Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13490 544 / 0 AAC2 ADP/ATP carrier 2 (.1.2) AT3G08580 535 / 0 AAC1 ADP/ATP carrier 1 (.1.2) AT4G28390 483 / 2e-171 ATAAC3, AAC3 ADP/ATP carrier 3 (.1) AT5G17400 333 / 2e-113 ER-ANT1 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) AT5G56450 192 / 3e-58 PM-ANT Mitochondrial substrate carrier family protein (.1) AT4G26180 120 / 5e-31 Mitochondrial substrate carrier family protein (.1) AT3G55640 111 / 2e-27 Mitochondrial substrate carrier family protein (.1) AT2G37890 105 / 2e-25 Mitochondrial substrate carrier family protein (.1) AT3G53940 103 / 2e-24 Mitochondrial substrate carrier family protein (.1) AT4G01100 102 / 2e-24 ADNT1 adenine nucleotide transporter 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031843 [exp] 641 / 0 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016418 [exp] 538 / 0 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10019702 [exp] 535 / 0 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10019701 [exp] 533 / 0 AT5G13490 607 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016417 [exp] 530 / 0 AT5G13490 602 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10039847 [exp] 492 / 5e-175 AT4G28390 545 / 0.0 ADP/ATP carrier 3 (.1) Lus10034658 [exp] 320 / 2e-108 AT5G17400 491 / 5e-177 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10017874 [exp] 311 / 6e-105 AT5G17400 473 / 5e-170 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10018612 [exp] 263 / 1e-87 AT5G13490 301 / 1e-102 ADP/ATP carrier 2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G204600 [exp] 555 / 0 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G019400 [exp] 555 / 0 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.009G062200 [exp] 546 / 0 AT5G13490 625 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G267800 [exp] 543 / 0 AT3G08580 592 / 0.0 ADP/ATP carrier 1 (.1.2) Potri.007G139100 [exp] 501 / 1e-178 AT4G28390 572 / 0.0 ADP/ATP carrier 3 (.1) Potri.017G012800 [exp] 501 / 2e-178 AT4G28390 575 / 0.0 ADP/ATP carrier 3 (.1) Potri.012G062500 [exp] 310 / 3e-104 AT5G17400 416 / 5e-147 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Potri.006G227100 [exp] 200 / 3e-61 AT5G56450 462 / 4e-165 Mitochondrial substrate carrier family protein (.1) Potri.006G153600 [exp] 110 / 2e-27 AT4G26180 475 / 4e-170 Mitochondrial substrate carrier family protein (.1) Potri.006G226300 [exp] 107 / 5e-26 AT1G14560 476 / 7e-170 Mitochondrial substrate carrier family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10031276 pacid=23151117 polypeptide=Lus10031276 locus=Lus10031276.g ID=Lus10031276.BGIv1.0 annot-version=v1.0 ATGTCTGATCATCAGCATCAACAACTATCAAAGATAGTCCAGAGGATGAAAACAACCTCCAAGCTCCCACAAGACATCCAGCACAGATCATATGGCGGCA GCATCATCGTCCCAGGGAGGGATTTCGCGTATGGAAACTACACGAACCCCGCGTTTTCGATCCTGGCTGCCACTACAACCTCGAGGGCACCACAGCCCGT GGTTGTTCAGGCCCCATCAGAGAAAGGGCTTGCGGGTTTCGCAACCGATTTCATGATGGGTGGGGTCTCTGCGGCAGTTTCCAAAACTGCTGCAGCTCCC ATCGAGCGTGTGAAGCTGCTGATCCAGAATCAGGACGAGATGATCAAGGCCGGAAGGCTCTCGGAGCCTTACAGGGGGATTGGTGACTGTTTCTCTAGGA CCATGAAGGATGAAGGCATGATGTCCCTGTGGAGAGGGAACACTGCTAATGTCATTCGTTATTTCCCCACTCAGGCACTGAACTTCGCCTTCAAGGACTA CTTCAAGAGGCTGTTCAACTTCAAGAAGGACAGAGACGGCTACTGGAAGTGGTTTGCAGGGAACTTGGCATCCGGTGGAGCAGCCGGTGCTTCTTCGCTC TTTTTCGTGTATTCGCTTGACTATGCTCGAACCAGGCTCGCCAACGATGCCAAGGCTGCCAAGAAAGGAGGTGGCGGGAGGCAGTTCAACGGGCTCTTCG ATGTCTACAAGAAGACAATGCAGAGTGATGGCATTGCCGGCCTTTACCGTGGCTTCAACATCTCTTGTGTTGGCATCATTGTCTACCGTGGTCTCTACTT TGGCATGTATGACTCCCTCAAGCCGGTCGTCCTCACCGGAAATCTTCAAGATAGCTTCTTTGCAAGCTTTGCACTCGGTTGGCTGATCACAAACGGCGCC GGATTAGCTTCGTACCCAATTGACACCGTCCGGAGAAGAATGATGATGACCTCCGGCGAAGCGGTGAAGTACAGCAGCTCCATGGACGCATTCTCCCAGA TCCTCAAGAACGAAGGTGCCAAGTCACTCTTCAAGGGCGCCGGAGCCAACATCCTCCGGGCCGTCGCCGGAGCTGGTGTCCTCGCCGGATACGACAAGCT GCAGGTGATCGTGTTCGGGAAGAAGTACGGCTCCGGTGGGGCTTAA
AA sequence Show only first row Show all	>Lus10031276 pacid=23151117 polypeptide=Lus10031276 locus=Lus10031276.g ID=Lus10031276.BGIv1.0 annot-version=v1.0 MSDHQHQQLSKIVQRMKTTSKLPQDIQHRSYGGSIIVPGRDFAYGNYTNPAFSILAATTTSRAPQPVVVQAPSEKGLAGFATDFMMGGVSAAVSKTAAAP IERVKLLIQNQDEMIKAGRLSEPYRGIGDCFSRTMKDEGMMSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSL FFVYSLDYARTRLANDAKAAKKGGGGRQFNGLFDVYKKTMQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGNLQDSFFASFALGWLITNGA GLASYPIDTVRRRMMMTSGEAVKYSSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13490		AAC2	ADP/ATP carrier 2 (.1.2)		Lus10031276 [exp]	0	1
AT4G37770		ACS8	1-amino-cyclopropane-1-carboxy...		Lus10007223 [exp]	13.3	0.7606
AT4G24510		VC2, VC-2, CER2	ECERIFERUM 2, HXXXD-type acyl-...		Lus10028171 [exp]	14.7	0.8857
					Lus10003555 [exp]	22.4	0.6954
AT1G07400			HSP20-like chaperones superfam...		Lus10016457 [exp]	51.4	0.7641
AT1G11120			unknown protein		Lus10011221 [exp]	54.7	0.7366
AT2G29660	C2H2ZnF		zinc finger (C2H2 type) family...		Lus10018219 [exp]	60.1	0.7520
AT1G70250			receptor serine/threonine kina...		Lus10032228 [exp]	60.9	0.7546
AT5G14870		ATCNGC18	cyclic nucleotide-gated channe...		Lus10039486 [exp]	78.3	0.7255
AT3G61940		ATMTPA1, MTPA1	Cation efflux family protein (...		Lus10012604 [exp]	94.5	0.7223
AT4G31940		CYP82C4	"cytochrome P450, family 82, s...		Lus10042922 [exp]	96.2	0.6842

Compare expression of checked genes

Lus10031276 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.