Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G39370 135 / 7e-37 MAKR4 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein AT2G37380 66 / 5e-12 MAKR3 MEMBRANE-ASSOCIATED KINASE REGULATOR 3, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003309 [exp] 405 / 6e-142 AT2G39370 175 / 2e-52 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Lus10040336 [exp] 193 / 1e-58 AT2G39370 174 / 8e-52 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Lus10023461 [exp] 162 / 5e-47 AT2G39370 177 / 4e-53 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Lus10024441 [exp] 57 / 8e-09 AT2G37380 87 / 8e-19 MEMBRANE-ASSOCIATED KINASE REGULATOR 3, unknown protein Lus10025286 [exp] 41 / 0.001 AT2G37380 88 / 2e-19 MEMBRANE-ASSOCIATED KINASE REGULATOR 3, unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G048300 [exp] 182 / 5e-54 AT2G39370 175 / 2e-51 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Potri.010G212800 [exp] 169 / 2e-48 AT2G39370 176 / 2e-51 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Potri.016G080800 [exp] 108 / 1e-26 AT2G39370 157 / 9e-45 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein Potri.006G214700 [exp] 85 / 3e-18 AT2G39370 116 / 2e-29 MEMBRANE-ASSOCIATED KINASE REGULATOR 4, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10030311 pacid=23153067 polypeptide=Lus10030311 locus=Lus10030311.g ID=Lus10030311.BGIv1.0 annot-version=v1.0 ATGGCATCTCAAACTTCCTCTCATTTCCCTTTCCCCTCCACCACCAAACTCAGCACATACAGCAGAATGGCTGAAATGATTCTGCCACCAAATGCTGAAT CAACAGCACCAGATGATGATGACTACATCGACATGGAAATCAGCTCATTCTCATCATCCTTCCTCTTCCATAATCCCGTCAACTCTAGAGAGTTTGAGTT CCAAATGTCATCATCATCACCATCATCATCAAACCACACTACTACTTCTCCAGCTGATGAGCTCTTCTACAAAGGAAAGCTCCTCCCCCTTCACCTCCCA CCGCGTTTGCGGATGTTCGCCAAGCTCCTCGAGAACAGCAACTTACCACCCTCTTCTTCTATCTATGGTACCGAGTCCACAAAACATGTGGTTGATGTTG ATGAAGAATTGTACAGCACCCCATCAGTGACAACTCCAACCGCAGCAAGTACACCTTATGAGTCCTGCACCATATCTCCAGCTGATTCCTGCCACGTCAG CAGGGAGCTTACCCCGGACGACTTCTTGCAGGAGTATGCCAATCCAAAGAGGTCATGGGGCGCCAAGAAGCTTAAGCTGATCAAACAGTCTAGGAGTCTA TGTTCAAAGCTTAAAGCTTCTAGATCTTACCTCAAGGCCTTGTTTGGGAGGTCCGGTTGTTCAGATGATTCTTCGTGTAAAACAGCTGCAACTGCTGCTA AAGTTGCAGATGAAGGAACCATTTCTAAAGAAACCGGACAGCAGACAAAGAAACCACAGATACAAACCATAGTATCATTGCCTGCTAACAAACAGACGGC AAATGAGGATTGCAATTCTAGGCTGCACAGGAGATCATTCTCAATGGATATTAAATGTAAATCGAATACCAAGTCCTCATCAGCTTCTTCCTATTCATCA TCATCATCATCTTCAGGATTGAGCAGCTCTATTGGGTACCGAGGGTTGCCATTTCTCAAGAGAAGTAGCAGTGTTGTAACTTCAGAGATTGACAACCCAA TTCAAGGAGCTATTGCACATTGCAAACAGTCTCAGGATAATTTACACCCTGTAAAGTGA
AA sequence Show only first row Show all	>Lus10030311 pacid=23153067 polypeptide=Lus10030311 locus=Lus10030311.g ID=Lus10030311.BGIv1.0 annot-version=v1.0 MASQTSSHFPFPSTTKLSTYSRMAEMILPPNAESTAPDDDDYIDMEISSFSSSFLFHNPVNSREFEFQMSSSSPSSSNHTTTSPADELFYKGKLLPLHLP PRLRMFAKLLENSNLPPSSSIYGTESTKHVVDVDEELYSTPSVTTPTAASTPYESCTISPADSCHVSRELTPDDFLQEYANPKRSWGAKKLKLIKQSRSL CSKLKASRSYLKALFGRSGCSDDSSCKTAATAAKVADEGTISKETGQQTKKPQIQTIVSLPANKQTANEDCNSRLHRRSFSMDIKCKSNTKSSSASSYSS SSSSSGLSSSIGYRGLPFLKRSSSVVTSEIDNPIQGAIAHCKQSQDNLHPVK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G39370		MAKR4	MEMBRANE-ASSOCIATED KINASE REG...		Lus10030311 [exp]	0	1
AT3G05250			RING/U-box superfamily protein...		Lus10029940 [exp]	3.9	0.7606
					Lus10029450 [exp]	5.2	0.8399
AT5G56170		LLG1	LORELEI-LIKE-GPI-ANCHORED PROT...		Lus10027120 [exp]	5.7	0.8310
AT1G55020		ATLOX1, LOX1	ARABIDOPSIS LIPOXYGENASE 1, li...		Lus10008202 [exp]	6.3	0.8098
AT5G16510		RGP5	reversibly glycosylated protei...		Lus10009555 [exp]	9.0	0.7768
AT3G14110		FLU	FLUORESCENT IN BLUE LIGHT, Tet...		Lus10037686 [exp]	9.2	0.7648
AT4G17486			PPPDE putative thiol peptidase...		Lus10043293 [exp]	13.0	0.7813
AT5G45550		MOB1-like	MOB1-like, Mob1/phocein family...		Lus10017172 [exp]	13.7	0.8173
					Lus10020961 [exp]	16.0	0.7285
					Lus10024547 [exp]	16.7	0.7292

Compare expression of checked genes

Lus10030311 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.