Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05675 137 / 4e-37 UDP-Glycosyltransferase superfamily protein (.1) AT2G43820 126 / 3e-33 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G43840 120 / 4e-31 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G31750 119 / 8e-31 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT1G05680 112 / 3e-28 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G24100 108 / 1e-26 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT2G31790 100 / 8e-24 UDP-Glycosyltransferase superfamily protein (.1) AT4G15480 75 / 6e-15 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT3G21560 73 / 2e-14 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1) AT1G78270 70 / 2e-13 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024117 [exp] 325 / 3e-109 AT1G05675 385 / 4e-130 UDP-Glycosyltransferase superfamily protein (.1) Lus10024118 [exp] 201 / 3e-61 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1) Lus10006721 [exp] 174 / 5e-51 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 173 / 1e-50 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10029466 [exp] 164 / 2e-50 AT1G05675 186 / 5e-57 UDP-Glycosyltransferase superfamily protein (.1) Lus10017825 [exp] 152 / 8e-43 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10039041 [exp] 148 / 3e-41 AT1G05675 343 / 3e-114 UDP-Glycosyltransferase superfamily protein (.1) Lus10006353 [exp] 146 / 1e-40 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006352 [exp] 145 / 4e-40 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G140300 [exp] 179 / 6e-53 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140700 [exp] 172 / 7e-51 AT1G05680 357 / 2e-120 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.014G175000 [exp] 159 / 2e-45 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.015G071900 [exp] 149 / 8e-42 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.004G179300 [exp] 149 / 1e-41 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032300 [exp] 147 / 6e-41 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G389200 [exp] 144 / 8e-40 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 143 / 2e-39 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 143 / 2e-39 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 143 / 2e-39 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10029469 pacid=23149450 polypeptide=Lus10029469 locus=Lus10029469.g ID=Lus10029469.BGIv1.0 annot-version=v1.0 ATGAGGGAGGCAGGATCCCCTGTCGCGTGCCTCATCTACGACTCGGCGGTCCCGACGACTCTTACTAATGCCAAGGAGATGAATATACTGGCGGCTGCTT TCTTCACCATGCCTTGCGCCGTCGACATCATTTTCTATAACCACCATCAGGGGAAGATCAAGCCACGTCGTCCGGTGGATGATAATGATAAGAAGGCCAA GATTCGTTTGGAAGGAATGGAGAAAGTGGAGCTTGAAATCCAGGACTTGCCTTCTTTTCTACAAGATGACGTGGACTTCAAGACAGCGCCGTCGCTGAAC CAAATAGTAGAGTGGATGGCAAGCAAGTTCAATCTCAAGACGGTGGGACCTACCATCCCATCAATCTACTTGGGCAAGCAACCGCATGACGACCATCACG AGTATGGTCTCAGCCTCTTCCAACCTCAATCCCAAACATGCCTCCTCGATTGGCTCGACTCCCAACTCCCCCAATCCGTCGTCTACGTGTCGTTCGACAC CATCACCACGCTGTTCGACATACGGACATCGGAAGTAGCCGCCGCACTTGAGAACACCCACCGCTCTTTCCTCTGGGTCGTCAGGAAATCCGAACAGGAC AAACTCCCACCCGGTTTCCCCACATCCGACAAATCAGGGATGGGGGTGAGAGTGAATAAATCAGAAGAAGGGATAGTGAGGAAGGAAGAGATAGAGAAAA GGATAACGGAAGTGATGGAAGGGGAGAAGGCAGAGAGTATTAGAAGAAACGTTGAGAAATGGAAGAGTCTTGCTCAAGGCGCCGTTGCGCCAGGAGGAAC TTCCGACAATAATATTCGAGAGTTTGTGGCTCAACTCACCAATTCCCAACGACTCAAGGATTGA
AA sequence Show only first row Show all	>Lus10029469 pacid=23149450 polypeptide=Lus10029469 locus=Lus10029469.g ID=Lus10029469.BGIv1.0 annot-version=v1.0 MREAGSPVACLIYDSAVPTTLTNAKEMNILAAAFFTMPCAVDIIFYNHHQGKIKPRRPVDDNDKKAKIRLEGMEKVELEIQDLPSFLQDDVDFKTAPSLN QIVEWMASKFNLKTVGPTIPSIYLGKQPHDDHHEYGLSLFQPQSQTCLLDWLDSQLPQSVVYVSFDTITTLFDIRTSEVAAALENTHRSFLWVVRKSEQD KLPPGFPTSDKSGMGVRVNKSEEGIVRKEEIEKRITEVMEGEKAESIRRNVEKWKSLAQGAVAPGGTSDNNIREFVAQLTNSQRLKD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10029469 [exp]	0	1
AT1G11190		ENDO1, BFN1	ENDONUCLEASE 1, bifunctional n...		Lus10011232 [exp]	1.4	0.9087
AT1G11910		ATAPA1, APA1	aspartic proteinase A1 (.1)		Lus10020024 [exp]	3.7	0.9174
AT3G02430			Protein of unknown function (D...		Lus10036581 [exp]	5.7	0.8976
AT2G01300			unknown protein		Lus10004062 [exp]	8.7	0.8977
AT3G14250			RING/U-box superfamily protein...		Lus10024093 [exp]	14.1	0.8754
AT1G53210			sodium/calcium exchanger famil...		Lus10033629 [exp]	14.7	0.8728
AT1G70670		AtCLO4	Arabidopsis thaliana caleosin ...		Lus10014588 [exp]	21.8	0.8788
AT2G18170		ATMPK7	MAP kinase 7 (.1)		Lus10025986 [exp]	24.1	0.8066
AT4G24460		CLT2	CRT (chloroquine-resistance tr...		Lus10028858 [exp]	26.4	0.8836
AT2G01300			unknown protein		Lus10002277 [exp]	26.7	0.8241

Compare expression of checked genes

Lus10029469 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.