Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G12640 662 / 0 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G63050 637 / 0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006325 [exp] 836 / 0 AT1G12640 694 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G110100 [exp] 683 / 0 AT1G12640 731 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.003G121700 [exp] 681 / 0 AT1G12640 714 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0517 [flax] [poplar] MBOAT-like PF03062 [flax] [poplar] MBOAT MBOAT, membrane-bound O-acyltransferase family
Representative CDS sequence Show only first row Show all	>Lus10029595 pacid=23151966 polypeptide=Lus10029595 locus=Lus10029595.g ID=Lus10029595.BGIv1.0 annot-version=v1.0 ATGGCGGAGACGATCGGGGTTTCGGTCCCCGTCCTCCGCTTCCTCCTCTGCTTCGCGGCGACGATTCCGGTGAGTCTGTTCCACCGTGTCGTCCCCGGGA CTCTCCCCAAGCACATCTACGCAGCTGCGTCCGGTGCTATTCTGTCGTATCTGTCATTTGGGTTCTCCTCCAATCTCCACTTCTTGGTCCCCATGTTGCT CGGTTATGCCGCCATGGTCATCTCTCGCGCCCACTGTGGAATCATCACCTTCGTTGTTGGATTTGGTTATCTCATTGGCTGCCATGTATATTACATGAGT GGTGATGCATGGAAAGAAGGAGGCATTGATGCTACTGGGGCACTAATGGTGTTAACACTGAAAGTCATATCATGCGCCATGAACTACAATGATGGTTTGC TAAAGGAAGAAGAAAACTTGCGGGACGCTCAGAAGAAAAACCGCTTGATAAAGCTTCCGTCGTTGATCGAGTACTTTGGTTACTGCCTTTGCTGCGGTAC ACACTTTGCTGGTCCGGTTTATGAAATGAAGGATTACATTGAGTGGACGGAACGGAGAGGGCCAACTCTACGAGCCATTATTCAAGCTGGCATTTGCATG GGCCTGTACTTGTATCTTGTGCCTTACCATCCTTTGTCCCGGTTCACTGATTTGGTATATCAAGAATGGGGCTTCTGGAGACGATTGAGTTATCAGTACA TGGCCGGCTTCACAGCACGCTGGAAGTATTACTTTATCTGGTCAATTTCAGAGGCTTCTATGATTTCCTCTGGTCTGGGTTTCAGTGGTTGGACAGATAC TTCACCAGCAAAGCCGCGATGGGATTATGCTAAAAATGTTGATATTCTCGGTGTTGAGTTTGTCAAGAGCGGAGTTGTCTTGCCTCTTGTGTGGAACATC CAAGTCAGCTCATGGCTTCGCTACTATGTCTACGAGAGACTCGTTAAGAAGGGACAGAAGGCTGGTTTCTTTCAGTTGTTGGCCACACAAACTACCAGTG CTGTTTGGCATGGGCTATATCCTGGTTACATCATCTTCTTTGTTCAATCTGCACTGATGATTGCTGGATCCAGAGTTATATACAGATGGGAACAAGCCTC AAAGGGTCTAATCAAGAAGGTTTTCGCTTTAGCAAACTTTGCTTACACAGTCCTCGTCTTAAACTACTCCTGCGTCGGGTTCATGGTACTGAGCTTGCAC GAAACAATTGCTGCTTACAGCAGCGTATACTACATCGGAACGATTCTGCCCATTGCATTGATCCTTCTCGGCTCTGTAATCAAACCACCAAGGCCTGCTC GATCGAAGCCCCGAAAGGAAGAATAA
AA sequence Show only first row Show all	>Lus10029595 pacid=23151966 polypeptide=Lus10029595 locus=Lus10029595.g ID=Lus10029595.BGIv1.0 annot-version=v1.0 MAETIGVSVPVLRFLLCFAATIPVSLFHRVVPGTLPKHIYAAASGAILSYLSFGFSSNLHFLVPMLLGYAAMVISRAHCGIITFVVGFGYLIGCHVYYMS GDAWKEGGIDATGALMVLTLKVISCAMNYNDGLLKEEENLRDAQKKNRLIKLPSLIEYFGYCLCCGTHFAGPVYEMKDYIEWTERRGPTLRAIIQAGICM GLYLYLVPYHPLSRFTDLVYQEWGFWRRLSYQYMAGFTARWKYYFIWSISEASMISSGLGFSGWTDTSPAKPRWDYAKNVDILGVEFVKSGVVLPLVWNI QVSSWLRYYVYERLVKKGQKAGFFQLLATQTTSAVWHGLYPGYIIFFVQSALMIAGSRVIYRWEQASKGLIKKVFALANFAYTVLVLNYSCVGFMVLSLH ETIAAYSSVYYIGTILPIALILLGSVIKPPRPARSKPRKEE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G12640			MBOAT (membrane bound O-acyl t...		Lus10029595 [exp]	0	1
AT3G60870	AT-hook	AHL18	AT-hook motif nuclear-localize...		Lus10015862 [exp]	6.5	0.9065
AT2G36780			UDP-Glycosyltransferase superf...		Lus10012148 [exp]	6.6	0.9222
AT5G60640		ATPDI2, ATPDIL1...	ARABIDOPSIS THALIANA PROTEIN D...		Lus10021478 [exp]	7.6	0.9153
AT3G02780		IDI2, IPIAT1, I...	ATISOPENTENYL DIPHOSPHE ISOMER...		Lus10020210 [exp]	14.4	0.8989
AT5G60700			glycosyltransferase family pro...		Lus10041317 [exp]	15.4	0.9055
AT4G12010			Disease resistance protein (TI...		Lus10028058 [exp]	17.3	0.8935
AT5G15640			Mitochondrial substrate carrie...		Lus10035134 [exp]	19.5	0.8879
AT2G41810			Protein of unknown function, D...		Lus10031067 [exp]	21.9	0.8921
AT3G04580		EIN4	ETHYLENE INSENSITIVE 4, Signal...		Lus10006574 [exp]	24.3	0.8646
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10021103 [exp]	24.5	0.8994

Compare expression of checked genes

Lus10029595 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.