Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G47600 642 / 0 ATMHX1, ATMHX MAGNESIUM/PROTON EXCHANGER 1, magnesium/proton exchanger (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007879 [exp] 827 / 0 AT2G47600 755 / 0.0 MAGNESIUM/PROTON EXCHANGER 1, magnesium/proton exchanger (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G128600 [exp] 650 / 0 AT2G47600 777 / 0.0 MAGNESIUM/PROTON EXCHANGER 1, magnesium/proton exchanger (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01699 [flax] [poplar] Na_Ca_ex Sodium/calcium exchanger protein
Representative CDS sequence Show only first row Show all	>Lus10030365 pacid=23152973 polypeptide=Lus10030365 locus=Lus10030365.g ID=Lus10030365.BGIv1.0 annot-version=v1.0 ATGGCCGCCTGGCTCAGGACTCTACTCTACTGCTTAGGACTTGCTTATTGCTTTGTTGGATTATCGGCCATAACCGCACGATTCTTCCGTTCGATGGCGA ATGTCGTCAAGCATTCTCGTGAGGTCGTGGAGATTGATCCGTACACCAAAGCTGAAGTTGTCCGCCGTGAGAAAGTCTGGAACTACGCCATTGCTGATAT CTCCCTTCTCGCCTTCGGCACCAGCTTTCCCCAGATTTCGCTCGCCACTATCGACGCCATCCGCAACATCAGCAACACTTATGCTGGAGGTAGGACTGGG TCCTGGAACGCTTGTTGGTTCAGCTGCTTTCGATCTTTTCCCGATTCATGCCGTTTGTGTTGTGGTCCCGAAAGCTGGAGATTGAAGAAGATATCTGATA TTGGAGTCTGGCTGGTGGAGCTCTTCTGGTCTTTCTGGGCTTATATATGGCTGTTCATCATTTTGGAGGCAAGTAATGCTAATGATGTGTGGACTCCAAA TGTTATAACTCTATGGGAAGCTTTGTTTACAGTACTTCAGTATGGGTTACTTCTGATACACGCTTATGCTCAGGACAAACGTTGGCCTTACTTATCACTA CCCATGGCGAGAGGCGAGAGGCCGGAAGAATGGGTGCCGGAAGAGATCCCTTTGTGCAACAATCGAAAACCGGAGGTACTCCATGACCCGGAATCAAGTG GCAACGTTGTTGATATCTTCTCGATTCATTCAAACACCGGCATAGACTCAGATTATCAGAATTTGTCAGGATCCGTGGCGGAGTGTTCGAATAATCCTTG TAACGAGGAGGAAAATGAAAATCTGGGTATTCTCGCGATTTGGAGACAGCAGTTTGTTGATTCACTCAGGCTGGAAAATCCGGAATCGAGAAAACTGGAG AGCATTTTCGTGAGGGCGGCAAGAATCTCCTGGCAGTTACTGGTCGCGCCATGGATGCTCGTGTTTGCTTTCGTGCCGCCTTGCCAGATTGGTTATGGAT GGATAGCCTTCATATGCTCTTTGATCTTTATCAGCGGGATAGCCTACATCGTCACCCGCATCACCGATCTCATAAGCTGCGTCACAGGAATAAACCCGTA CGTGATTGCATTGACGGCGTTGGCAAGTGGGACTTCGTGGCCGGATCTCGTAGCCAGTAAGATAGCTGCTGAACGTCAGTTAACGGCAGATTCCGCGATA GCAAACATCACTTGCAGCAATTCCGTGAACATATACGTGGGGATCGGAGTTCCGTGGCTGATCAATACGACGTACAATTACTTCAAGTATAAAGAACCGT TGTGGATAGAGAATGCCAAAGGGCTAAGCTTCTCGTTGCTGATATTCTTCGCCACATCGGTGGGTTGCATCGGAGTTCTGGTGTTTAGGCGGTTGACTTT AGGTGCGGAGCTCGGAGGGCTGAGGATTTGGGCATGGCTTTCCTCTGGCTATCTTATGTTGCTTTGGGTTGTCTTTGTAGTTCTCTCTTCCCTCAGAATC ACTGACATCATCTGA
AA sequence Show only first row Show all	>Lus10030365 pacid=23152973 polypeptide=Lus10030365 locus=Lus10030365.g ID=Lus10030365.BGIv1.0 annot-version=v1.0 MAAWLRTLLYCLGLAYCFVGLSAITARFFRSMANVVKHSREVVEIDPYTKAEVVRREKVWNYAIADISLLAFGTSFPQISLATIDAIRNISNTYAGGRTG SWNACWFSCFRSFPDSCRLCCGPESWRLKKISDIGVWLVELFWSFWAYIWLFIILEASNANDVWTPNVITLWEALFTVLQYGLLLIHAYAQDKRWPYLSL PMARGERPEEWVPEEIPLCNNRKPEVLHDPESSGNVVDIFSIHSNTGIDSDYQNLSGSVAECSNNPCNEEENENLGILAIWRQQFVDSLRLENPESRKLE SIFVRAARISWQLLVAPWMLVFAFVPPCQIGYGWIAFICSLIFISGIAYIVTRITDLISCVTGINPYVIALTALASGTSWPDLVASKIAAERQLTADSAI ANITCSNSVNIYVGIGVPWLINTTYNYFKYKEPLWIENAKGLSFSLLIFFATSVGCIGVLVFRRLTLGAELGGLRIWAWLSSGYLMLLWVVFVVLSSLRI TDII

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G47600		ATMHX1, ATMHX	MAGNESIUM/PROTON EXCHANGER 1, ...		Lus10030365 [exp]	0	1
					Lus10002467 [exp]	2.6	0.7123
AT5G41590			Protein of unknown function (D...		Lus10028756 [exp]	7.1	0.7207
AT3G06580		GAL1, GALK	GALACTOSE KINASE 1, Mevalonate...		Lus10016320 [exp]	11.6	0.7671
AT5G45820		PKS18, CIPK20, ...	SNF1-RELATED PROTEIN KINASE 3....		Lus10034212 [exp]	12.3	0.7321
AT1G62960		ACS10	ACC synthase 10 (.1)		Lus10006676 [exp]	13.2	0.7321
AT1G25270			nodulin MtN21 /EamA-like trans...		Lus10020819 [exp]	21.0	0.6939
AT4G37420			Domain of unknown function (DU...		Lus10016022 [exp]	21.5	0.7180
AT4G32680			unknown protein		Lus10035889 [exp]	26.1	0.7107
AT2G38290		AMT2;1, ATAMT2	AMMONIUM TRANSPORTER 2;1, ammo...		Lus10003093 [exp]	32.0	0.7073
AT1G01770			unknown protein		Lus10014782 [exp]	36.6	0.7071

Compare expression of checked genes

Lus10030365 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.