Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G51700 288 / 9e-100 ATRAR1, RPR2, PBS2 Required for Mla12 resistance 1, PPHB SUSCEPTIBLE 2, protein binding;zinc ion binding (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031688 [exp] 407 / 1e-146 AT5G51700 286 / 7e-99 Required for Mla12 resistance 1, PPHB SUSCEPTIBLE 2, protein binding;zinc ion binding (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G132300 [exp] 318 / 2e-111 AT5G51700 290 / 3e-100 Required for Mla12 resistance 1, PPHB SUSCEPTIBLE 2, protein binding;zinc ion binding (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04968 [flax] [poplar] CHORD CHORD
Representative CDS sequence Show only first row Show all	>Lus10031107 pacid=23151088 polypeptide=Lus10031107 locus=Lus10031107.g ID=Lus10031107.BGIv1.0 annot-version=v1.0 ATGGCGGACGGCGGCAGACTGCGGTGCCAGAGGATCGGCTGCGACGCCACGTTCACCGAGGACGACAATCCTGAAGGTTCTTGTCAGTATCACGAATCGC CCAAATTCCATGATGGAATGAAAGAATGGAGTTGTTGCAAAAAGAAAAGCCACGATTTCAGCTTATTTCTGGAGATACCAGGATGCAAGACAGGGAAACA TACTACTGAGAAGCCAGCATTGCCAAACGTGACTGCAACTCCCAAAGCACCAATCTCTAAACCCTCCATATCCATGCCTTCTACGACTAATGCACCCTCG AGAGAAGCTTGTCCTAGATGCAAGCAGGGGTTCTTTTGCTCCGATCACGGTTCACAGACTACATCAGCTGCACCTGCTATAAGCAATGCAGAGATTCCAG CACCAGCTACGGTGAAGAAGAGAATCGACATAAACGAGCCCCAAACCTGCAAGAACAAAAGCTGTGGCAAAACATTCAAAGAAAAGGACAACCACGACAC AGCATGCAGCTACCATCCAGGGCCTGCAGTCTTCCACGACAGGAACAAAGGGTGGCAGTGTTGCGATATCCACGTGAAGGAGTTCGACGAGTTCATGGAC ATTCCTCCTTGCTCGAAAGGATGGCACAATGCCGATCCAAGCTCTTGA
AA sequence Show only first row Show all	>Lus10031107 pacid=23151088 polypeptide=Lus10031107 locus=Lus10031107.g ID=Lus10031107.BGIv1.0 annot-version=v1.0 MADGGRLRCQRIGCDATFTEDDNPEGSCQYHESPKFHDGMKEWSCCKKKSHDFSLFLEIPGCKTGKHTTEKPALPNVTATPKAPISKPSISMPSTTNAPS REACPRCKQGFFCSDHGSQTTSAAPAISNAEIPAPATVKKRIDINEPQTCKNKSCGKTFKEKDNHDTACSYHPGPAVFHDRNKGWQCCDIHVKEFDEFMD IPPCSKGWHNADPSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G51700		ATRAR1, RPR2, P...	Required for Mla12 resistance ...		Lus10031107 [exp]	0	1
AT5G47550			Cystatin/monellin superfamily ...		Lus10010495 [exp]	2.0	0.9187
AT1G63380			NAD(P)-binding Rossmann-fold s...		Lus10007038 [exp]	5.9	0.9313
AT3G47570			Leucine-rich repeat protein ki...		Lus10010199 [exp]	12.2	0.9075
AT5G27600		LACS7, ATLACS7	long-chain acyl-CoA synthetase...		Lus10029918 [exp]	14.4	0.9111
AT1G78780			pathogenesis-related family pr...		Lus10039018 [exp]	14.5	0.9089
AT1G66540			Cytochrome P450 superfamily pr...		Lus10032856 [exp]	15.0	0.9034
AT5G46840			RNA-binding (RRM/RBD/RNP motif...		Lus10004563 [exp]	15.5	0.9006
AT3G51610		NPU	NO PRIMEXINE AND PLASMA MEMBRA...		Lus10006096 [exp]	15.9	0.8629
AT4G33740			unknown protein		Lus10020507 [exp]	15.9	0.9107
AT5G35370			S-locus lectin protein kinase ...		Lus10025618 [exp]	16.7	0.9077

Compare expression of checked genes

Lus10031107 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.