Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G35300 805 / 0 TMT2 tonoplast monosaccharide transporter2 (.1.2.3.4.5) AT1G20840 751 / 0 AtTMT1, TMT1 tonoplast monosaccharide transporter1 (.1) AT3G51490 728 / 0 TMT3 tonoplast monosaccharide transporter3 (.1.2) AT3G18830 124 / 2e-29 ATPMT5, AtPLT5 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) AT1G30220 120 / 2e-28 ATINT2 ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2, inositol transporter 2 (.1) AT2G35740 119 / 4e-28 ATINT3 nositol transporter 3 (.1) AT4G16480 114 / 2e-26 ATINT4 inositol transporter 4 (.1) AT2G16120 111 / 1e-25 ATPMT1, AtPLT1 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 1, polyol/monosaccharide transporter 1 (.1) AT2G16130 111 / 2e-25 ATPMT2, AtPLT2 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 2, polyol/monosaccharide transporter 2 (.1) AT4G36670 110 / 3e-25 AtPMT6, AtPLT6 polyol/monosaccharide transporter 6, polyol transporter 6, Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013208 [exp] 1162 / 0 AT4G35300 954 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Lus10022988 [exp] 870 / 0 AT4G35300 1095 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Lus10001386 [exp] 850 / 0 AT4G35300 1074 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Lus10001385 [exp] 847 / 0 AT4G35300 1071 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Lus10022989 [exp] 750 / 0 AT4G35300 977 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Lus10012709 [exp] 664 / 0 AT3G51490 818 / 0.0 tonoplast monosaccharide transporter3 (.1.2) Lus10010886 [exp] 656 / 0 AT3G51490 822 / 0.0 tonoplast monosaccharide transporter3 (.1.2) Lus10017561 [exp] 124 / 1e-29 AT4G16480 820 / 0.0 inositol transporter 4 (.1) Lus10010500 [exp] 124 / 3e-29 AT4G16480 823 / 0.0 inositol transporter 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G006200 [exp] 954 / 0 AT4G35300 904 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Potri.005G255400 [exp] 952 / 0 AT4G35300 915 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Potri.009G168500 [exp] 853 / 0 AT4G35300 934 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Potri.004G207100 [exp] 848 / 0 AT4G35300 965 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Potri.005G098900 [exp] 752 / 0 AT4G35300 759 / 0.0 tonoplast monosaccharide transporter2 (.1.2.3.4.5) Potri.004G151725 [exp] 127 / 1e-30 AT3G18830 640 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.004G152300 [exp] 124 / 7e-30 AT3G18830 625 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.006G015300 [exp] 123 / 3e-29 AT4G16480 788 / 0.0 inositol transporter 4 (.1) Potri.009G113600 [exp] 116 / 5e-27 AT3G18830 717 / 0.0 ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5, POLYOL TRANSPORTER 5, polyol/monosaccharide transporter 5 (.1) Potri.006G015200 [exp] 115 / 1e-26 AT4G16480 811 / 0.0 inositol transporter 4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF00083 [flax] [poplar] Sugar_tr Sugar (and other) transporter
Representative CDS sequence Show only first row Show all	>Lus10030726 pacid=23155317 polypeptide=Lus10030726 locus=Lus10030726.g ID=Lus10030726.BGIv1.0 annot-version=v1.0 ATGAACGGAGCAGCACTCGTCGCTATCGCCGCTTGTATTGGCAATTTCTTGCAAGGATGGGATAATGCTACAATTGCTGGAGCAATTGTGTATATAAAGA AGGATCTAGCTTTAGACAGCAGTGTGGAAGGACTTGTTGTGGCCATGTCACTAATTGGCGCCACGGCAATCACAACATGTTCTGGACCGATTTCGGATTG GCTCGGTCGAAGGCCAGTGCTGATCATTTCATCAGTTCTCTACTTCTTAGGTGGACTTGTAATGCTCTGGTCTCCCAATGTGTATGTGTTGTGTTTGGCT AGGCTGCTGGATGGATTTGGGATTGGCTTGGCTGTGACTCTTGTCCCGCTCTACATATCCGAGACTGCACCTTCCGATATAAGAGGGCAGCTGAACACGC TCCCTCAGTTCACTGGCTCAGCGGGCATGTTCTTGTCGTACTGTATGGTCTTCGGGATGTCGTTGTTGCCTTCCCCGAGTTGGAAGTTGATGCTCGGGGT TCTGTCACTTCCCTCGCTGCTGTACTTTGCGTTGACTGTGTTTTACTTGCCTGAATCTCCTCGTTGGCTCGTTAGCAAAGGCAAAATGCTCGAGGCCAGA CGAGTTCTCCAGCGACTTAGGGGAGTTGAGGATGTTTCAGGTGAGTTAGCTTTGCTAGTAGAAGGCCTTGGCCTCGGAGGAGAGACATCTATAGAAGATT ATGTAATAGGTCCAGGAGATGAAATTGCTGATGATAATCAGGTATTTGATTCTGACAAAGACAGAATCAGACTATACGGCCCTGAGCAGGGCCAGTCGTG GGTTGCTAAGCCAGCAACCCGTCGACAAAGTTCACTAGCTCTTGCGTCTCGACAAGGGAGCATGGTAAGCCACAATGTGCCTCTAATGGACCCTCTAGTG ACTCTTTTCGGCAGTGTCCACGAAAAGTTCCCTGAGTCAGGAAGCATGAGAAGCATGATCTTCCCAACTTTTGGTAGCATGTTTAGTACAGCGGACCCCC CAACGAAGCATGATCATTGGGACGAAGAGAGCCTACATGGAGAAGGTGAAGGCTATGGATCAGATGATGCTAGCGGTGGAGAAGATTCCGGAGATGATCA TGATCAGCTGCATAGTCCTTTGATAACCCATGGCAGTAACTTGGGTAGTATAAGACACAATAGCAGTCTATTCAATGGTGAGACAGTTGGAAGCACTGGG ATCGGCGGTGGGTGGCAGTTGGCGTGGCAGTGGGCCGAGAACGAAGGTGAGGGCGGGAAGAAAGAAGGAGGGTTTAAAAGGGTATACTTGCACCAGGAAG GAGGAGGTGCTGGAACTCGACGAGGTTCCATTGTGTCGATTCATGGTGGTGAAGTGCAAGGAGATGGTGGTGATTATGTTCAGGCCGCTGCTCTTGTAAG CCAGCCAGCTCTCTATTCCAAAGCTCTCATAGAGCAGCATCCAGTTGGTCCTGCAATGGTTCATCCATCTGAGACTGCTGGTAAAGGCCCGGTTTGGGCT GCTTTACTTGATCCTGGAGTTAAGAGTGCTCTGATCGTTGGGATGGGAATTCAGATTCTTCAGCAGTTTTCTGGTATAAATGGTGTTCTGTACTATACAC CTCAAATTCTTCAAGAAGCAGGAGTTGGAGTTTTACTTGCAAACTTAGGCATCAGTTCAGAGTCCTCATCTTTCCTCATCAGTGCATTCACTACCTTGCT GATGCTTCCTTGCATTGGCGTTGCCATGCGCCTCATGGATATCTCAGGCAGAAGATCATTGTTGCTCGCCACGATCCCGGTGCTTATTTTCTCGCTCATC ATCCTAGTCGTCAGCAGACTCGTCGAGCTTTCTTCTGTCGTCAATGCAATCATCTCCACGGCTTGTGTCATCGTCTACTTCTGCTGCTTCGTTGCGGCCT ATGGTCCCATCCCGAACATCCTATGCGCCGAGATATTCCCTACGAGAGTACGAGGCCTGTGCATCGCGATCTGCGCATTGGTTTTCTGGGTCGGAGACAT CATCGTCACCTACACCCTGCCTGTGATGCTGAGTTCGATAGGTCTTGGCGGTGCATTCGGCATTTATGCAGTCGTTTGTGTCATTTCTTGGGTGTTTGTG TTCTTGAAGGTCCCCGAGACCAAAGGCATGCCTCTTGAAGTCATCACCGAGTTCTTCGCTGTCGGGGCCAGACAAGCCGCGGCTGCCAAAAACGAGTGA
AA sequence Show only first row Show all	>Lus10030726 pacid=23155317 polypeptide=Lus10030726 locus=Lus10030726.g ID=Lus10030726.BGIv1.0 annot-version=v1.0 MNGAALVAIAACIGNFLQGWDNATIAGAIVYIKKDLALDSSVEGLVVAMSLIGATAITTCSGPISDWLGRRPVLIISSVLYFLGGLVMLWSPNVYVLCLA RLLDGFGIGLAVTLVPLYISETAPSDIRGQLNTLPQFTGSAGMFLSYCMVFGMSLLPSPSWKLMLGVLSLPSLLYFALTVFYLPESPRWLVSKGKMLEAR RVLQRLRGVEDVSGELALLVEGLGLGGETSIEDYVIGPGDEIADDNQVFDSDKDRIRLYGPEQGQSWVAKPATRRQSSLALASRQGSMVSHNVPLMDPLV TLFGSVHEKFPESGSMRSMIFPTFGSMFSTADPPTKHDHWDEESLHGEGEGYGSDDASGGEDSGDDHDQLHSPLITHGSNLGSIRHNSSLFNGETVGSTG IGGGWQLAWQWAENEGEGGKKEGGFKRVYLHQEGGGAGTRRGSIVSIHGGEVQGDGGDYVQAAALVSQPALYSKALIEQHPVGPAMVHPSETAGKGPVWA ALLDPGVKSALIVGMGIQILQQFSGINGVLYYTPQILQEAGVGVLLANLGISSESSSFLISAFTTLLMLPCIGVAMRLMDISGRRSLLLATIPVLIFSLI ILVVSRLVELSSVVNAIISTACVIVYFCCFVAAYGPIPNILCAEIFPTRVRGLCIAICALVFWVGDIIVTYTLPVMLSSIGLGGAFGIYAVVCVISWVFV FLKVPETKGMPLEVITEFFAVGARQAAAAKNE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G35300		TMT2	tonoplast monosaccharide trans...		Lus10030726 [exp]	0	1
AT1G80530			Major facilitator superfamily ...		Lus10041962 [exp]	1.7	0.9108
AT3G23110		EMB2800, AtRLP3...	EMBRYO DEFECTIVE 2800, recepto...		Lus10032335 [exp]	4.6	0.8798
AT1G30620		MURUS4, HSR8, U...	UDP-D-XYLOSE 4-EPIMERASE 1, MU...		Lus10038423 [exp]	5.3	0.8892
AT1G80530			Major facilitator superfamily ...		Lus10017971 [exp]	5.5	0.8913
AT5G15740		RRT1	O-fucosyltransferase family pr...		Lus10034651 [exp]	5.7	0.8933
AT4G33010		ATGLDP1	glycine decarboxylase P-protei...		Lus10026429 [exp]	6.0	0.8787
AT5G65720		ATNIFS1, NIFS1 ...	NITROGEN FIXATION S HOMOLOG 1,...		Lus10011572 [exp]	6.3	0.8831
AT5G58970		ATUCP2	uncoupling protein 2 (.1.2)		Lus10040709 [exp]	6.9	0.8831
AT2G22730			Major facilitator superfamily ...		Lus10019244 [exp]	14.6	0.8258
AT4G15530		PPDK	pyruvate orthophosphate dikina...		Lus10034005 [exp]	18.3	0.8667

Compare expression of checked genes

Lus10030726 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.