Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G23945 60 / 4e-10 Eukaryotic aspartyl protease family protein (.1) AT4G30030 53 / 5e-08 Eukaryotic aspartyl protease family protein (.1) AT2G03200 53 / 6e-08 Eukaryotic aspartyl protease family protein (.1) AT4G30040 50 / 8e-07 Eukaryotic aspartyl protease family protein (.1) AT2G36670 49 / 1e-06 Eukaryotic aspartyl protease family protein (.1.2) AT4G12920 42 / 0.0002 UND UNDEAD, Eukaryotic aspartyl protease family protein (.1) AT1G31450 42 / 0.0003 Eukaryotic aspartyl protease family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031113 [exp] 114 / 5e-29 AT2G23945 137 / 9e-36 Eukaryotic aspartyl protease family protein (.1) Lus10011615 [exp] 72 / 3e-14 AT2G23945 224 / 5e-68 Eukaryotic aspartyl protease family protein (.1) Lus10023451 [exp] 69 / 2e-13 AT2G23945 232 / 2e-71 Eukaryotic aspartyl protease family protein (.1) Lus10015486 [exp] 66 / 5e-12 AT2G23945 248 / 3e-76 Eukaryotic aspartyl protease family protein (.1) Lus10031449 [exp] 63 / 4e-11 AT2G23945 219 / 3e-66 Eukaryotic aspartyl protease family protein (.1) Lus10002275 [exp] 61 / 1e-10 AT2G23945 164 / 7e-46 Eukaryotic aspartyl protease family protein (.1) Lus10031450 [exp] 60 / 3e-10 AT4G30030 231 / 2e-71 Eukaryotic aspartyl protease family protein (.1) Lus10002276 [exp] 57 / 4e-09 AT2G23945 206 / 2e-61 Eukaryotic aspartyl protease family protein (.1) Lus10020425 [exp] 49 / 6e-07 AT2G23945 144 / 6e-41 Eukaryotic aspartyl protease family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G179500 [exp] 85 / 7e-19 AT2G23945 412 / 3e-141 Eukaryotic aspartyl protease family protein (.1) Potri.019G002100 [exp] 50 / 4e-07 AT2G03200 529 / 0.0 Eukaryotic aspartyl protease family protein (.1) Potri.003G087900 [exp] 50 / 5e-07 AT5G33340 430 / 8e-149 CONSTITUTIVE DISEASE RESISTANCE 1, Eukaryotic aspartyl protease family protein (.1) Potri.018G106500 [exp] 50 / 7e-07 AT4G30030 150 / 2e-41 Eukaryotic aspartyl protease family protein (.1) Potri.018G014800 [exp] 46 / 1e-05 AT5G10770 312 / 9e-102 Eukaryotic aspartyl protease family protein (.1) Potri.001G306200 [exp] 45 / 3e-05 AT2G03200 501 / 1e-176 Eukaryotic aspartyl protease family protein (.1) Potri.014G114400 [exp] 44 / 6e-05 AT5G33340 475 / 1e-166 CONSTITUTIVE DISEASE RESISTANCE 1, Eukaryotic aspartyl protease family protein (.1) Potri.014G020200 [exp] 44 / 7e-05 AT5G43100 807 / 0.0 Eukaryotic aspartyl protease family protein (.1) Potri.002G104600 [exp] 43 / 0.0001 AT1G09750 531 / 0.0 Eukaryotic aspartyl protease family protein (.1) Potri.006G232600 [exp] 42 / 0.0002 AT5G10770 438 / 1e-150 Eukaryotic aspartyl protease family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10031207 pacid=23151008 polypeptide=Lus10031207 locus=Lus10031207.g ID=Lus10031207.BGIv1.0 annot-version=v1.0 ATGTCTTCTTCTTCAATCCTTCTGTTCTTCCTCATTGTCCTCATTCCTTGCACCCAAACCGTCTCTGTTCCTATCGTCACGAGACTTATACATCGTGATT CTGTCCACTCTCCTCTTTATGATCCTACCGAGACTGAAATCGATCGCTTCAACCGCCTAACCAACGTTTCGGCTGCTTTGCTTCTTCATATGTACAACAG CTCAAAATCAGATGATGGGTGTTGTTTTCCTAGTGAACTGATCCGAAGCCGCATGGAACGGGTTTTCTTTGTCGAATTCGAAATGGGTTCATCATTGGCC AAACTATATACAAGTCTTCCGTTTTCACAATGCACAGATAGACGTTCATGCCGCTATTGGAAGAGGTATGCCGATGGCACCGAGTCAACCGGAAGGATTG CCACGAACGACATTTTCTTATCGGATGATGAGTTCGAATACTCAATTAAAGATGTGCCATTCGGATGCTCTGAAGTAACCTCCGGGGGTCCCGAAAAGGA AGAAAAATATTCGGGGGTATTCGGTTTGGGTCCTGGACCAGTATCGCAGGTGAAGAATGCAGTGTTCACATACTGCCTAGGTGATCTAAGCCACCACAAG AATTACTATTCTCACTACCTCGTCCTCATGGACGACGTGGAAATAGTTGTGAAGAGAGATGGTATTTTTATCCAGAAAGCTTATTTCAAGTCCGACGGGA GACATTACATTCTCAACTTGAAATGGATTAGATTTTGA
AA sequence Show only first row Show all	>Lus10031207 pacid=23151008 polypeptide=Lus10031207 locus=Lus10031207.g ID=Lus10031207.BGIv1.0 annot-version=v1.0 MSSSSILLFFLIVLIPCTQTVSVPIVTRLIHRDSVHSPLYDPTETEIDRFNRLTNVSAALLLHMYNSSKSDDGCCFPSELIRSRMERVFFVEFEMGSSLA KLYTSLPFSQCTDRRSCRYWKRYADGTESTGRIATNDIFLSDDEFEYSIKDVPFGCSEVTSGGPEKEEKYSGVFGLGPGPVSQVKNAVFTYCLGDLSHHK NYYSHYLVLMDDVEIVVKRDGIFIQKAYFKSDGRHYILNLKWIRF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G23945			Eukaryotic aspartyl protease f...		Lus10031207 [exp]	0	1

Compare expression of checked genes

Lus10031207 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.