Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G73260 73 / 7e-16 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G17860 71 / 5e-15 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73325 64 / 2e-12 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 50 / 1e-07 ATDR4 drought-repressed 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004223 [exp] 388 / 2e-139 AT1G73260 81 / 1e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Lus10039209 [exp] 90 / 4e-22 AT1G17860 179 / 6e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039163 [exp] 89 / 2e-21 AT1G17860 167 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007889 [exp] 87 / 6e-21 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013770 [exp] 87 / 7e-21 AT1G17860 166 / 6e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039210 [exp] 86 / 2e-20 AT1G17860 179 / 4e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10011090 [exp] 85 / 2e-20 AT1G17860 161 / 4e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030354 [exp] 85 / 5e-20 AT1G17860 160 / 1e-49 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039208 [exp] 83 / 1e-19 AT1G17860 172 / 2e-54 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G000400 [exp] 211 / 1e-69 AT1G73260 91 / 9e-23 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.001G309900 [exp] 191 / 6e-62 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.007G111600 [exp] 187 / 3e-60 AT1G73260 70 / 8e-15 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.019G006900 [exp] 179 / 2e-57 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.007G111500 [exp] 175 / 1e-55 AT1G73260 79 / 5e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.007G111800 [exp] 170 / 2e-53 AT1G73260 79 / 3e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.007G111700 [exp] 169 / 5e-53 AT1G73260 70 / 1e-14 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.004G067900 [exp] 93 / 3e-23 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 88 / 2e-21 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153400 [exp] 84 / 6e-20 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10029429 pacid=23139916 polypeptide=Lus10029429 locus=Lus10029429.g ID=Lus10029429.BGIv1.0 annot-version=v1.0 ATGGCTTCTTCCAGTACAATCATTCTCCAGACTATGATGATATGGCTACTCATATCCATATCCGCAACGGCGCAATCCACCTCCCCGCCGATCCTCGACA CAGCCGGGCAGCCAGTGAGGCGTGGGGTGGACTACTACATCCTCCCCGCAATAACTGACGTTGCGGGAGGGCTAACTCTGGTGCCCCGCAACGCCACGAG CAACTGCCCCCTCTACGTGGGACAGGTGCCCCTGGCCCAGGTCGTGTCCCAGGGGCTCCCTGCAACGTTCGCCCCGTTTACGAACGGGGAGAATATTGTG AGGGAGTCTAGGGACTTGACCGTTACATTCTCGGCTGCCACGACCTGCCAACAGGGGACGTCGTGGGTGATTGCGGAGGAGGATGCTCAGAGTCGGAGGA GGCTTCTCAGGGCCGGTGGTGGGACGACCCCAAGTTACTTCAGGATTGATAGGAACACGACGACGAATGCGTACCAGTTCGTGTGGTGTCCCGGGGAGTC GTGCACTGCCCCGAACTGCGGGAGGCCGAGGTGTGGAGCTGCTGGGATCTTGGTTCGTGGTCGGACTAGGTTCTTGGCTCTGGATGGCCCTGCTTTCCCT TTCCGATTCATGAGGGCTTAG
AA sequence Show only first row Show all	>Lus10029429 pacid=23139916 polypeptide=Lus10029429 locus=Lus10029429.g ID=Lus10029429.BGIv1.0 annot-version=v1.0 MASSSTIILQTMMIWLLISISATAQSTSPPILDTAGQPVRRGVDYYILPAITDVAGGLTLVPRNATSNCPLYVGQVPLAQVVSQGLPATFAPFTNGENIV RESRDLTVTFSAATTCQQGTSWVIAEEDAQSRRRLLRAGGGTTPSYFRIDRNTTTNAYQFVWCPGESCTAPNCGRPRCGAAGILVRGRTRFLALDGPAFP FRFMRA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G73260		ATKTI1	ARABIDOPSIS THALIANA KUNITZ TR...		Lus10029429 [exp]	0	1
AT5G06720		ATPA2	peroxidase 2 (.1)		Lus10008167 [exp]	1.7	0.9252
AT2G38870			Serine protease inhibitor, pot...		Lus10024870 [exp]	2.0	0.9289
AT4G15440		CYP74B2, HPL1	hydroperoxide lyase 1 (.1)		Lus10030033 [exp]	5.2	0.9396
AT4G15440		CYP74B2, HPL1	hydroperoxide lyase 1 (.1)		Lus10035289 [exp]	6.3	0.9164
AT2G31945			unknown protein		Lus10039201 [exp]	10.6	0.9191
AT2G38870			Serine protease inhibitor, pot...		Lus10018784 [exp]	12.9	0.8765
AT3G45140		ATLOX2, LOX2	ARABIODOPSIS THALIANA LIPOXYGE...		Lus10031237 [exp]	14.6	0.8866
AT3G19615			unknown protein		Lus10042265 [exp]	14.7	0.9212
AT3G45140		ATLOX2, LOX2	ARABIODOPSIS THALIANA LIPOXYGE...		Lus10031810 [exp]	20.6	0.9175
					Lus10029807 [exp]	26.0	0.8610

Compare expression of checked genes

Lus10029429 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.