Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24040 252 / 6e-82 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030837 [exp] 488 / 2e-174 AT1G24040 289 / 2e-96 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G146000 [exp] 271 / 3e-89 AT1G24040 317 / 9e-108 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.010G095800 [exp] 267 / 1e-87 AT1G24040 287 / 4e-96 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10030649 pacid=23140545 polypeptide=Lus10030649 locus=Lus10030649.g ID=Lus10030649.BGIv1.0 annot-version=v1.0 ATGGCGGCAGCTGCAACACTCTCACTATCTCTAACTCCCACTTCCTCTTCAGACACGTTACTCCCTTCTTCCCGCCACAGACCCCGATTCCTCCTCCCCC ACCATTTCTCCATATCTCACCCATCCCGATTCCGCCGCCTAATCCCCAAACCCTCCTGCGCCGGCGAATCCACCACCAGCATCAGCGCTTCCTCCGTCTA TTCCGACCTAGAGCCATGGCTGAAGAACGGGAGCTACAGCTTCCTCACCAATGACGAGCTCCTCAAGCTCAAAACCCTCCAGGACTTCCGGTACCGAGCT GAATTGGAAACCGGATCGATCTCCGTCAGGGTAATGCGGCCGGAGGAGACCGATTCGACTGTCGGATTGCTCGCCGTCTCGTTCGTGGAGTCCATGAAGC TTCCCGATTGGTACTTGACTTTGATTAGCTTCTTGGTGAAACAGTACTTGATTGAGCGGCGAGCTGCGATTCCGAATGCCGTTACTCTTCTAGGGTTCTA TAAACGGAAAGAAGACGGCATAGACGGCGACGAGGAAGATGAAGATGAAGGGGAGTTAGCAGGGACGGTGGAGGTTAGTTTCAATAAGAAAGGAGTGAGT GATTCTCCTCCGACGCCTACGCATCCCAAGGACTCTCCTTACATCTCCAACATGACTGTTAACAAGCCATTTCGAAGTAGCATTCATGAGATCTGCATTG TTGCTAGGCCTAGGTTTATGGATTTGACGGAAACCTGCTTGATATCTTACCGAATGTATTTTGAAACTTACAGGAGGCGGATTGGTTGGAATCTTTTGAA AGCAAGTGAGGAGCTGATCTCTCAAGTGAGTGGTGTGAGAGAGGCGTATCTGCACTGTAGGATGATTGATTCGGCACCGTTTAACATGTACATAAAAGCA GGCTACGATGTTGTTAAGACGGATAGCATACTCGTATTGTTGCTGTTGCAACCTCGCAAGCATTTGATGTTGAAGAAGCTTCCAGCACCGACAAGCAGCG AGGACTTGGAGCTTCATGTTTCTGGTTCTGAGCTGGAACAAGTGGAAGTCGGATCATGA
AA sequence Show only first row Show all	>Lus10030649 pacid=23140545 polypeptide=Lus10030649 locus=Lus10030649.g ID=Lus10030649.BGIv1.0 annot-version=v1.0 MAAAATLSLSLTPTSSSDTLLPSSRHRPRFLLPHHFSISHPSRFRRLIPKPSCAGESTTSISASSVYSDLEPWLKNGSYSFLTNDELLKLKTLQDFRYRA ELETGSISVRVMRPEETDSTVGLLAVSFVESMKLPDWYLTLISFLVKQYLIERRAAIPNAVTLLGFYKRKEDGIDGDEEDEDEGELAGTVEVSFNKKGVS DSPPTPTHPKDSPYISNMTVNKPFRSSIHEICIVARPRFMDLTETCLISYRMYFETYRRRIGWNLLKASEELISQVSGVREAYLHCRMIDSAPFNMYIKA GYDVVKTDSILVLLLLQPRKHLMLKKLPAPTSSEDLELHVSGSELEQVEVGS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24040			Acyl-CoA N-acyltransferases (N...		Lus10030649 [exp]	0	1
AT5G61760		ATIPK2BETA	ARABIDOPSIS THALIANA INOSITOL ...		Lus10020535 [exp]	1.0	0.9094
AT5G37980			Zinc-binding dehydrogenase fam...		Lus10040177 [exp]	3.2	0.8979
AT2G46420			Plant protein 1589 of unknown ...		Lus10030264 [exp]	4.5	0.8889
AT1G53470		MSL4	mechanosensitive channel of sm...		Lus10013692 [exp]	6.0	0.8743
AT4G00370		PHT4;4, ANTR2	anion transporter 2, Major fac...		Lus10036366 [exp]	6.2	0.8922
AT1G66150		TMK1	transmembrane kinase 1 (.1)		Lus10016952 [exp]	6.2	0.8659
AT3G62630			Protein of unknown function (D...		Lus10020690 [exp]	6.5	0.8580
AT3G62630			Protein of unknown function (D...		Lus10029855 [exp]	6.5	0.8648
AT2G18940			Tetratricopeptide repeat (TPR)...		Lus10020002 [exp]	6.9	0.8917
AT2G18940			Tetratricopeptide repeat (TPR)...		Lus10015530 [exp]	9.2	0.8842

Compare expression of checked genes

Lus10030649 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.