Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010948 [exp] 80 / 4e-18 AT5G63910 616 / 0.0 farnesylcysteine lyase (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10031379 pacid=23155827 polypeptide=Lus10031379 locus=Lus10031379.g ID=Lus10031379.BGIv1.0 annot-version=v1.0 ATGAGTTGGTTCTTCTACATATTACTGTTATGTCTTGGTCTCACATTCGATGCTCATACATTAGAAGCAAGGCATGTTTCGACGAAGCTTCCGACTGCAG TTCATCGTAATGCTCCACCCGATATCTCAGCTGTTGCAAAAATCGTTCGTGTCGCTTATCTCGATTTATTCTTTCATTTGCAGAATAGTTTCTCTGACGA AAAGGACTTATCAAGATTGATTCCGATACTACCCTCTCCAACTCCGATTGGTGACGGTAACGATGAAGGTGATGACGAACCAACTCTTCCACCTCCTGTA AATTCCGGTACAAACATTCCTCCGCCTGAGATGAACCAGAACCGGCTGCCACCTCTGCCTCCTCTGCCTCTGCTTCCAAGGCTACCTCCATTACCCCAAC TGCCTCCTATGCCGCTGCTTCCGCCCTGGCCGCCTGGTTCTAACTAA
AA sequence Show only first row Show all	>Lus10031379 pacid=23155827 polypeptide=Lus10031379 locus=Lus10031379.g ID=Lus10031379.BGIv1.0 annot-version=v1.0 MSWFFYILLLCLGLTFDAHTLEARHVSTKLPTAVHRNAPPDISAVAKIVRVAYLDLFFHLQNSFSDEKDLSRLIPILPSPTPIGDGNDEGDDEPTLPPPV NSGTNIPPPEMNQNRLPPLPPLPLLPRLPPLPQLPPMPLLPPWPPGSN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10031379 [exp]	0	1
AT2G20760			Clathrin light chain protein (...		Lus10039815 [exp]	4.2	0.9348
AT4G38840			SAUR-like auxin-responsive pro...		Lus10008991 [exp]	5.3	0.9514
AT5G64330		JK218, RPT3, NP...	ROOT PHOTOTROPISM 3, NON-PHOTO...		Lus10040484 [exp]	8.9	0.9449
AT4G38840			SAUR-like auxin-responsive pro...		Lus10009628 [exp]	13.3	0.9374
AT4G16515		RGF6	root meristem growth factor 6,...		Lus10008506 [exp]	13.6	0.9534
AT4G38840			SAUR-like auxin-responsive pro...		Lus10009001 [exp]	14.3	0.9284
AT1G33811			GDSL-like Lipase/Acylhydrolase...		Lus10000893 [exp]	15.9	0.8480
AT4G38840			SAUR-like auxin-responsive pro...		Lus10009623 [exp]	21.8	0.9093
AT5G15350		AtENODL17	early nodulin-like protein 17 ...		Lus10026064 [exp]	22.4	0.9492
AT5G27780			SAUR-like auxin-responsive pro...		Lus10023969 [exp]	22.8	0.9113

Compare expression of checked genes

Lus10031379 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.