (.1.2.3) AT1G50030 79 / 6e-14 TOR target of rapamycin (.1.2) AT5G40820 76 / 6e-13 ATATR, ATRAD3, ATR ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) AT3G48190 54 / 4e-06 PIG1, ATATM, ATM pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041910 [exp] 6818 / 0 AT2G17930 5862 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10041911 [exp] 1127 / 0 AT2G17930 989 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Lus10023991 [exp] 101 / 2e-20 AT5G40820 3276 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10025091 [exp] 100 / 4e-20 AT5G40820 3033 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Lus10037246 [exp] 82 / 9e-15 AT1G50030 4101 / 0.0 target of rapamycin (.1.2) Lus10035661 [exp] 78 / 2e-13 AT1G50030 2590 / 0.0 target of rapamycin (.1.2) Lus10023840 [exp] 62 / 2e-08 AT1G50030 239 / 2e-62 target of rapamycin (.1.2) Lus10019489 [exp] 57 / 3e-07 AT3G48190 3373 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G114300 [exp] 6551 / 0 AT2G17930 6266 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G057900 [exp] 5279 / 0 AT2G17930 5098 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.007G057850 [exp] 1132 / 0 AT2G17930 1074 / 0.0 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (.1) Potri.004G179000 [exp] 93 / 4e-18 AT5G40820 3459 / 0.0 ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related (.1) Potri.009G084500 [exp] 87 / 3e-16 AT1G50030 4038 / 0.0 target of rapamycin (.1.2) Potri.001G289200 [exp] 86 / 1e-15 AT1G50030 4080 / 0.0 target of rapamycin (.1.2) Potri.015G076650 [exp] 67 / 4e-10 AT3G48190 3584 / 0.0 pcd in male gametogenesis 1, ARABIDOPSIS THALIANA ATAXIA-TELANGIECTASIA MUTATED, ataxia-telangiectasia mutated (.1) Potri.004G147800 [exp] 60 / 6e-08 AT1G50030 252 / 2e-66 target of rapamycin (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0020 [flax] [poplar] TPR PF02259 [flax] [poplar] FAT FAT domain CL0016 [flax] [poplar] PKinase PF00454 [flax] [poplar] PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase
Representative CDS sequence Show only first row Show all	>Lus10028458 pacid=23166160 polypeptide=Lus10028458 locus=Lus10028458.g ID=Lus10028458.BGIv1.0 annot-version=v1.0 ATGCAAACGAGACTGCAGATGGCGATGGAAGTTCGCGACAGTCTCGAAATTGCACACACTCCAGAGTACTCGAACTTCCTGAAGTGCTACTTCCGAGCAT TCTCAGCTATTCTTCTACAAATTACCAAGCCACAGTTCATAGACAACCCGGAGCACAAGCTTCGGAATATAGTTGTGGAGATACTCAACCGTTTGCCTCA CAGTGAAGTTCTCCGACCCTTTGTTCAGGATCTATTGAAGGTTGCGATGCAAGTGCTCACTACAGACAATGAGGAGAATGGATTGATTTGCATCCGTATC ATCTTTGATCTTCTGAGGAACTTCAGGCCCACTCTAGAAAATGAAGTTCAACCATTCTTGGATTTTGTGTGCAAAATTTACCAGAACTTCAGCTTGACCG TTAGCCATTTCTTTGATAATATGACTGCAACTCAGGAGGATGTCAAGCCAATGGAGACTTCTTCTTCTTCAGACCAAGGGATCATGTCTAGTGGATATGT CGGGAATGGTCAGCTTAATCCAAGTACTAGGTCATTTAAAGTGGTTACGGAGAGTCCGCTCGTGGTGATGTTTCTATTCCAATTGTACAGTCGACTTGTT CAAACTAATATTCCGACTCTGTTACCTCTAATGGTTGATGCAATATCTGTTCCTGGCCCAGACAAGGTTCCTCCTCATTTAAAGAGTCATTTTATCGAAC TCAAGGGAGCACAAGTTAAGACAGTTTCCTTTTTAACTTACCTGCTGAAGAGCTTCAGTGATTACATCAGATCCCAAGAAGACCGTATATGTAAAAGCAT TGTAAACTTGCTAGTTACGTGCTCAGATTCGGTATCTATTAGAAGGGAACTGTTAGTTGCTTTGAAACATGTTCTTGGAACGGATTTCAAAAGGGGATTA TTTCCTTTGATTGACACACTTTTAGAAGAGAGAGTTCTAGTTGGAGCTGGTCGTGCGTGCTATGAGACTTTGAGGCCATTAGCGTACAGTCTACTGGCAG AGATTGTCCATCATGTTAGAAGTGACCTCTCATTACCCCAGTTATCGCGTATCATCTATCTATTTTCAAGTAACATGCACGATGCTTCTTTGTCACTCAG CATTCATACAACATGTGCACGTTTGATGTTGAATCTGGTAGAGCCTATTTTTGAGAAGGGTGTGGACCAACCCTCTATGGATGAAGCTCGAGTTCTATTA GGGCGCATTTTGGATGCTTTTGTTGGCAAGTTCAGTACTTTCAAACGAACCATTCCACAGCTGTTGGAAGAAGGGGAAGAAGGAAAAGAGCGTGCTTCCT TAAGATCAAAGCTTGAACTTCCTGTGCAGGCTGTTCTAAACTTGCAAGTCCCTGTGGAACATTCTAAGGAAGTCACTGATTGTAAGAATCTGATTAAAAC CTTAGTCATGGTGCTTCTGGTTGGCAGTCCTCTGGGTTGTTCTTTTATAGTTAGTGTTCCTGAGATAATGATTCTTCGGCTGATCTCAGGAATGAAGACC ATCATTTGGAGCATTACTCATGCACATTTGCCTAGATCACAGGTTTCCCCTTCCACGCATGGGGGGCAGTCCCAGGTCCTTGTTTCACAGCCCCCCAACT TGCCAGCTCAGCAAGCCTTCAAAGGGATGAGAGAAGATGAGTTGTGGAAAGCATCAGGTGTTCTAAAGAGTGGGGTTCATTGCCTAGCCCTCTTCAAGGA AAAAGACGAAGAGAGGGACATGCTAAACCTCTTCTCGCAGATTTTGGGTATCATGGAACCTCGAGATCTAATGGATATGTTCTCCTTGTGCTTGCCCGAG CTTTTTGAGTGCATGATTAATAACACTCAGCTGGTTCATATTTTCTCTTCTCTTCTGCAATCCCCGAAAGTGTACCGGCCGTTTGCTGATGTATTGGTTA ATTTTCTTGTAATCAGCAAACTTGATGCTCTAAAGCTCCCAGATTCACCTGCTGCTAAATTGGTTCTGCACCTTTTTAGGTTTATATTTGGTGCTGTTGC CAAAGCTCCTTCAGATTTTGAACGGATTTTGCAGCCACATGTTCCTGTCATTATGGAGGTTTGTATGAAGAACGCTACTGAAGTCGAGAAACCTCTTGGC TTTCTGCAACTTCTTCGTACTATGTTTAGAGCTCTTGCAGGATGTAAATTTGAACTTCTGCTACGAGACCTGATTCCTATGTTACAACCCTGCCTGAATA TGTTGCTGACAATGCTCGAAGGTCCAACTGGGGAAGACATGATAGACCTTCTGCTGGAACTATGCCTGACATTGCCTGCACGATTAAGCTCATTGCTGCC TTATCTTCCCCGTCTGATGAGGCCGCTTGTGTTGTGTCTGAAAGGAGGTGATGATCTGGTGAATCTAGGATTAAGGACACTTGAATTTTGGGTGGATAGT CTGAATCCTGATTTCTTGGAACCAAGTATGGCTACTGTGATGTCTGAGGTGATTTTGGCCTTGTGGTCTCACTTGAGACCTCCGCCCTATCCTTGGGGTG GGAAGGCATTACAACTTCTGGGAAAGTTAGGTGGTCGTAATAGACGTTTTCTTAAGGATCCCCTCTCTCTTGAGTGTAAAGAGAACCCTGAACATGGACT TCGGTTGATTCTTACATTTGAACCCTCAACTCCATTTTTGGTGCCCCTTGATCGGTGTATAAATCTTGCTGTAGCAGCCGTCATGCACAAAAATAATTGT GTAAATGCATTTTACAGAAAACAGGCACTGAAGTTCCTCCGTGTTTGTTTAGCTTCTCAGCTCAATCTGCCAGGAAGTATATCTGATGAGGGATATACTG GCAAGCAGTTGTCAACATTATTGGTTTCTGTCACAGACTCGTCTTGGCGTAGATCTGAGACATCTGACATAAAGGCAGACCTGGGTGTGAAGACAAAGAC CCAACTGATGGCTGAGAAGTCTGTATTCAAGATCCTACTAATGACAATAGTTGCAGCCAATTCAGAACCAGAGCTTCAAGATCCTGGGGATGATTTTGTT GCCAATGTCTGTCGTCATTTTGCAATGATTTTTCATGTGGATCATACACCAACTAACTCTTCAACTGTTACCAACAGTGTTGGCGGTTCCATTTCCAGGC CAAGGAATAAGTCCTGCTTCAATCTTAAAGAGTTGGACCCTTTGCTATTTTTGGATGCATTGGTCGATGTGCTGGCTAGTGAGAATAGGGTCCACGCAAA AGCAGCTCTTAGTGCCTTAAATGTGTTTGCAGAGACGCTTCTTTTTCTTGCTCGTTCAAAACATTCCGATGTTCAGATGTCAAGAGGTGGGCCCAGTACC CCAATGATTGTTTCTAGTCCATCTATGAATCCTGTCTATTCGCCACCACCTAGTGTTCGTGTTCCAGTGTTTGAGCAGCTTCTGCCTCGCCTCCTACATT GTTGCTATGGAAGCACTTGGCAAGCTCAAATGGGTGGTGTTATGGGACTGGGTGCTTTAGTAGGCAAGGTTACTGTTGAAACATTGTGTGTCTTCCAAGT AAGAATTGTTCGAGGTTTGGTGTATGTACTCAAAAGAATTCCTATTTATGCAAGCAAAGAGCAGGAAGAAACAGGTCAAGTGCTTACTCAAGTCCTACGG GTTGTAAATAATGTTGATGAAGCAAACAGTGAACCTCGTAGGCAAAGTTTTCAAGGAGTAGTTGATTTTTTGGCATCAGAACTGTTTAATCCCAATGCTT CAATTATTGTACGGAGAAATGTGCAGTCATGCTTGTCACTTTTGGCCAGTAGAACGGGTAGTGAGGTATCAGAGCTGCTTGAGCCTTTGTATCAGCCTTT GCTTCAGCCTCTCATAATGCGGCCACTTCGCTCGAAGACAGTTGATCAACAGATTGGAGCAGTTACTGCTTTGAATTTTTGCCTGGCCCTGCGCCCCCCC CTCCTCAAACTTACACAAGAACTGGTGAACTTCCTGCAAGAAGCATTGCAAATAGCTGAGGCAGATGAAACTGTATGGGCTGCTAAGTTGATGAACCCAA AAGTGACTACCTCACTAAACAAGCTTAGAACAGCTTGTATAGAGCTCCTCTGTACCACAATGGCATGGGCTGATTTCAAAACTCCAAATCATTCTGAGTT GCGTTCGAAAATCATTTCCATGTTCTTCAAATCGTTGACATGCCGGACACCGGAGATTGTTGCTGTTGCCAAAGAAGGCCTGAGACAGGTTATTAATCAG CAACGAATGCCCAAGGAATTATTACAGAGCAGCCTAAGGCCTATATTAGTCAATTTAGCTCACACCAAGAACCTTAGCATGCCTCTGTTGCAAGGCCTTG CCCGTCTGCTTGAACTGCTGTCCAATTGGTTTAATGTTACTTTGGGTGGCAAACTGTTAGAACACCTTAAGAAGTGGTTGGAACCTGATATGCTTGCACA AAGTCTGAAATCATGGAAAGCTGGTGAAGAGCCAAAAATCGCAGCTGCTATTATAGAGCTTTTTCACTTGCTTCCTCTTGCTGCTTCCAAGTTCCTCGAT GAACTTGTGACATTGACCATCGATTTGGAAAAAGCTCTACCTGCTGGACAAGTCTACAGTGAGATAAACAGCCCATATCGCCTGCCACTGACTAAATACT TGAATCGTTATTCCACTCTTGCTGTTGATTATTTTCTTGCTAGACAGAACGATCCAAAATACTTCAGGAGGTTCATGTACATCATACGATCAGATGCTGG GCAACCTCTGAGAGAGGAACTTGCAAAGTCAGCACAGAAGATTCTTGCTACTGCGTTCCCTGATTTTGTACCAAAACCTGAGGCTGGAGCAGTTTCTGAA TCATCAACTCAAGCCATGGGATTAGTGGGTGATGATACTAAAATGACTTCGCCTGCAGATATTAAAAATATAACAGCAGCTTCAGATGCCTACTTTCATG GGCTTGCTTTGGTTAAAACATTGGTGAAAGTAATACCTTCGTGGCTGCAGAGCAATCACACGGTATTCGATACTTTGGTACTTGTATGGAAGTCACAAGC AAGAATATCTCGTTTGCATAATGAACAAGAGCTGAACTTGGTGCAAGTTAAAGAGAGCAAATGGCTTATAAAATGCTTCCTGAATTATTTGCGGCTTGAC AAAAGTGAACTCAATGTGCTTTTTGATATACTGTCTATCTTCCTATCTCACAGTCGTATTGACTACACCTTTCTCAAGGAGTTCTATATAGTTGAGGTGG CAGAAGGGTATCCACCGAACATGAAGAAAGCACTGCTTTTGCATTTTCTGAATCTTTTTCAAACAAAACAACTTGGTCATGACCATCTGGTGATTGTCAT GCAAATGCTCATTCTTCCTATGCTTGCTCATGCCTTCCAGAATGGCCAAAGTTGGGAGGTTGTTGACTCTGCTATTATCAAGACAATTGTTGACAAACTT CTTGATCCGCCAGAGGAGGTCTCTGCAGAATATGATGAGCCTTTGAGGATAGAACTTTTGCAACTTGCTACTCTTCTTCTTAAATACCTCCAAAGTGACC TTGTGCACCATAGGAAGGAACTGATTAAGTTTGGTTGGAATCACCTCAAACGTGAGGATAGTGCTAGCAAGCAATGGGCATTTGTAAATGTTTGCCATTT TTTGGAGGCCTATCAGGCTCCAGAAAAAATAATACTGCAGGTGTTTGTTGCGCTTCTTAGAACTTGCCAACCAGAGAATAAGCTGCTTGTAAAGCAAGCT TTGGACATTCTGATGCCAGCATTACCCCGAAGATTACCTCTGGGTGAATCTCGTATGCCAATTTGGATCCGATACACCAAAAAGATTCTTGTTGAAGAAG GCCACTCACTTCCTAATCTGATTCACATTTTCCAGTTGATTGTGCGCCATTCAGATCTCTTCTATGGTTGCAGAGCACAATTCGTTCCTCAAATGGTCAA CTCTCTCAGCCGACTTGGATTGCCATATAATACTACAACAGAGAATAGGCGTCTTGCCATTGAACTGGCTGGTTTAGTTGTTGGTTGGGAAAGACAGAGG CAGAATGAAATGAAAGTTGATGCTGATGTTCCCCGCAATGATGGATATAACTCCGGCTCTGTTGTTGTTGATCCAAAACGAACAGTTGATGGATCTACAT ACCCTGAAGACCCAAGTAAAAGAGTTAAGCTGGAACCTGGTCTTCAATCCCTTTGTGTGATGTCCCCTGGTGCAACTTCAATCCCTAATGTGGAGACCCC TGGATCTGGTGGACAACCTGATGAAGAATTCAAGCCCAACGCTGCTATGGAAGAAATGATCATCAATTTTCTTATTCGGGTTGCGTTGGTTATTGAGCCA AAGGAAAAGGAAGCAAGTACCATGTACAAACAAGCTTTAGAGTTGCTTTCACAAGCTCTTGAGGTCTGGCCAAGTGCCAATGTAAAATTCAACTATCTAG AGAAACTGCTCAGCAGCATCCAGCCATCACAGTCGAAGGATCCTTCAACAGCCCTTGCACAGGGCTTGGATGTCATGAACAAGGTTTTGGAGAAACAGCC TCATTTGTTCATTAGAAATAATATTAGTCAGATTTCTCAGATTCTGGAACCGTGTTTCAAGCACAAAATGTTGGACGCTGGGAAATCATTGTCCACCCTT CTGAAGATGGTCTTTGTTGCTTTTCCACCGGATGCACCTAGCACACCCACAGATGTTAAATTATTGTTTCAGAAGGTTGATGAGCTGATACAAAGGCATA TTAGCATTGTCACTGCATCCCAATCAACAGGGGATGATAACTCTGGTAGTGCGATTGCCTTCGTGCTACTTGTTATAAAAACCTTGACAGAAGTAGAGAA GAACATTGATCCGTTCATCTTGGGTCGTATTCTTCAGCGGCTGTCACGTGACATGGGTTCATCAGTAAATTCACATTTAAGACAGGGTCAGCGTACCGAT CCTGATTCAGCAGTTTCTTCGTCACGCCAAGGTGTGGATTCTGGAGCAGCCATTTCTAATCTGACGTCTGTATTAAAGCTTATAAACGACAAGGTCATGG CTGTTCCAGAATGTAAAAGATTAGTGACACAAGTGTTGAATGCTTTGCTGTCAGAGAAAGGCACTGATTCTAGCGTGCTTCTCTGCATACTAGATGTGCT AAAAGGGTGGGTTGAAGATGATTTCTGCAAACCAGGAGTAGTCACATCAAGTGCCTTCCTTAATCCTAAGGAAATTATTTCATTGCTTCAAAAGTTATCA CAAGTCGATAAGCAGAACTTCTCCACTCATTCTTTGGAAGAGTGGGATAGAAAATATCTGCAGATGCTTTATGGAATATGCGCGGACTCAAATAAATATC CACTAGCTTTACGTCAGGAGGTATTTCAGAAGGTTGAACGGCAGTTCATGCTTGGTTTAAGGGCGAGGGACCCTGAAATGAGAATGAAGTTTTTCTTACT CTATCATGAATCTCTTGGGAAATCATTGTTTACGAGGTTGCAGTATATTATCCAAATTCAGGATTGGGAAGCTCTCAGTGATGTTTTCTGGCTCAAGCAG GGGCTTGATCTTCTTTTGGCGATCTTAGTTGAAGATAAGCCCATCACACTTGCTCCAAACTCTGCTCGAGTGCTGCCGCTAGTTGTTTCAGGTTCTCTTC CTGACGGTTCTGTAATGCCACAAGCTATGGACGTGTCAGAGGGTGCAGTTGAGGCTCCACTAACATTTGATGGTCTTGTCCTCAAGCATGCTCAGTTTCT GAATGGAGCAAGTAAACTCCAGGTTTCTGATCTTGTCCTTCCACTACGAGAGCTGGCTCACACAGACTCCAATGTTGCATATCATTTGTGGGTGCTTGTA TTCCCTATTGTATGGGTGACACTACACAAGGAAGAACAAGTAGCATTAGCTAAGCCTATGATCACTCTGCTATCTAAAGATTATCACAAGAAACAGCAAG GCAGCAGACCAAATGTTGTCCAAGCACTCTTAGAGGGTCTCCAATTGAGCCATCCTCAGCCTCGGATGCCTAGTGAACTCATTAAGTACATTGGGAAAAC GTACAATGCATGGCACATTGCATTGGCTTTATTGGAAAGCCATGTGGTGTTGTTCATGAATGATACCAAGTGTTCTGAATCACTGGCTGAACTTTATCGC TTACTCAATGAAGAAGATATGAGATGCGGACTCTGGAAAAAAAGATCAATCACCGCAGAGACAAAGGCCGGACTTTCACTTGTTCAGCATGGTTACTGGC ACCGTGCTCAAAGCTTCTTTTATCAGGCCATGGTTAAGGCAACTCAAGGTACATATAACAATACAGTTCCTAAAGCTGAGATGTGTCTGTGGGAAGAACA ATGGCTTTACTGTGCAAGCCAACTTAGTCAGTGGGATGCATTGGTTGATTTTGGAAAAAGTATTGAGAATTATGAGATACTTCTTGATACGCTATGGAAG TTGCCTGATTGGGGATTCATGAAGGATCATGTATTTCCCAAAGCTCAAGTTGAAGAAACTTCAAAACTTCGTCTCATCCAGGCATTCTTTGCTCTTCATG ATAAAACTGCAAATGGTGTTTCGGATGCTGAAAGCATAGTTGGAAAAGGAGTCGATCTTGCTCTTGAGCAATGCTGGCAGTTGCCTGAAATGTCTGTCCA TGCTAAGATTCCTCTGTTGCAGCAATTCCAGCAACTTGTGGAAGTCCAGGAGTCTGCACGTATTATTGTGGACATTACAAATGGGAATAAAATGTCTGCC AGTTCTGTGGTTGGCGTGCATGGAAATCTCTATGCGGATCTCAAGGATATTCTTGAGACATGGAGATTAAGAACACCAAATGAATGGGATAATATGTCTG TTTGGTTTGATCTTCTGCAATGGAGAAATGAAATGTATAATTCTGTCATTGAAGCATTTAAGGAATTTGCAACTACAAACCAACAACTTCATCACCTTGG CTATCGGGACAAAGCATGGAATGTGAATAAGCTTGCTCATATTGCTCGTAAACAAGGCCTTCATGATGTTTGTGTGACAATTCTTGAAAAATTATATGGT CATTCGACCATGGAAGTGCAGGAGGCTTTTGTTAAGATAAGAGAGCAGGCAAAGGCTTATCTGGAGATGAGAGGCGAACTGACAAGTGGTCTCAACTTGA TTAGCAGCACTAATTTGGAATATTTTCCCGTTAAACACAAAGCAGAAATATTCCGTCTGAAGGGAGATTTTCTTTTGAAGTTAAATGATTCTGAAGGTGC TAATCTTGCATATTCCAATGCCATCACCCTTTTCAAAAATTTACCTAAAGGGTGGATAAGCTGGGGAAATTATTGTGATCTGGCTTATAGGGAAACTCAT GATGAGATTTGGTTAGAATATGCCGTTAGCTGCTTTCTTCAGGGCATCAAATTTGGTGTTTCCAATTCGAGGAGCCATCTGGCTAGGGTTCTTTATCTTC TTAGTTTTGACACTCCCAATGAGCCTGTTGGAAGATCATTTGATAAATGCTTGGACCAAATACCACACTGGGTTTGGCTTGCATGGATTCCGCAGTTGTT GCTTTCCTTACAGAGGACAGAGGCACCTCATTGCAAACTTGTTCTTCTGAAAATTGCTGCTGTGTACCCACAGGCTCTTTATTATTGGCTCCGCACATAT TTGCTTGAGCGCCGTGATGTTGCCAACAAGTCTGAACTTGGTAGACTAGCAATGGCCCAGCATAGAATGCAGCAAAATGCCACTGCTTCTACAGCTGGTT CTTTGGGATTGGCTGATGGAAATGGCAGAGTACAAGTTCACAGTGGTGGTAATATGCCCACTGACAATCAAGCTCAACAAGGTCACAACATAGGTGGAAT GGCACCTCATGATGGTGGAAACTCTCATGGGCAAGAAGCCGAGAGGTCCGGACCAACTGAAAGTGGCGGGCATGGTGGGAAAGACCAATCTTCGCAGCAG ACATCTTCTGCAATGAGTGAAGGTGGTCATAGTGTCAGGCGTAGTGCTCCAACTGCGGTGGTTGCTTCTGCGGCTAGTGCTTTTGATGCAGCAAAGGATA TCATGGAGGCTCTTAGGACTAAGCACACTAATTTGGCTAGTGAGCTTGAGGTTCTTCTTACGGAGATTGGTTCGCGTTTTGTTACTCTTCCAGAGGAAAG ACTTCTTGCAGTTGTTAACGCCCTGCTTCATCGCTGTTACAAGTACCCAACTGCTACCACAGCTGAGGTCCCTCAATCCCTCAAGAAGGAACTCTCTGGC GTTTGCAGGGCTTGCTTTTCTGCTGATGCCGTGAACAAACATGTTGATTTTGTGAGAGAGTACAAACAAGATTTTGAACGTGATCTTGATCCAGAAAGTA CATCTACTTTCCCTGGAACACTCTCAGCACTGACTGAGAGATTGAAACACTGGAAAAATATCCTTCAAAGCAATGTTGAGGATCGTTTTCCAGCTGTCTT GAAGCTCGAGGAAGAAAGTAGGGTCTTGCGCGACTTCCATGTTGTTGATGTAGAGGTTCCTGGGCAGTATTTCAGTGATCAGGAAGTTGCACCAGATCAT ACTGTTAAGCTGGATAGGGTTGGAGCTGACATACCAATTGTTAGAAGGCATGGCAGCAGTTTCCGTCGGTTGACTCTGATAGGATCAGATGGTTCTCAGC GTCATTTTATCGTCCAAACTTCGCTGACCCCTAATGCAAGGAGTGATGAACGTATGCTGCAACTATTCCGTGTAATGAACCAGATGTTTGACAAGCACAA GGAATCAAGACGTAGGCACATATCCATTCATACTCCAATCATCATTCCTGTTTGGTCCCAGGTACGAATGGTTGAAGATGATGTTATGTACAGCACTTTC TTGGAGGTGTACGAAAACCATTGTGCAAGAAATGACCGAGAAGCTGATCTCCCAATTACATATTTCAAGGAGCAACTGAACCAGGCCATATCTGGCCAAG TTTCTCCTGAAGCTATAGTAGATCTCCGCCTCCAAGCATATAGTGACATAACAAAGAACTTGGTGACCGACGGCATCTTTTCCCAGTACATGTACAAGAC TCTTCCCAGTGGTAACCATATGTGGGCTTTCAAGAAGCAATTCGCCACACAGTTGGCTCTTTCAAGTTTCATGTCCTACATGCTGCAAATTGGGGGCAGG TCTCCTAACAAGATACTATTTGCCAAGAACACGGGGAAGATATTCCAGACAGATTTTCACCCAACGTATGATGCCAATGGACTGGTGGAGTTCACGGAAC CGGTACCCTTTCGGCTGACTAGAAACATGCAAGCATTTTTCTCGCATTTTGGCGTTGAAGGTCTTATAGTGTCTTCAATGTGTGCTGCTGCACAAGCTTT GGTCTCTCCGAAGCAAAGTCAACACTTGTGGCACCAGTTAGCTATGTTTTTCCGTGACGAGCTGGTGTCTTGGTCGTGGAGAAGGCCTCATGGGGTGCCT ATTCCATCGGCAGGAGGCTCTGGCACGAATCCTGTGGATTTCAAGCTCAAGGTGATAAGCAATGTGGACCATGTCATCAACCGGATCAATGCCATAGCTC CACAGTTCCTGTCAGAAGAGGAGGACAACACGATGGATCCGCCACAGTCGGTGCAGAGGGGAGTGAACGAGTTGGTTGAGGCTGCCCTGACGCCGAGGAA CTTGTGTATGATGGATCCAACTTGGCATCCATGGTTCTAA
AA sequence Show only first row Show all	>Lus10028458 pacid=23166160 polypeptide=Lus10028458 locus=Lus10028458.g ID=Lus10028458.BGIv1.0 annot-version=v1.0 MQTRLQMAMEVRDSLEIAHTPEYSNFLKCYFRAFSAILLQITKPQFIDNPEHKLRNIVVEILNRLPHSEVLRPFVQDLLKVAMQVLTTDNEENGLICIRI IFDLLRNFRPTLENEVQPFLDFVCKIYQNFSLTVSHFFDNMTATQEDVKPMETSSSSDQGIMSSGYVGNGQLNPSTRSFKVVTESPLVVMFLFQLYSRLV QTNIPTLLPLMVDAISVPGPDKVPPHLKSHFIELKGAQVKTVSFLTYLLKSFSDYIRSQEDRICKSIVNLLVTCSDSVSIRRELLVALKHVLGTDFKRGL FPLIDTLLEERVLVGAGRACYETLRPLAYSLLAEIVHHVRSDLSLPQLSRIIYLFSSNMHDASLSLSIHTTCARLMLNLVEPIFEKGVDQPSMDEARVLL GRILDAFVGKFSTFKRTIPQLLEEGEEGKERASLRSKLELPVQAVLNLQVPVEHSKEVTDCKNLIKTLVMVLLVGSPLGCSFIVSVPEIMILRLISGMKT IIWSITHAHLPRSQVSPSTHGGQSQVLVSQPPNLPAQQAFKGMREDELWKASGVLKSGVHCLALFKEKDEERDMLNLFSQILGIMEPRDLMDMFSLCLPE LFECMINNTQLVHIFSSLLQSPKVYRPFADVLVNFLVISKLDALKLPDSPAAKLVLHLFRFIFGAVAKAPSDFERILQPHVPVIMEVCMKNATEVEKPLG FLQLLRTMFRALAGCKFELLLRDLIPMLQPCLNMLLTMLEGPTGEDMIDLLLELCLTLPARLSSLLPYLPRLMRPLVLCLKGGDDLVNLGLRTLEFWVDS LNPDFLEPSMATVMSEVILALWSHLRPPPYPWGGKALQLLGKLGGRNRRFLKDPLSLECKENPEHGLRLILTFEPSTPFLVPLDRCINLAVAAVMHKNNC VNAFYRKQALKFLRVCLASQLNLPGSISDEGYTGKQLSTLLVSVTDSSWRRSETSDIKADLGVKTKTQLMAEKSVFKILLMTIVAANSEPELQDPGDDFV ANVCRHFAMIFHVDHTPTNSSTVTNSVGGSISRPRNKSCFNLKELDPLLFLDALVDVLASENRVHAKAALSALNVFAETLLFLARSKHSDVQMSRGGPST PMIVSSPSMNPVYSPPPSVRVPVFEQLLPRLLHCCYGSTWQAQMGGVMGLGALVGKVTVETLCVFQVRIVRGLVYVLKRIPIYASKEQEETGQVLTQVLR VVNNVDEANSEPRRQSFQGVVDFLASELFNPNASIIVRRNVQSCLSLLASRTGSEVSELLEPLYQPLLQPLIMRPLRSKTVDQQIGAVTALNFCLALRPP LLKLTQELVNFLQEALQIAEADETVWAAKLMNPKVTTSLNKLRTACIELLCTTMAWADFKTPNHSELRSKIISMFFKSLTCRTPEIVAVAKEGLRQVINQ QRMPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPDMLAQSLKSWKAGEEPKIAAAIIELFHLLPLAASKFLD ELVTLTIDLEKALPAGQVYSEINSPYRLPLTKYLNRYSTLAVDYFLARQNDPKYFRRFMYIIRSDAGQPLREELAKSAQKILATAFPDFVPKPEAGAVSE SSTQAMGLVGDDTKMTSPADIKNITAASDAYFHGLALVKTLVKVIPSWLQSNHTVFDTLVLVWKSQARISRLHNEQELNLVQVKESKWLIKCFLNYLRLD KSELNVLFDILSIFLSHSRIDYTFLKEFYIVEVAEGYPPNMKKALLLHFLNLFQTKQLGHDHLVIVMQMLILPMLAHAFQNGQSWEVVDSAIIKTIVDKL LDPPEEVSAEYDEPLRIELLQLATLLLKYLQSDLVHHRKELIKFGWNHLKREDSASKQWAFVNVCHFLEAYQAPEKIILQVFVALLRTCQPENKLLVKQA LDILMPALPRRLPLGESRMPIWIRYTKKILVEEGHSLPNLIHIFQLIVRHSDLFYGCRAQFVPQMVNSLSRLGLPYNTTTENRRLAIELAGLVVGWERQR QNEMKVDADVPRNDGYNSGSVVVDPKRTVDGSTYPEDPSKRVKLEPGLQSLCVMSPGATSIPNVETPGSGGQPDEEFKPNAAMEEMIINFLIRVALVIEP KEKEASTMYKQALELLSQALEVWPSANVKFNYLEKLLSSIQPSQSKDPSTALAQGLDVMNKVLEKQPHLFIRNNISQISQILEPCFKHKMLDAGKSLSTL LKMVFVAFPPDAPSTPTDVKLLFQKVDELIQRHISIVTASQSTGDDNSGSAIAFVLLVIKTLTEVEKNIDPFILGRILQRLSRDMGSSVNSHLRQGQRTD PDSAVSSSRQGVDSGAAISNLTSVLKLINDKVMAVPECKRLVTQVLNALLSEKGTDSSVLLCILDVLKGWVEDDFCKPGVVTSSAFLNPKEIISLLQKLS QVDKQNFSTHSLEEWDRKYLQMLYGICADSNKYPLALRQEVFQKVERQFMLGLRARDPEMRMKFFLLYHESLGKSLFTRLQYIIQIQDWEALSDVFWLKQ GLDLLLAILVEDKPITLAPNSARVLPLVVSGSLPDGSVMPQAMDVSEGAVEAPLTFDGLVLKHAQFLNGASKLQVSDLVLPLRELAHTDSNVAYHLWVLV FPIVWVTLHKEEQVALAKPMITLLSKDYHKKQQGSRPNVVQALLEGLQLSHPQPRMPSELIKYIGKTYNAWHIALALLESHVVLFMNDTKCSESLAELYR LLNEEDMRCGLWKKRSITAETKAGLSLVQHGYWHRAQSFFYQAMVKATQGTYNNTVPKAEMCLWEEQWLYCASQLSQWDALVDFGKSIENYEILLDTLWK LPDWGFMKDHVFPKAQVEETSKLRLIQAFFALHDKTANGVSDAESIVGKGVDLALEQCWQLPEMSVHAKIPLLQQFQQLVEVQESARIIVDITNGNKMSA SSVVGVHGNLYADLKDILETWRLRTPNEWDNMSVWFDLLQWRNEMYNSVIEAFKEFATTNQQLHHLGYRDKAWNVNKLAHIARKQGLHDVCVTILEKLYG HSTMEVQEAFVKIREQAKAYLEMRGELTSGLNLISSTNLEYFPVKHKAEIFRLKGDFLLKLNDSEGANLAYSNAITLFKNLPKGWISWGNYCDLAYRETH DEIWLEYAVSCFLQGIKFGVSNSRSHLARVLYLLSFDTPNEPVGRSFDKCLDQIPHWVWLAWIPQLLLSLQRTEAPHCKLVLLKIAAVYPQALYYWLRTY LLERRDVANKSELGRLAMAQHRMQQNATASTAGSLGLADGNGRVQVHSGGNMPTDNQAQQGHNIGGMAPHDGGNSHGQEAERSGPTESGGHGGKDQSSQQ TSSAMSEGGHSVRRSAPTAVVASAASAFDAAKDIMEALRTKHTNLASELEVLLTEIGSRFVTLPEERLLAVVNALLHRCYKYPTATTAEVPQSLKKELSG VCRACFSADAVNKHVDFVREYKQDFERDLDPESTSTFPGTLSALTERLKHWKNILQSNVEDRFPAVLKLEEESRVLRDFHVVDVEVPGQYFSDQEVAPDH TVKLDRVGADIPIVRRHGSSFRRLTLIGSDGSQRHFIVQTSLTPNARSDERMLQLFRVMNQMFDKHKESRRRHISIHTPIIIPVWSQVRMVEDDVMYSTF LEVYENHCARNDREADLPITYFKEQLNQAISGQVSPEAIVDLRLQAYSDITKNLVTDGIFSQYMYKTLPSGNHMWAFKKQFATQLALSSFMSYMLQIGGR SPNKILFAKNTGKIFQTDFHPTYDANGLVEFTEPVPFRLTRNMQAFFSHFGVEGLIVSSMCAAAQALVSPKQSQHLWHQLAMFFRDELVSWSWRRPHGVP IPSAGGSGTNPVDFKLKVISNVDHVINRINAIAPQFLSEEEDNTMDPPQSVQRGVNELVEAALTPRNLCMMDPTWHPWF

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G17930			Phosphatidylinositol 3- and 4-...		Lus10028458 [exp]	0	1
AT2G17930			Phosphatidylinositol 3- and 4-...		Lus10041910 [exp]	1.0	0.9883
AT2G24430	NAC	ANAC039, ANAC03...	Arabidopsis NAC domain contain...		Lus10022965 [exp]	4.0	0.9550
AT3G05680		EMB2016	embryo defective 2016 (.1.2)		Lus10013587 [exp]	4.6	0.9541
AT5G16270		SYN4, ATRAD21.3	ARABIDOPSIS HOMOLOG OF RAD21 3...		Lus10020233 [exp]	5.3	0.9510
AT5G07940			unknown protein		Lus10021621 [exp]	6.3	0.9209
AT5G02950			Tudor/PWWP/MBT superfamily pro...		Lus10023486 [exp]	12.3	0.9432
AT5G47690			binding (.1.2.3)		Lus10039082 [exp]	12.7	0.9317
AT1G80070		EMB33, EMB177, ...	ABNORMAL SUSPENSOR 2, EMBRYO D...		Lus10011489 [exp]	12.8	0.9402
AT3G24870			Helicase/SANT-associated, DNA ...		Lus10022788 [exp]	13.8	0.9412
AT5G42950			GYF domain-containing protein ...		Lus10032720 [exp]	15.0	0.9433

Compare expression of checked genes

Lus10028458 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.