Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G42570 209 / 4e-69 B-cell receptor-associated 31-like (.1) AT1G11905 161 / 4e-50 B-cell receptor-associated protein 31-like (.1.2) AT5G48660 110 / 2e-30 B-cell receptor-associated protein 31-like (.1) AT3G07190 98 / 1e-25 B-cell receptor-associated protein 31-like (.1) AT3G20450 93 / 2e-24 B-cell receptor-associated protein 31-like (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035283 [exp] 289 / 7e-101 AT5G42570 244 / 9e-83 B-cell receptor-associated 31-like (.1) Lus10031546 [exp] 234 / 1e-78 AT5G42570 287 / 3e-99 B-cell receptor-associated 31-like (.1) Lus10015132 [exp] 210 / 3e-69 AT5G42570 258 / 7e-88 B-cell receptor-associated 31-like (.1) Lus10020025 [exp] 168 / 7e-53 AT1G11905 225 / 9e-75 B-cell receptor-associated protein 31-like (.1.2) Lus10011842 [exp] 118 / 2e-33 AT5G48660 270 / 1e-92 B-cell receptor-associated protein 31-like (.1) Lus10038188 [exp] 109 / 1e-29 AT3G07190 265 / 1e-90 B-cell receptor-associated protein 31-like (.1) Lus10022777 [exp] 108 / 2e-29 AT5G48660 271 / 9e-93 B-cell receptor-associated protein 31-like (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G007900 [exp] 196 / 9e-64 AT5G42570 259 / 3e-88 B-cell receptor-associated 31-like (.1) Potri.011G007200 [exp] 194 / 3e-63 AT5G42570 278 / 1e-95 B-cell receptor-associated 31-like (.1) Potri.014G154800 [exp] 156 / 2e-48 AT5G42570 152 / 2e-46 B-cell receptor-associated 31-like (.1) Potri.014G191500 [exp] 135 / 6e-40 AT5G48660 237 / 2e-79 B-cell receptor-associated protein 31-like (.1) Potri.002G245300 [exp] 123 / 3e-35 AT3G07190 239 / 3e-80 B-cell receptor-associated protein 31-like (.1) Potri.011G089100 [exp] 120 / 5e-35 AT5G42570 140 / 5e-43 B-cell receptor-associated 31-like (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF05529 [flax] [poplar] Bap31 Bap31/Bap29 transmembrane region
Representative CDS sequence Show only first row Show all	>Lus10030043 pacid=23159745 polypeptide=Lus10030043 locus=Lus10030043.g ID=Lus10030043.BGIv1.0 annot-version=v1.0 ATGATACAGCTTCTATACGGAGTGATCTTCGGCCAGATGGTGTTGATCCTGTTGCTGCTGTTCAAGACGCCGCTGCGGAAGCTGGTTATCATGGCCTTGG ATCGGCTCAAGCGAGGGAGAGGTCCCATCGTTGTGAAAACTGTCTCCGGAACGCTCCTGCTGGTACTTTTCTCCAGCCTTTACAGTATGTTCACGATTCA GAATCGCTCCATCGAGGCCGGTGCTCCCAATCCTACCGACCAGGTCCTCATGTCCCGCCACCTCCTCGAAGCCTCTCTCATGGGATTTGTGCTGTTCCTT TCGCTGATGATCGACAGGCTACACCACTACATCAGGGAGCTTCGCCAGCTAAGGAAGACAATGGAGACCGCCAAGAAACACACTCGAGGAGTAGACGATA CCAAAACCACCAGCAGCAGCAACTCAGAAGAGATGAAAGCACTCGAAGAAGAAGCTGCTTCTCTACGCAGTAAAGTGAAGCAGCTGGAAGCCGAATGTGA AGCCAAGACCAATGAAATCAAAGCTGCAGAAGAGATATTCGAGCCCAAGAAGGACATGTAA
AA sequence Show only first row Show all	>Lus10030043 pacid=23159745 polypeptide=Lus10030043 locus=Lus10030043.g ID=Lus10030043.BGIv1.0 annot-version=v1.0 MIQLLYGVIFGQMVLILLLLFKTPLRKLVIMALDRLKRGRGPIVVKTVSGTLLLVLFSSLYSMFTIQNRSIEAGAPNPTDQVLMSRHLLEASLMGFVLFL SLMIDRLHHYIRELRQLRKTMETAKKHTRGVDDTKTTSSSNSEEMKALEEEAASLRSKVKQLEAECEAKTNEIKAAEEIFEPKKDM

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G42570			B-cell receptor-associated 31-...		Lus10030043 [exp]	0	1
AT4G00300			fringe-related protein (.1.2)		Lus10018823 [exp]	3.7	0.9291
AT1G19210	AP2_ERF		Integrase-type DNA-binding sup...		Lus10033420 [exp]	5.7	0.9209
AT3G19830		NTMCTYPE5.2 ,NT...	Calcium-dependent lipid-bindin...		Lus10034197 [exp]	6.0	0.8750
AT1G19210	AP2_ERF		Integrase-type DNA-binding sup...		Lus10034885 [exp]	6.0	0.9185
AT3G18930			RING/U-box superfamily protein...		Lus10012033 [exp]	8.5	0.8948
AT4G29780			unknown protein		Lus10011946 [exp]	10.6	0.9173
AT1G01260	bHLH	bHLH013, INU4	basic helix-loop-helix (bHLH) ...		Lus10005966 [exp]	11.2	0.8797
AT4G29780			unknown protein		Lus10027622 [exp]	11.6	0.9128
AT1G74450			Protein of unknown function (D...		Lus10042809 [exp]	12.7	0.8881
AT5G47390	MYB		myb-like transcription factor ...		Lus10004384 [exp]	14.9	0.9044

Compare expression of checked genes

Lus10030043 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.