Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G69930 96 / 3e-25 ATGSTU11 glutathione S-transferase TAU 11 (.1) AT1G27130 92 / 3e-24 GST12, ATGSTU13 GLUTATHIONE S-TRANSFERASE 12, glutathione S-transferase tau 13 (.1) AT1G10370 92 / 5e-24 GST30B, ATGSTU17, ERD9 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) AT1G59700 90 / 4e-23 ATGSTU16 glutathione S-transferase TAU 16 (.1) AT1G69920 86 / 2e-21 ATGSTU12 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, glutathione S-transferase TAU 12 (.1) AT1G59670 85 / 3e-21 ATGSTU15 glutathione S-transferase TAU 15 (.1) AT1G10360 84 / 4e-21 GST29, ATGSTU18 GLUTATHIONE S-TRANSFERASE 29, glutathione S-transferase TAU 18 (.1) AT1G27140 81 / 2e-19 GST13, ATGSTU14 GLUTATHIONE S-TRANSFERASE 13, glutathione S-transferase tau 14 (.1) AT2G29450 61 / 4e-12 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT3G09270 60 / 6e-12 ATGSTU8 glutathione S-transferase TAU 8 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036688 [exp] 196 / 1e-64 AT1G10370 281 / 1e-96 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10037234 [exp] 187 / 2e-61 AT1G10370 285 / 2e-98 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10009746 [exp] 170 / 3e-56 AT1G10370 96 / 1e-25 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030805 [exp] 138 / 6e-42 AT1G10370 308 / 4e-107 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10013282 [exp] 116 / 1e-33 AT1G10370 229 / 2e-76 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030806 [exp] 116 / 2e-33 AT1G10370 290 / 4e-100 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10026722 [exp] 91 / 2e-25 AT1G69930 55 / 6e-11 glutathione S-transferase TAU 11 (.1) Lus10006525 [exp] 90 / 6e-25 AT1G69930 57 / 1e-11 glutathione S-transferase TAU 11 (.1) Lus10016471 [exp] 58 / 4e-11 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G032800 [exp] 115 / 5e-33 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G035500 [exp] 114 / 2e-32 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.016G023200 [exp] 60 / 5e-12 AT3G09270 189 / 1e-60 glutathione S-transferase TAU 8 (.1) Potri.013G072400 [exp] 60 / 7e-12 AT3G09270 161 / 2e-49 glutathione S-transferase TAU 8 (.1) Potri.010G061600 [exp] 59 / 2e-11 AT2G29420 172 / 7e-54 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G023340 [exp] 58 / 4e-11 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.002G254000 [exp] 57 / 8e-11 AT2G29420 167 / 1e-51 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G070900 [exp] 57 / 1e-10 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.008G175100 [exp] 55 / 5e-10 AT2G29420 169 / 1e-52 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.006G024200 [exp] 54 / 8e-10 AT2G29420 188 / 4e-60 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10029518 pacid=23149428 polypeptide=Lus10029518 locus=Lus10029518.g ID=Lus10029518.BGIv1.0 annot-version=v1.0 ATGCACAAAATTAAGAGCAGCAGCATCAGCCCCACGGAGGAAGCCAAGGCAGCAGGGGAGGATCAACTCAAAGAAGGACTAGCCCTGCTGGAAGAAGCCT ATGTGAAGATCAGCAAATGCAACGACTTTTTCGGAGGGGAAACGATCGGGTTCTTGGACATTGCGTTTGGGAGCTTGTTGGGTTGGGTGGGAGCATTTTC AGCTATGATCGGGACTAAGGTGATCAACAAGGAGTCAACTCCTAGTCTAGCTAAATGGGTCGAGAAATTCTCAGCTCATGCTGTTGTGAAAGATGTGATG CTTGAGACTGAGAAACTAGTCGAGTTTGCAAAGTTTATGGCTGCCAAGAGGAAAGAGTAA
AA sequence Show only first row Show all	>Lus10029518 pacid=23149428 polypeptide=Lus10029518 locus=Lus10029518.g ID=Lus10029518.BGIv1.0 annot-version=v1.0 MHKIKSSSISPTEEAKAAGEDQLKEGLALLEEAYVKISKCNDFFGGETIGFLDIAFGSLLGWVGAFSAMIGTKVINKESTPSLAKWVEKFSAHAVVKDVM LETEKLVEFAKFMAAKRKE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G69930		ATGSTU11	glutathione S-transferase TAU ...		Lus10029518 [exp]	0	1
AT1G19250		FMO1	flavin-dependent monooxygenase...		Lus10038126 [exp]	4.5	0.7979
AT1G70870			Polyketide cyclase/dehydrase a...		Lus10008931 [exp]	4.9	0.7812
AT4G33355			Bifunctional inhibitor/lipid-t...		Lus10031282 [exp]	15.5	0.6721
					Lus10006395 [exp]	15.9	0.7881
AT2G16190			unknown protein		Lus10011284 [exp]	19.4	0.7881
AT1G69550			disease resistance protein (TI...		Lus10041559 [exp]	22.4	0.6050
AT3G54200			Late embryogenesis abundant (L...		Lus10031554 [exp]	22.4	0.7881
AT5G15630		IRX6, COBL4	IRREGULAR XYLEM 6, COBRA-LIKE4...		Lus10021142 [exp]	25.1	0.7881
					Lus10027005 [exp]	25.4	0.7828
AT1G54870			NAD(P)-binding Rossmann-fold s...		Lus10034048 [exp]	25.5	0.7391

Compare expression of checked genes

Lus10029518 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.