Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10030608 [exp] 218 / 1e-71 AT1G23530 70 / 7e-15 unknown protein Lus10013015 [exp] 39 / 0.001 AT1G23530 51 / 4e-08 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10030881 pacid=23155359 polypeptide=Lus10030881 locus=Lus10030881.g ID=Lus10030881.BGIv1.0 annot-version=v1.0 ATGTTTGTTATTCTTCATTTCCAAGTTCGATCAACTGTTTCCAAATGGAGTGAAGCTTATCAGTTGAGACATGTACCGATTTGTGTGAACTTTGACAAAG AATTGTATCATGGTATCTGCTTAGAAGCTCTTGAATTGATCATCGTGGTCTCGGGGCTAGCCTGCTGCCTCGGCCGGCTGTGCAACAGGCAACAACTCAA GAAGGATAGAAAGGATAGTCATAAGAGCAGCAAGAAGAGCAAAAACCAACACAGCTCGAAGGTGGGCCAGGGTGATGATATCGAGTTTGGGCTTCCACCT CCAATGTTTGGAAGGCCCATGGAGGGAGAGCGTGAAGGGCCTGTTGGGCCTCGTCAGAAGCAGCCCGGTGAGGGTAATAGTGGGCCGTATAATCCTTATG CCCCTTCTCCTTCTCAACAGAAGGATGAGCATGGAGAGCATGGAGGAGGTATGAACATTATGAAGATGATGAATGGTGGTGAGCAGAAGAGAGGGTTTAG TAATGGTGGTAAGTGCGATCCTCGTTCGAAAGGCGGTGAGAAGTTAAACCACACGGTCATGGAGTTTCAGGAAGAAGAGCCTCGTCCGAGTATTAAGATC AGGGATCGACAAACGACTGGGATTTCTTTATACTCTAGTGATGGAAGTATTGAGAATTGCTACACATAG
AA sequence Show only first row Show all	>Lus10030881 pacid=23155359 polypeptide=Lus10030881 locus=Lus10030881.g ID=Lus10030881.BGIv1.0 annot-version=v1.0 MFVILHFQVRSTVSKWSEAYQLRHVPICVNFDKELYHGICLEALELIIVVSGLACCLGRLCNRQQLKKDRKDSHKSSKKSKNQHSSKVGQGDDIEFGLPP PMFGRPMEGEREGPVGPRQKQPGEGNSGPYNPYAPSPSQQKDEHGEHGGGMNIMKMMNGGEQKRGFSNGGKCDPRSKGGEKLNHTVMEFQEEEPRPSIKI RDRQTTGISLYSSDGSIENCYT

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10030881 [exp]	0	1
AT1G18080		RACK1A_AT, ATAR...	RECEPTOR FOR ACTIVATED C KINAS...		Lus10017570 [exp]	6.6	0.8509
AT3G18190			TCP-1/cpn60 chaperonin family ...		Lus10026151 [exp]	13.9	0.8557
AT4G12130			Glycine cleavage T-protein fam...		Lus10024566 [exp]	16.9	0.7374
AT5G03070		IMPA-9	importin alpha isoform 9 (.1)		Lus10008480 [exp]	23.5	0.8010
AT2G04390			Ribosomal S17 family protein (...		Lus10029412 [exp]	26.3	0.8455
AT4G26810			SWIB/MDM2 domain superfamily p...		Lus10038799 [exp]	28.5	0.7964
AT3G19760		EIF4A-III	eukaryotic initiation factor 4...		Lus10010206 [exp]	34.0	0.7507
AT3G19760		EIF4A-III	eukaryotic initiation factor 4...		Lus10017407 [exp]	36.0	0.7785
AT4G36130			Ribosomal protein L2 family (....		Lus10025966 [exp]	39.0	0.8034
AT1G07210			Ribosomal protein S18 (.1)		Lus10038756 [exp]	41.0	0.7951

Compare expression of checked genes

Lus10030881 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.