Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24020 72 / 8e-16 MLP423 MLP-like protein 423 (.1.2) AT1G70880 39 / 0.0008 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010700 [exp] 317 / 3e-111 AT1G24020 74 / 4e-17 MLP-like protein 423 (.1.2) Lus10010701 [exp] 233 / 2e-78 AT1G24020 80 / 3e-19 MLP-like protein 423 (.1.2) Lus10029185 [exp] 229 / 7e-77 AT1G24020 80 / 2e-19 MLP-like protein 423 (.1.2) Lus10001042 [exp] 103 / 2e-27 AT1G24020 69 / 5e-15 MLP-like protein 423 (.1.2) Lus10003451 [exp] 99 / 6e-26 AT1G24020 73 / 7e-17 MLP-like protein 423 (.1.2) Lus10001041 [exp] 97 / 4e-25 AT1G24020 64 / 2e-13 MLP-like protein 423 (.1.2) Lus10000474 [exp] 96 / 8e-25 AT1G24020 64 / 2e-13 MLP-like protein 423 (.1.2) Lus10010698 [exp] 97 / 4e-23 AT1G24020 94 / 2e-22 MLP-like protein 423 (.1.2) Lus10001032 [exp] 89 / 6e-22 AT1G24020 44 / 1e-05 MLP-like protein 423 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G096000 [exp] 79 / 2e-18 AT1G24020 188 / 3e-62 MLP-like protein 423 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF00407 [flax] [poplar] Bet_v_1 Pathogenesis-related protein Bet v 1 family
Representative CDS sequence Show only first row Show all	>Lus10029183 pacid=23151823 polypeptide=Lus10029183 locus=Lus10029183.g ID=Lus10029183.BGIv1.0 annot-version=v1.0 ATGTCGAGCCCTTCCTCCAACCTCGATGTTGCTCATGCTAACCTAACCGGCGGCAAACTACCTCAAGGGCCGCGAGGAGCTACAAACACTACTGTTTCGA GGAAAATTCTAACGCAGGAAGCTACACCTGTGGTGGAGCAATTAGCTGTTGCCCGTGGCCAAATCTCCGAAGAAAGGATGTCGTCAGGATCAGCAGCAGG CCGCATTACGTTGGCCGACCACAAAATGACATCATCGGCCAACGATGTTTGGGGGGTCATCTTTGCATCCACTTCGGTCTTCCCACAAGTTCTCCCAAAA CTCTACAAAGAGATCAAAACCACCAAGCCCGACGGCTACTCTCCAAATTCCATGCGCGAGATCAATTATGGCTATGCCGCAGGGTTTGGAGATACAGTGA ACTCGTCGATCGAGGAGATAAAAAAGGTGGACCACGGGAAGAGGACGGTGATTTATGAGGTTACAAGTGGGGACATCCTAAACCATCATGACACTTTTGA CACCAGTATAACAGTAACTCCCTTGGACGGTGTTAGCCCGAGGAAGCCTGGGTGCAAGGTTTCGTGGACTTGTGACTATACCGGTGCAACGGGTGCTTTG AGCACGAATGTAGTCAAGGAGTTTTGGATCAACACCTTGGATGGCTTGGACAGCTATCTCCAGAAGCTAGCTAAAAATAGTCAATAA
AA sequence Show only first row Show all	>Lus10029183 pacid=23151823 polypeptide=Lus10029183 locus=Lus10029183.g ID=Lus10029183.BGIv1.0 annot-version=v1.0 MSSPSSNLDVAHANLTGGKLPQGPRGATNTTVSRKILTQEATPVVEQLAVARGQISEERMSSGSAAGRITLADHKMTSSANDVWGVIFASTSVFPQVLPK LYKEIKTTKPDGYSPNSMREINYGYAAGFGDTVNSSIEEIKKVDHGKRTVIYEVTSGDILNHHDTFDTSITVTPLDGVSPRKPGCKVSWTCDYTGATGAL STNVVKEFWINTLDGLDSYLQKLAKNSQ

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10029183 [exp]	0	1
AT5G46060			Protein of unknown function, D...		Lus10013944 [exp]	18.4	0.8023
AT4G02340			alpha/beta-Hydrolases superfam...		Lus10006827 [exp]	29.4	0.7977
AT5G47450		ATTIP2;3, DELTA...	DELTA-TONOPLAST INTRINSIC PROT...		Lus10004733 [exp]	36.7	0.7875
AT5G52450			MATE efflux family protein (.1...		Lus10019492 [exp]	41.3	0.7326
AT1G07290		GONST2	golgi nucleotide sugar transpo...		Lus10005865 [exp]	44.1	0.7672
AT3G62940			Cysteine proteinases superfami...		Lus10005939 [exp]	63.2	0.7506
AT5G20260			Exostosin family protein (.1)		Lus10005186 [exp]	68.2	0.7533
AT2G35730			Heavy metal transport/detoxifi...		Lus10000263 [exp]	78.9	0.7003
AT3G26590			MATE efflux family protein (.1...		Lus10006206 [exp]	79.3	0.7153
AT1G23280			MAK16 protein-related (.1)		Lus10019648 [exp]	83.9	0.7372

Compare expression of checked genes

Lus10029183 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.