Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24020 83 / 3e-18 MLP423 MLP-like protein 423 (.1.2) AT1G23120 46 / 2e-05 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1) AT1G70840 43 / 0.0003 MLP31 MLP-like protein 31 (.1) AT5G28000 43 / 0.0003 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1) AT1G70850 44 / 0.0005 MLP34 MLP-like protein 34 (.1.2.3)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010702 [exp] 589 / 0 AT1G24020 79 / 4e-17 MLP-like protein 423 (.1.2) Lus10029184 [exp] 443 / 4e-144 AT1G24020 84 / 1e-18 MLP-like protein 423 (.1.2) Lus10029182 [exp] 227 / 2e-65 AT1G24020 88 / 1e-20 MLP-like protein 423 (.1.2) Lus10010698 [exp] 214 / 2e-60 AT1G24020 94 / 2e-22 MLP-like protein 423 (.1.2) Lus10010699 [exp] 110 / 2e-28 AT1G24020 56 / 7e-11 MLP-like protein 423 (.1.2) Lus10029185 [exp] 92 / 5e-21 AT1G24020 80 / 2e-19 MLP-like protein 423 (.1.2) Lus10010701 [exp] 90 / 2e-20 AT1G24020 80 / 3e-19 MLP-like protein 423 (.1.2) Lus10010700 [exp] 89 / 5e-20 AT1G24020 74 / 4e-17 MLP-like protein 423 (.1.2) Lus10025503 [exp] 91 / 1e-18 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G096000 [exp] 80 / 3e-17 AT1G24020 188 / 3e-62 MLP-like protein 423 (.1.2) Potri.004G032900 [exp] 56 / 1e-08 AT1G24020 59 / 2e-11 MLP-like protein 423 (.1.2) Potri.004G033000 [exp] 55 / 2e-08 AT1G24020 57 / 1e-10 MLP-like protein 423 (.1.2) Potri.010G000400 [exp] 52 / 3e-07 AT1G24020 66 / 4e-14 MLP-like protein 423 (.1.2) Potri.010G000200 [exp] 47 / 8e-06 AT1G24020 65 / 1e-13 MLP-like protein 423 (.1.2) Potri.008G212100 [exp] 45 / 7e-05 AT1G24020 50 / 6e-08 MLP-like protein 423 (.1.2) Potri.008G213223 [exp] 41 / 0.0006 AT1G24020 64 / 6e-14 MLP-like protein 423 (.1.2) Potri.004G020000 [exp] 41 / 0.0008 AT1G70880 69 / 3e-15 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF00407 [flax] [poplar] Bet_v_1 Pathogenesis-related protein Bet v 1 family CL0066 [flax] [poplar] Trefoil PF07468 [flax] [poplar] Agglutinin Agglutinin domain
Representative CDS sequence Show only first row Show all	>Lus10029186 pacid=23151719 polypeptide=Lus10029186 locus=Lus10029186.g ID=Lus10029186.BGIv1.0 annot-version=v1.0 ATGAGATGGCCAAAGTACGTGGTGTTGAAGTCCATGTACAACAACAAGTACCTGAGCTACCGAGACGAACAAGGTGAGGACCAGCACGGGTTCCTCCAGT TCTCTGAAGACGATCCCACCAGCCGTTACTCGAAATTCGAGGTCAAGAGGTCGACCGCCGAGGATGGATCCGTCCACCTCAAGTGCAGCTTCAGCAAGAA GTACTTGGCAAGGGAATCTTCCACTAGCTGGTGGATCAGCGCGTCTTCGCGTGGCAAAGCCCAAGAGGACCGATCCGAATGGTCATGCACTCTGTTCAAA CCGATCGTCGTTAATGGTGATCATTACAAACATGATGACAATGATGATGAGAAGTTAACCGTGGTTCGGTTCTTCCACGTCCAGCTCAACCACTTCGCTT GCCTGTTCAGGAGTGGCCCTCCTTATGGCGAATGTCTCTACGCAGGGTGGGAATCTCCTAACCAAGACCTGTGCGATGCTGTTTCGGTTATCGATTGGGA ATCTGTGACCCAAACCAGGATTCCAAAACGGGTTAACATGTCGAATACGAAACAGGTGATGCCCAAGTTTGCGGTGATCAAGTCGAGGTACAATCACAAG TACCTCCGTTACAGAAATGAAAAAGGGGAGCAACATGGGTTCCTCCAGTTCTCGTTAGAAGGCGATAAGGCGGACGCGGTAGCAAACCGGTATGCAAAAT TCGAACTGAAGAAGGCGAGTTTTGGGGATGGATTGGTGCATCTGAAATGCTGCACCAATAACAAGTACTTGATGAGGTCCGATGCTACCAAGTGGTGGAT TCGTGCCGGGGCTGATGCAGTCGTGGAAGACGAGTCTAAATGGTCGTGTACCCTTTTCAAGCCTGTGTATGTGAATTATGATGGTGGCATTCGATTTTGG CATGTTCAGCTTCGACATTTCGTCAGTTTGTTTAGAAGTGGTCCACCTTTCGGGGAATGCTTATATGCCGGATGGAAGGATCCTAATCAGGATTTATGTG ATGTGTTTACAGTCATTGATTGGGAAAAGGAACAAGATGATGATGATGATGATGATAATGAAGGAGATCCATCTATCTCGGAGGAAGAAGAAGAACCGGT TAAGATCCCGCCTAGAAGGCGTCCTGGCGATCGTTTCGGCAGTCTTTCGCCGGAAAGGCGTGGAGATCGAAACAAGGCCGATAAACAAATGAGTGATAAT GAGTACTACATTCATCCTCGAGGTCAACCGGCTCGTCCGGCTGGTGATCGTCGCAGGAGTCATTCGCCGACAAGGCATCAAGCTGGCAGGAAGATCAACC GTGATGATGAATACGAGATTCCTCCACGACATACTCGATGGCCTGATGACCGTCGCAGTAGTCGTTCGCCTAGAAGGAATCAAGCTGGCAGGAAGGTCAA CCGTGATGATGAATATGAGATTCCTCCAAGACATACTGAACGACCTGATGATCGTCGCAGTAGCCATTCACCGAGAAGGAATCAAGCTGGTAGGAAGAAC AACCATGATGATGAATACGATATTCCTCCACGAAATCCTTCCGCTCGATCGGATGGGGATCGTCGCAGTAATCGTTCACCGAGAAGGAATCAAGCTGGCG GGAAGATGAACCGTGATGATGAATACGATATTCCTCCACAAAATCCTCCCGCTCGATCGGATGGGGATCGTCGCAGTAGTTATTCACCGAGAAGGAATCA AGCTGGCGGGAAGATGAACCGTGATGATGAATACGATATTCCTCCACAAAATCCTCCCGCTCGATCGGATGGGGATCGTCGCAGTAATCGTTCACCGAGA AGGAATCAAGCTGGCGGGAAGATGAACCGTGATGATGAATACGATATTCCTCCACAAAATCCTCCCGCTCGATCGGATGGGGATCGTCGCAGTAATCGTT CACCGAGAAGGAATCAAGCTGGCGGGAAGATGAACCGTGATGATGAATACGATATTCCTCCACAAAATCCTCCCGCTCGATCGGATGGGGATCGTCGCAG TAATCGTTCACCGAGAAGGAATCAAGCTGGCGGGAAGATGAACCGTGATGATGAATACGATATTCCTCCACAAAATCCTCCCGCTCGATCGGATGGGGAT CGTCGCAGTAGTTATTCACCGAAAAGGCATCAACCTGGCGGGAGGATCAACCGTGATGATGAATACAACATTCCTCCTCCACGACATACTCGACCAGCTG GTGATCGTCGCAGTAGTCATTCGCCGAAAAGGCATGACTACGGAAAAAGGAACAATCGTGATGATGAAGACTTCGCTCCTCCACGACATGGCCAGCGGCC TGATGACCGTCCCAGTAGCTCACATGACGATGGAAAGAAGATCAATAGTGACAGTGAAGCTTACAATCGAGGCAAACATGGAGAGCAGACAGATCGTAAG AATGAAAACTACACTCCTCCTCAGCAGACTGGTGGGTGTGCTAGCAGTCTTTCGCAAAGGCGTGGAGATCGAAACAGAACCAATCAGACCAATAGTGATA ACGAAAACTACACTCATGGAGGGCATCAATCGGCACCGGATGCCAAGGGTAAAGGCAGCGTACCCCACCAGTACGAAATCCCCAAGCAAGAAGCTGAAAA GGAAGAAAGTGACCAAGTGGAATTCAATGTCATCTCAACAGCAGATACGTTCTGGGGAGCAGTCTTTGTGTCCACAAAGCTACTGCCGAAAGCATTGCCA CAAGTGTACAAAGCTATCAAAGTGATTAGCCCGGATGGGTTCAGCGAAGGCTCAATCCGCGAGATTAGCTTCACTCAAGATGCAGGTGAGTTTGAGAAGT TGAAGGAGAAGGTAGTGTACGTGGATCACCAGACGAAGAAGATAACATGGTCCCTTCTGGAAGGAGGAATGCTGGACTACTATGAGAGGTTCAAGATCAC TATATCAGTCACTCCAAAGAAACGTCGCGACAGGGGATGCAGAGTGAATTGGAGCTACGTTGGTATCAATCCAAAGAAGAAGTTTGATAAGGACGGCTTT AAGAAGTTGTTTCAGGATACCTTCGAAGCTGTAGATGATTATCTCGAGAGCAATGCTGCTAAAGATACCAATTAG
AA sequence Show only first row Show all	>Lus10029186 pacid=23151719 polypeptide=Lus10029186 locus=Lus10029186.g ID=Lus10029186.BGIv1.0 annot-version=v1.0 MRWPKYVVLKSMYNNKYLSYRDEQGEDQHGFLQFSEDDPTSRYSKFEVKRSTAEDGSVHLKCSFSKKYLARESSTSWWISASSRGKAQEDRSEWSCTLFK PIVVNGDHYKHDDNDDEKLTVVRFFHVQLNHFACLFRSGPPYGECLYAGWESPNQDLCDAVSVIDWESVTQTRIPKRVNMSNTKQVMPKFAVIKSRYNHK YLRYRNEKGEQHGFLQFSLEGDKADAVANRYAKFELKKASFGDGLVHLKCCTNNKYLMRSDATKWWIRAGADAVVEDESKWSCTLFKPVYVNYDGGIRFW HVQLRHFVSLFRSGPPFGECLYAGWKDPNQDLCDVFTVIDWEKEQDDDDDDDNEGDPSISEEEEEPVKIPPRRRPGDRFGSLSPERRGDRNKADKQMSDN EYYIHPRGQPARPAGDRRRSHSPTRHQAGRKINRDDEYEIPPRHTRWPDDRRSSRSPRRNQAGRKVNRDDEYEIPPRHTERPDDRRSSHSPRRNQAGRKN NHDDEYDIPPRNPSARSDGDRRSNRSPRRNQAGGKMNRDDEYDIPPQNPPARSDGDRRSSYSPRRNQAGGKMNRDDEYDIPPQNPPARSDGDRRSNRSPR RNQAGGKMNRDDEYDIPPQNPPARSDGDRRSNRSPRRNQAGGKMNRDDEYDIPPQNPPARSDGDRRSNRSPRRNQAGGKMNRDDEYDIPPQNPPARSDGD RRSSYSPKRHQPGGRINRDDEYNIPPPRHTRPAGDRRSSHSPKRHDYGKRNNRDDEDFAPPRHGQRPDDRPSSSHDDGKKINSDSEAYNRGKHGEQTDRK NENYTPPQQTGGCASSLSQRRGDRNRTNQTNSDNENYTHGGHQSAPDAKGKGSVPHQYEIPKQEAEKEESDQVEFNVISTADTFWGAVFVSTKLLPKALP QVYKAIKVISPDGFSEGSIREISFTQDAGEFEKLKEKVVYVDHQTKKITWSLLEGGMLDYYERFKITISVTPKKRRDRGCRVNWSYVGINPKKKFDKDGF KKLFQDTFEAVDDYLESNAAKDTN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10029186 [exp]	0	1
AT3G47570			Leucine-rich repeat protein ki...		Lus10030846 [exp]	1.0	0.8435
AT3G47570			Leucine-rich repeat protein ki...		Lus10006445 [exp]	1.4	0.8398
AT5G38940			RmlC-like cupins superfamily p...		Lus10038441 [exp]	11.0	0.6816
AT3G47570			Leucine-rich repeat protein ki...		Lus10011386 [exp]	12.3	0.8013
AT4G00440			Protein of unknown function (D...		Lus10036356 [exp]	16.4	0.7467
AT4G05200		CRK25	cysteine-rich RLK (RECEPTOR-li...		Lus10003660 [exp]	17.6	0.7458
AT2G23770			protein kinase family protein ...		Lus10022488 [exp]	17.7	0.7545
AT4G33920			Protein phosphatase 2C family ...		Lus10011521 [exp]	19.0	0.7892
AT3G47570			Leucine-rich repeat protein ki...		Lus10032306 [exp]	19.2	0.8101
AT4G26640	WRKY	ATWRKY20, WRKY2...	WRKY family transcription fact...		Lus10043167 [exp]	21.6	0.8171

Compare expression of checked genes

Lus10029186 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.