Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G43670 617 / 0 FINS1, AtcFBP FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) AT3G54050 342 / 6e-116 HCEF1 high cyclic electron flow 1 (.1.2) AT5G64380 236 / 1e-74 Inositol monophosphatase family protein (.1) AT3G55800 97 / 3e-22 SBPASE sedoheptulose-bisphosphatase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018885 [exp] 693 / 0 AT1G43670 620 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Lus10027748 [exp] 335 / 2e-113 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10035545 [exp] 335 / 2e-113 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10021115 [exp] 325 / 3e-109 AT3G54050 647 / 0.0 high cyclic electron flow 1 (.1.2) Lus10017195 [exp] 308 / 1e-102 AT3G54050 601 / 0.0 high cyclic electron flow 1 (.1.2) Lus10007061 [exp] 232 / 5e-73 AT5G64380 549 / 0.0 Inositol monophosphatase family protein (.1) Lus10020433 [exp] 218 / 5e-68 AT5G64380 528 / 0.0 Inositol monophosphatase family protein (.1) Lus10040228 [exp] 99 / 4e-23 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1) Lus10028261 [exp] 99 / 4e-23 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G191400 [exp] 644 / 0 AT1G43670 609 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.002G069000 [exp] 630 / 0 AT1G43670 619 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.016G106900 [exp] 334 / 4e-113 AT3G54050 619 / 0.0 high cyclic electron flow 1 (.1.2) Potri.016G109000 [exp] 320 / 3e-107 AT3G54050 526 / 0.0 high cyclic electron flow 1 (.1.2) Potri.017G042900 [exp] 233 / 7e-74 AT5G64380 552 / 0.0 Inositol monophosphatase family protein (.1) Potri.008G063800 [exp] 97 / 2e-22 AT3G55800 629 / 0.0 sedoheptulose-bisphosphatase (.1) Potri.010G193300 [exp] 97 / 3e-22 AT3G55800 625 / 0.0 sedoheptulose-bisphosphatase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0171 [flax] [poplar] Phospoesterase PF00316 [flax] [poplar] FBPase Fructose-1-6-bisphosphatase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10028580 pacid=23164478 polypeptide=Lus10028580 locus=Lus10028580.g ID=Lus10028580.BGIv1.0 annot-version=v1.0 ATGGATCACGCGGCGGATGCGATGAGGACCGACTTGATGACGATAACTCGGTACGTGCTGAACGAGCAGACGAAGCACCCCGAGTCACGCGGCGACTTCA CCATCCTCCTCAGTCACATTGTCCTCGGCTGCAAGTTCGTCTGCTCCTCCGTTAACAAGGCTGGTCTGGCAAAATTGATTGGGCTTGCTGGGGAGACCAA TGTTCAAGGTGAAGAGCAGAAGAAACTGGATGTGCTCTCTAATGAAGTCTTCATCAAAGCCTTAGTAAGCAGCGGCCGAACCTGCATTCTTGTGTCTGAG GAAGATGAAGAAGCAACCTTTGTGGAACCAGCCTTGCGTGGCAAGTACTGTGTCGTTTTCGATCCGTTGGATGGATCCTCCAACATCGACTGTGGTGTCT CCATCGGAACGATATTTGGGATTTACATGATCAAAGATGGCTCTGAGCCAACTGTGGAGGATGCATTGCAGCCGGGGAAGAACATGGTTGCAGCCGGTTA CTGCATGTATGGAAGCTCGTGCACGTTAGTGCTGAGCACGGGTGGAGGAGTCAACGGGTTCACTCTTGATCCGTCTCTTGGGGAGTTCATACTCACTCAC CCTGATATCAAGATTCCGAAGAAGGGCAAGATCTATTCGGTCAACGAAGGGAATGCCAAGAACTGGGATGGTCCAACGGCCAAGTATGTGGAGAGCTGCA AGTACCCTAAAGATGGTTCCTCTCCAAAGTCTCTTAGATACATTGGAAGTATGGTTGCTGATGTGCACCGGACATTGCTGTATGGAGGCATATTCTTGTA CCCAGCTGACAAGAAGAGTCCCAGCGGAAAACTTCGTGTGTTGTACGAAGTCTTCCCAATGTCGTTCCTGATGGAGCAAGCTGGAGGCCAAGCTTTCACC GGCAAGGAAAGGGCACTGGACTTGGTCCCGACGAAGATACACGAGCGATCTCCCATATTCTTGGGAAGTTCGGATGACGTGGAGGAAATCAAAGCCCTCT ATGCTGCTGAGGCAAAGAACTAA
AA sequence Show only first row Show all	>Lus10028580 pacid=23164478 polypeptide=Lus10028580 locus=Lus10028580.g ID=Lus10028580.BGIv1.0 annot-version=v1.0 MDHAADAMRTDLMTITRYVLNEQTKHPESRGDFTILLSHIVLGCKFVCSSVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALVSSGRTCILVSE EDEEATFVEPALRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMIKDGSEPTVEDALQPGKNMVAAGYCMYGSSCTLVLSTGGGVNGFTLDPSLGEFILTH PDIKIPKKGKIYSVNEGNAKNWDGPTAKYVESCKYPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPSGKLRVLYEVFPMSFLMEQAGGQAFT GKERALDLVPTKIHERSPIFLGSSDDVEEIKALYAAEAKN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G43670		FINS1, AtcFBP	FRUCTOSE INSENSITIVE 1, Arabid...		Lus10028580 [exp]	0	1
AT2G13360		SGAT, AGT1, AGT	L-serine:glyoxylate aminotrans...		Lus10009710 [exp]	1.4	0.8765
AT3G27820		ATMDAR4	monodehydroascorbate reductase...		Lus10022260 [exp]	2.4	0.8586
AT5G58140		NPL1, PHOT2	NON PHOTOTROPIC HYPOCOTYL 1-LI...		Lus10026572 [exp]	4.0	0.8399
AT3G56010			unknown protein		Lus10040939 [exp]	6.2	0.8482
AT3G27110			Peptidase family M48 family pr...		Lus10032044 [exp]	7.7	0.8370
AT1G75020		LPAT4	lysophosphatidyl acyltransfera...		Lus10018803 [exp]	8.8	0.7771
AT2G01110		TATC, PGA2, APG...	unfertilized embryo sac 3, TWI...		Lus10007945 [exp]	11.8	0.7770
AT2G48020			Major facilitator superfamily ...		Lus10027976 [exp]	12.0	0.7802
AT3G04870		SPC1, PDE181, Z...	SPONTANEOUS CELL DEATH 1, PIGM...		Lus10009190 [exp]	16.1	0.7447
AT1G67280			Glyoxalase/Bleomycin resistanc...		Lus10043235 [exp]	18.8	0.8065

Compare expression of checked genes

Lus10028580 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.