Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24095 217 / 1e-71 Putative thiol-disulphide oxidoreductase DCC (.1) AT1G52590 72 / 1e-15 Putative thiol-disulphide oxidoreductase DCC (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030653 [exp] 246 / 1e-83 AT1G24095 229 / 2e-77 Putative thiol-disulphide oxidoreductase DCC (.1) Lus10036091 [exp] 77 / 3e-17 AT1G52590 232 / 8e-79 Putative thiol-disulphide oxidoreductase DCC (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G147000 [exp] 227 / 2e-75 AT1G24095 216 / 3e-71 Putative thiol-disulphide oxidoreductase DCC (.1) Potri.008G213200 [exp] 67 / 8e-14 AT1G52590 222 / 5e-75 Putative thiol-disulphide oxidoreductase DCC (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04134 [flax] [poplar] DUF393 Protein of unknown function, DUF393
Representative CDS sequence Show only first row Show all	>Lus10030833 pacid=23155293 polypeptide=Lus10030833 locus=Lus10030833.g ID=Lus10030833.BGIv1.0 annot-version=v1.0 ATGATGGCCAGAATGTTGCTTAGGCGGCTCCGCTGCATCTCCTCACTTCCACAGCCGCCATTGAAGAAGCTCTCGCAATTCTCATCGTCTTCTGCTACTT CCTTGCCTAAGGTTCCCGCCGCGTCGATCTCAAAAGCTACAGCGGCAGCTTCAGTTGCCGACGTTGTGGAAGACGAAGAGGAGCTTCTTGAATCGGTCGC GTATGTATCTCCGGCGACCTTACCCTCGCTTCTACAGCCTCGCGTCGTAGTTTACGACGGCGTATGCCACCTCTGCCACGGAGGGGTGAAGTGGATAATT CAAGTGGACAAGCACAAGAAGATCAAATTCTGCTGTCTTCAGTCTCAAGCAGCTGAACCATACCTGAGGTTGTGTGGTCTTGAGAGAGACGATGTCCTTC GTCGCTTTCTCTTCGTCGAAGGGCCAGGTCAATACCACCAAGCATCCACTGCTGCTCTGAAAGTGCTATCCTACCTGCCTCTCCCATACTCTGCTTTGAG TTCGCTCATGATTGTTCCGACTCCGATCAGAGATGAAGTGTACGACCATGTGGCCAAGAGACGCTACGACTGGTTCGGGAAGGCGGATCGTTGCTTGGTG TTGGATGACAAAGAGTTGCTGGATCGATTCATTGACAAGGATGAAATGCTGGATGAGTAG
AA sequence Show only first row Show all	>Lus10030833 pacid=23155293 polypeptide=Lus10030833 locus=Lus10030833.g ID=Lus10030833.BGIv1.0 annot-version=v1.0 MMARMLLRRLRCISSLPQPPLKKLSQFSSSSATSLPKVPAASISKATAAASVADVVEDEEELLESVAYVSPATLPSLLQPRVVVYDGVCHLCHGGVKWII QVDKHKKIKFCCLQSQAAEPYLRLCGLERDDVLRRFLFVEGPGQYHQASTAALKVLSYLPLPYSALSSLMIVPTPIRDEVYDHVAKRRYDWFGKADRCLV LDDKELLDRFIDKDEMLDE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24095			Putative thiol-disulphide oxid...		Lus10030833 [exp]	0	1
AT1G75440		UBC16	ubiquitin-conjugating enzyme 1...		Lus10041791 [exp]	9.5	0.8275
AT2G23320	WRKY	WRKY15	WRKY DNA-binding protein 15 (....		Lus10006261 [exp]	9.8	0.8279
AT2G44180		MAP2A	methionine aminopeptidase 2A (...		Lus10000403 [exp]	16.5	0.8462
AT5G05700		ATATE1, DLS1, A...	DELAYED LEAF SENESCENCE 1, arg...		Lus10004392 [exp]	20.4	0.8188
AT4G11170			Disease resistance protein (TI...		Lus10007822 [exp]	22.7	0.8282
AT3G53500		RSZ32, RS2Z32, ...	arginine/serine-rich zinc knuc...		Lus10025280 [exp]	23.2	0.8426
AT1G34320			Protein of unknown function (D...		Lus10017136 [exp]	31.1	0.8306
AT3G57620			glyoxal oxidase-related protei...		Lus10015949 [exp]	56.4	0.7874
AT1G19270		DA1	DA1 (.1)		Lus10018789 [exp]	61.1	0.8146
AT1G69550			disease resistance protein (TI...		Lus10007827 [exp]	62.3	0.7942

Compare expression of checked genes

Lus10030833 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.