Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G19760 466 / 8e-168 Mitochondrial substrate carrier family protein (.1) AT4G24570 169 / 7e-51 DIC2 dicarboxylate carrier 2 (.1) AT2G22500 155 / 2e-45 UCP5, ATPUMP5, DIC1 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) AT5G09470 139 / 4e-39 DIC3 dicarboxylate carrier 3 (.1) AT3G54110 138 / 5e-39 ATUCP1, UCP1, UCP2, UCP, ATPUMP1 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) AT1G14140 132 / 1e-36 Mitochondrial substrate carrier family protein (.1) AT5G58970 130 / 5e-36 ATUCP2 uncoupling protein 2 (.1.2) AT4G03115 95 / 2e-22 Mitochondrial substrate carrier family protein (.1) AT5G01340 88 / 5e-20 AtmSFC1 mitochondrial succinate-fumarate carrier 1, Mitochondrial substrate carrier family protein (.1) AT5G42130 67 / 2e-12 AtMfl1 MitoFerrinLike1, Mitochondrial substrate carrier family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007883 [exp] 527 / 0 AT5G19760 536 / 0.0 Mitochondrial substrate carrier family protein (.1) Lus10021123 [exp] 137 / 3e-38 AT3G54110 521 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10040709 [exp] 135 / 1e-37 AT5G58970 512 / 0.0 uncoupling protein 2 (.1.2) Lus10027755 [exp] 135 / 1e-37 AT3G54110 515 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10035538 [exp] 134 / 4e-37 AT3G54110 512 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10017187 [exp] 133 / 5e-37 AT3G54110 501 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10030443 [exp] 125 / 6e-34 AT1G14140 421 / 3e-149 Mitochondrial substrate carrier family protein (.1) Lus10016445 [exp] 120 / 5e-32 AT5G58970 493 / 1e-177 uncoupling protein 2 (.1.2) Lus10035936 [exp] 95 / 4e-23 AT4G24570 209 / 5e-67 dicarboxylate carrier 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G004500 [exp] 471 / 9e-170 AT5G19760 519 / 0.0 Mitochondrial substrate carrier family protein (.1) Potri.003G220400 [exp] 466 / 8e-168 AT5G19760 498 / 6e-180 Mitochondrial substrate carrier family protein (.1) Potri.002G104400 [exp] 181 / 4e-55 AT2G22500 427 / 1e-151 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G045100 [exp] 177 / 7e-54 AT2G22500 451 / 6e-161 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G045150 [exp] 177 / 1e-53 AT2G22500 457 / 3e-163 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.005G157300 [exp] 177 / 1e-53 AT2G22500 412 / 2e-145 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G047800 [exp] 175 / 8e-53 AT4G24570 435 / 2e-154 dicarboxylate carrier 2 (.1) Potri.017G045332 [exp] 174 / 2e-52 AT2G22500 410 / 1e-144 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.007G113000 [exp] 170 / 4e-51 AT4G24570 404 / 4e-142 dicarboxylate carrier 2 (.1) Potri.016G110100 [exp] 146 / 4e-42 AT3G54110 483 / 5e-174 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10030361 pacid=23152960 polypeptide=Lus10030361 locus=Lus10030361.g ID=Lus10030361.BGIv1.0 annot-version=v1.0 ATGGCTGCTACCTGCGTTATTCAGCCAATCGATATGATTAAGGTGAGGATCCAATTGGGTCAGGGATCAGCATCTCATGTCGCCAAGACCATGCTCAAGG AGGAGGGTGTTGCAGCCTTTTACAAGGGTCTGTCGGCTGGACTACTGAGGCAAGCCACCTACACAACTGCTCGGCTTGGGTCATTCAGGATTTTGACCAA CAAGGCAATTGAGGCAAACGACGGGAAGCCTCTCCCTCTGTATCAAAAGGCTTTGTGTGGTCTGACTGCTGGAGCTATTGGAGCATCTGTGGGAAGCCCT GCAGATTTAGCCCTCATCCGTATGCAGGCAGATGCCACCTTGCCTGCTGCTCAGCGCCGACACTATACCAATGCCTTCCATGCTCTTAGCCGTATAGTGG CAGATGAAGGAGTTTTGGCTCTCTGGAAGGGTGCAGGCCCTACTGTTGTCAGAGCTATGGCTTTGAACATGGGAATGCTTGCTTCCTATGATCAAAGTCT TGAATTGTTCAGAGATAACCTTGGTTTTGGAGAATTGCCTACTGTCGTAGGTGCCAGTGCCATTTCAGGGTTCTTTGCTGCAGCTTGCAGTCTTCCATTT GATTATGTGAAAACACAGATTCAGAAAATGCAACCTGATGCTGAAGGGAAGTATCCATACACTGGCTCCATGGATTGTGCTATGAAGACCCTCAAGGCAG GTGGACCACTGAAGTTCTACACTGGATTCCCAGTGTACTGTGTTCGAATTGCTCCCCATGTCATGGGGGGCGTTCTGACTGAGCTGTTGATTGTGCAGAT GACGTGGATATTCCTGAACCAGATCCAGAAGATGGAGAAGAAAATCGGATTATAG
AA sequence Show only first row Show all	>Lus10030361 pacid=23152960 polypeptide=Lus10030361 locus=Lus10030361.g ID=Lus10030361.BGIv1.0 annot-version=v1.0 MAATCVIQPIDMIKVRIQLGQGSASHVAKTMLKEEGVAAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSP ADLALIRMQADATLPAAQRRHYTNAFHALSRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSLELFRDNLGFGELPTVVGASAISGFFAAACSLPF DYVKTQIQKMQPDAEGKYPYTGSMDCAMKTLKAGGPLKFYTGFPVYCVRIAPHVMGGVLTELLIVQMTWIFLNQIQKMEKKIGL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G19760			Mitochondrial substrate carrie...		Lus10030361 [exp]	0	1
AT1G49750			Leucine-rich repeat (LRR) fami...		Lus10014085 [exp]	2.0	0.8676
AT1G80510			Transmembrane amino acid trans...		Lus10034093 [exp]	3.3	0.8998
AT3G12110		ACT11	actin-11 (.1)		Lus10040826 [exp]	8.0	0.8711
AT5G64970			Mitochondrial substrate carrie...		Lus10026043 [exp]	8.4	0.8676
AT2G47650		UXS4	UDP-xylose synthase 4 (.1.2)		Lus10008217 [exp]	8.4	0.8605
AT5G12860		DIT1	dicarboxylate transporter 1 (....		Lus10002560 [exp]	8.7	0.8496
AT4G01400			unknown protein		Lus10030195 [exp]	10.7	0.8684
AT1G67930			Golgi transport complex protei...		Lus10007330 [exp]	15.3	0.8674
AT1G62020			Coatomer, alpha subunit (.1)		Lus10016481 [exp]	17.5	0.8649
AT1G51540			Galactose oxidase/kelch repeat...		Lus10034826 [exp]	19.6	0.8572

Compare expression of checked genes

Lus10030361 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.