Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 148 / 1e-44 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73325 110 / 2e-29 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 109 / 3e-29 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73330 87 / 1e-20 ATDR4 drought-repressed 4 (.1) AT1G72290 51 / 1e-07 Kunitz family trypsin and protease inhibitor protein (.1) AT3G04330 41 / 0.0002 Kunitz family trypsin and protease inhibitor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007888 [exp] 320 / 8e-113 AT1G17860 125 / 7e-37 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039163 [exp] 271 / 3e-92 AT1G17860 167 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013770 [exp] 267 / 5e-91 AT1G17860 166 / 6e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007889 [exp] 262 / 4e-89 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007890 [exp] 256 / 2e-86 AT1G17860 166 / 7e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007892 [exp] 254 / 7e-86 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030354 [exp] 254 / 8e-86 AT1G17860 160 / 1e-49 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007902 [exp] 253 / 3e-85 AT1G17860 162 / 3e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013730 [exp] 242 / 2e-81 AT1G17860 175 / 2e-55 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 198 / 4e-64 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 197 / 1e-63 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 192 / 6e-62 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 170 / 6e-53 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 169 / 1e-52 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 162 / 3e-50 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 127 / 2e-36 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 81 / 9e-19 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.001G309900 [exp] 77 / 4e-17 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.007G111800 [exp] 77 / 4e-17 AT1G73260 79 / 3e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10030355 pacid=23153182 polypeptide=Lus10030355 locus=Lus10030355.g ID=Lus10030355.BGIv1.0 annot-version=v1.0 ATGGCGGCTCAAGCATCAGTTATGCTTCCACCATTAATACTACTACTACTAACTCCCCTGTTTCTGTCCGCTGCCTTAACCGATCCGGCGGCGGCGGAAC CAAAGTACAACACGGAGGCCGCCGTGGCAGCTGGACCGCCTGTCCCCATCCTAGACATAGACGGAAAAGCCGTCCGAGCAGGCAGCAGCTACTACATCAT ACCCGCCACGTCACCAGCCACCGATTTCGGCGGAGTCAGAATGGCCAGCTCAACAAACGACTCCAACACTTGTCCACTCTCTGTCATCCAGGATCCCCAC GAGGACTCGAGTGGGACCCCGCTGATGTTCCTCCCCGTGGCGACCAAAGTAGGGTACATGGTCCGCACGTCTACCGACCTTAACATAGAGTTCACGGCAG ACGACACGGCCACCTGCGACGAGGGCAACGTGTGGAAGGTGGACGACTACGATGACGACGTGGAGCAGTGGTTCGTGGGGACCGGTGGGGTGGAAGGGAA GCCCGGTCCGAGGACGATCAACAACTGGTTCAAGATCGTGAAATATGGAGGGAGCTACAAGGTGGCGTACTGTCCAGGAGTTTGTAAATCGTGTAAGATT AAGTGTAAGGATGTAGGGTTGTTTGTTGATGAGAATGGGACCAGGAGGCTTGCTCTTACTGAAGACCACCCTTTTGTTGTCAGCTTCATGAAGGCTGATT AA
AA sequence Show only first row Show all	>Lus10030355 pacid=23153182 polypeptide=Lus10030355 locus=Lus10030355.g ID=Lus10030355.BGIv1.0 annot-version=v1.0 MAAQASVMLPPLILLLLTPLFLSAALTDPAAAEPKYNTEAAVAAGPPVPILDIDGKAVRAGSSYYIIPATSPATDFGGVRMASSTNDSNTCPLSVIQDPH EDSSGTPLMFLPVATKVGYMVRTSTDLNIEFTADDTATCDEGNVWKVDDYDDDVEQWFVGTGGVEGKPGPRTINNWFKIVKYGGSYKVAYCPGVCKSCKI KCKDVGLFVDENGTRRLALTEDHPFVVSFMKAD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10030355 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10007888 [exp]	3.2	0.9472
AT1G17860			Kunitz family trypsin and prot...		Lus10039210 [exp]	4.0	0.9728
AT1G49310			unknown protein		Lus10040476 [exp]	4.6	0.9339
AT1G17860			Kunitz family trypsin and prot...		Lus10013730 [exp]	5.1	0.9672
AT1G17860			Kunitz family trypsin and prot...		Lus10007890 [exp]	9.2	0.9576
AT1G17860			Kunitz family trypsin and prot...		Lus10022302 [exp]	10.5	0.9618
AT1G13090		CYP71B28	"cytochrome P450, family 71, s...		Lus10002670 [exp]	11.6	0.9415
AT1G17860			Kunitz family trypsin and prot...		Lus10042301 [exp]	13.6	0.9588
AT1G17860			Kunitz family trypsin and prot...		Lus10039209 [exp]	15.5	0.9398
AT4G37390		AUR3, YDK1, GH3...	YADOKARI 1, AUXIN UPREGULATED ...		Lus10010391 [exp]	16.2	0.9502

Compare expression of checked genes

Lus10030355 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.