Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G80180 73 / 5e-17 unknown protein AT1G15400 65 / 7e-14 unknown protein AT5G20100 54 / 3e-10 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10014488 [exp] 196 / 1e-65 AT1G80180 68 / 3e-15 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G062200 [exp] 84 / 2e-21 AT1G15400 79 / 1e-19 unknown protein Potri.001G172100 [exp] 78 / 3e-19 AT1G15400 100 / 3e-28 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10030064 pacid=23172606 polypeptide=Lus10030064 locus=Lus10030064.g ID=Lus10030064.BGIv1.0 annot-version=v1.0 ATGGAGCTCGGCGGTCTACAGAGATCTGCTACTTCCTACCGGCGGCAGGGGTCTTCCGGCCTGATTTGGGACGACAAGCTCATCGCCGAATTCTGTAGTC AGGCCGAAGCCGAGAAAGCCGCCGCAGCTGCAGCCGCAGGGGGTGGTGGAGGAGATCCACCGTTGACCGCTCCCGATGCTCTTTCCGACACCACAAACCG CCAGACCAGAGCCGATACGGTGTCTCCGGAAGGGAAGATGCGGCGCAGCCACTCAGCCGGGAGTCGCGCCTACCGCGCTCTCAAGGTCGCTTCGTCGCCG AACCTCGATCCTCCTTCTCCGAAGGTCTCCACCTGTGCCTTCTGCGGATTGTTCGCGAAACCTACTCCGTCTGCCGATGGCCGCCGCCGCCGCCCGCGNN NNNNNNNNNNNNNNGCCGCCGCCGCCGGCAGCAGCCGCAGAAGCAGATGA
AA sequence Show only first row Show all	>Lus10030064 pacid=23172606 polypeptide=Lus10030064 locus=Lus10030064.g ID=Lus10030064.BGIv1.0 annot-version=v1.0 MELGGLQRSATSYRRQGSSGLIWDDKLIAEFCSQAEAEKAAAAAAAGGGGGDPPLTAPDALSDTTNRQTRADTVSPEGKMRRSHSAGSRAYRALKVASSP NLDPPSPKVSTCAFCGLFAKPTPSADGRRRRPXXXXXXAAAAGSSRRSR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G80180			unknown protein		Lus10030064 [exp]	0	1
AT3G57090		FIS1A, BIGYIN	FISSION 1A, Tetratricopeptide ...		Lus10036023 [exp]	3.3	0.9353
AT3G62770		ATATG18A	autophagy 18a, Transducin/WD40...		Lus10031500 [exp]	3.5	0.9325
AT1G11050			Protein kinase superfamily pro...		Lus10028549 [exp]	4.2	0.9334
AT4G25225			unknown protein		Lus10027209 [exp]	7.6	0.9165
AT2G45380			unknown protein		Lus10015873 [exp]	8.8	0.9033
AT1G03070			Bax inhibitor-1 family protein...		Lus10022085 [exp]	9.7	0.9233
AT5G53560		B5#2, ATB5-A, A...	ARABIDOPSIS CYTOCHROME B5 ISOF...		Lus10022357 [exp]	13.8	0.9264
AT4G24290			MAC/Perforin domain-containing...		Lus10010894 [exp]	20.4	0.9142
AT4G30600			signal recognition particle re...		Lus10017891 [exp]	20.9	0.9320
AT4G24290			MAC/Perforin domain-containing...		Lus10012717 [exp]	21.4	0.9209

Compare expression of checked genes

Lus10030064 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.