Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05680 189 / 1e-58 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G43840 187 / 1e-57 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G24100 183 / 2e-56 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT1G05675 183 / 3e-56 UDP-Glycosyltransferase superfamily protein (.1) AT2G43820 180 / 4e-55 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G31790 180 / 5e-55 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 173 / 2e-52 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G05560 149 / 3e-43 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT3G21560 144 / 5e-41 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1) AT1G05530 142 / 2e-40 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010712 [exp] 276 / 2e-92 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10008742 [exp] 201 / 8e-63 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006351 [exp] 173 / 5e-54 AT1G05680 315 / 9e-106 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10024486 [exp] 176 / 2e-53 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006353 [exp] 174 / 1e-52 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10014148 [exp] 174 / 1e-52 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006721 [exp] 169 / 1e-50 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10024117 [exp] 169 / 2e-50 AT1G05675 385 / 4e-130 UDP-Glycosyltransferase superfamily protein (.1) Lus10006352 [exp] 167 / 5e-50 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G032500 [exp] 203 / 9e-64 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032300 [exp] 199 / 3e-62 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032700 [exp] 194 / 1e-60 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 194 / 1e-60 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 194 / 2e-60 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 191 / 4e-59 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 189 / 1e-58 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.014G175000 [exp] 186 / 2e-57 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G140500 [exp] 180 / 5e-55 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G117200 [exp] 178 / 2e-54 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10029197 pacid=23151726 polypeptide=Lus10029197 locus=Lus10029197.g ID=Lus10029197.BGIv1.0 annot-version=v1.0 ATGGAAGCCACTCAACGACGAGTGCACGAAGTGGCTGGTGTGAAATCAGTAGCATTCATCTCATTTGGGAGCATGGTTTCCCTGACGGAAGAACAGACTG CAGAATTCGCAGGAGGGTTGGAGGAATCCGATGTGGAGTTCTTGTGGGTGGTGCGAGAATCAGAGCTAAGCAAGCTCCCCAAATGGTTTAGGGAGTCGTT AAGTTCTTCGAGTTCGAAGGGTCTAATAGTGCCGTGGTGTAACCAGCTCGAAATGGTGGGACACAGGGCCACTGGATGCTTTGTGACACACTGCGGCTGG AACTCGACGCTCGAAGGGCTGAGCCTCGGCGTGCCCATGGTGGCTATGCCGCAGTGGACCGATCAGGTCACCAACGCCAAGTACATCGAGGATGTGTCGA GGGTTGGTGTTAGAGTGAAGGAAGATGAGAGTGGGGTTGCTCGAAGAGAGGAGATAGCGAAGTGCTTGAAGGAAGTGATGTCGGAAGGTGATCGGAGCAA GGAGATTAAGGAAGCTGCGAGGAAATGGAGGTGA
AA sequence Show only first row Show all	>Lus10029197 pacid=23151726 polypeptide=Lus10029197 locus=Lus10029197.g ID=Lus10029197.BGIv1.0 annot-version=v1.0 MEATQRRVHEVAGVKSVAFISFGSMVSLTEEQTAEFAGGLEESDVEFLWVVRESELSKLPKWFRESLSSSSSKGLIVPWCNQLEMVGHRATGCFVTHCGW NSTLEGLSLGVPMVAMPQWTDQVTNAKYIEDVSRVGVRVKEDESGVARREEIAKCLKEVMSEGDRSKEIKEAARKWR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10029197 [exp]	0	1
AT1G60790		TBL2	TRICHOME BIREFRINGENCE-LIKE 2,...		Lus10030590 [exp]	9.7	0.8761
AT1G22340		ATUGT85A7	UDP-glucosyl transferase 85A7 ...		Lus10035921 [exp]	13.4	0.8404
AT5G63180			Pectin lyase-like superfamily ...		Lus10014887 [exp]	21.5	0.8111
					Lus10018670 [exp]	23.4	0.8400
AT1G68290		ENDO2 ,ENDO 2	endonuclease 2 (.1)		Lus10034336 [exp]	40.8	0.8214
AT4G37850	bHLH	bHLH025	basic helix-loop-helix (bHLH) ...		Lus10039640 [exp]	44.6	0.8109
AT4G09890			Protein of unknown function (D...		Lus10033529 [exp]	46.1	0.8019
AT5G01300			PEBP (phosphatidylethanolamine...		Lus10003388 [exp]	61.2	0.7509
AT2G20820			unknown protein		Lus10037883 [exp]	68.2	0.7940
AT4G21340	bHLH	bHLH103, B70	basic helix-loop-helix (bHLH) ...		Lus10005959 [exp]	70.1	0.7932

Compare expression of checked genes

Lus10029197 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.