Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G15680 2839 / 0 ARM repeat superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019255 [exp] 2885 / 0 AT5G15680 3488 / 0.0 ARM repeat superfamily protein (.1) Lus10035141 [exp] 2697 / 0 AT5G15680 3135 / 0.0 ARM repeat superfamily protein (.1) Lus10035142 [exp] 557 / 0 AT5G15680 541 / 3e-178 ARM repeat superfamily protein (.1) Lus10031962 [exp] 526 / 7e-168 AT5G15680 1224 / 0.0 ARM repeat superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G106100 [exp] 2892 / 0 AT5G15680 3580 / 0.0 ARM repeat superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10031961 pacid=23161133 polypeptide=Lus10031961 locus=Lus10031961.g ID=Lus10031961.BGIv1.0 annot-version=v1.0 ATGAAAGCAGGAAGTGCCGCGAAGCTGATTGTTGATGCGCTGCTACAGCGGTTTCTTCCCCTTGCTAGGCGCCGCATCGAAACGGCTCAAGCTCAGGATG GACAGTACCTTCGACCATCAGACCCTGCTTATGAGCAGGTGCTGGATTCCCTAGCTATGATTGCACGGCATACTCCAGTTCCTCTCTTAGAAGCTCTTCT TAGATGGCGAGAGAGCGAATCTCCAAAAGGGGCTAATGATGCATCTACTTTCCAGAGAAAGCTAGCCGTGGAGTGTATTTTCTGCTCAGCGTGTATTCGG TTTGTGGAATGCTGCCCACAGGAGGGACTAACAGAGAAGCTGTGGTCTGGGCTTGAGAATTTTGTATTTGATTGGTTGATTAATGCTGACAGAGTTGTTA GTCAGGTTGAATATCCCTCATTGGTTGATTTGCGAGGGCTCCTCTTGGATCTAGTTGCTCAGCTCCTTGGAGCCTTGTCGCGTATCAGGTTTAGTTCAGT AACTGAGCGCTTTTTCATGGAGCTAAATACACGTCGCATAGACACTAGTGTTGCCCGAAGCGAAACACTCAGTATTATCAATGGGATGCGATACTTAAAG CTTGGGGTGAAGACTGAGGGGGGCCTTAATGCATCAGCTTCTTTTGTGGCCAAAGCAAATCCATTGAATCGTTCTCCACACAAGCGCAAAAGTGAGCTCT ACCACGCACTCTGTAATATGCTCTCAAACATTCTAGCTCCATTGGCAGATGGCGCAAGAAACCAATGGCCTCCATCAGGTGTAGACAATGCTCTTACGCT GTGGTATGAGGCTGTTGGTCGAATAAGGATGCAACTTATACATTGGATGGACAAACAAAGCAAGCACATAGCTGTTGGCTACCCTCTGGTTACACTCCTT CTCTGTCTTGGTGATCCTCAAATATTTCACAGCAACCTAAGCCCACACATGGAGCAAATTTACAAGATTTTAGGAAAGGACAAGAACCATCGTTTCATGG CTTTAGACTGCCTTCATCGAGTTATGAGATTTTACTTGAATGTTCATGCAGCTAGTCAGCCCCCAAACCGTATATGGGACTACCTTGACAGTGTGACTTC TCATCTCTTAACAAATATACGGAAAGGAACGTTTACACAAGATGTACAGCACGATAAACTTGTTGAATTCTGTGTGACGATTGCGGAGCATAACCTCGAT TTCGCCATGAACCATATGATCTTAGAGTTGGTAAAGCAAGATAGTCCGAGTGATGCAAAAGTAATTGGTCTTCGTGCTTTGCTTGACATTGTCATGTCAC CTTCCAGCCCATATGTTGGTTTAGAAATATTCAAAGGACATGACATCGGTCACTATATACCCAAAGTGAAGGCAGCAATTGAATCAATTTTGAGGTCTTG TCATAGAGTCTACGGTCAGGCACTTTTGACTTCTTCCAAAACCACCATAGATGCTGTAACCAAGGAAAAGTCTCAAGGATACCTCTTCCGCTCTGTCTTG AAGTGTATACCATATCTGATTGAAGAAGTTGGGCGAAGTGATAAGATCACTGAAATAATTCCTCAGCATGGTATTAGTATTGATCCTGGGGTCCGTGAGG AAGCTGTACAAGTTTTGAACCGGATTGTTAGATATCTTCCGCATCGCCGGTTTGCAGTTATGAGAGGGATGGCAAACTTTATCCTTCGGCTCCCAGATGA ATTCCCCCTTCTCATTCAGACATCATTAGGACGTCTGTTAGATCTGATGCGTTTTTGGAGAGCTTGTTTGATTGATGATAGATTAGATAACAGTGCTGAT GATAGGAAGCGAGTGCCACAGAGAAATGAAGGATTTAAGAAATCTTCTTTCCATCACTCTGACGTGATCGAGTTTCGTGCATCAGATATAGACGCTGTTG GGTTAATCTTTCTTAGTTCTGTGGATAGCCAAATTAGGCACACAGCACTAGAGCTGCTGCGTTGTGTCCGTGCCTTATGGAATGATATACGAGACCTGAC AGTATATGCGCAGCTGGAGCAGAACCTGAGATGTGAAGCAGAACCAATATTTATTATTGATGTCCTAGAAGAACATGGGGATGACATTGTTCAGAGCTGT TATTGGGATTCTGGACGTCCATTTGATTTAAGACGAGAGTCTGATGCAATTCCTCCAGACGTGACTCTACAATCTATTATTTTTGAGAGCCCTGACAAGA ATAGATGGGCCAGGTGTCTAAGCGAACTTGTTAAATATGCCGCTGAGCTTTGCCCAAGCTCTGTTCTGGAAGCAAAGGTCGAAGTAGTTCAACGCCTTGC ACATATAACACCCATTGATTTAGGTGGCAAGGCTCATCAGTCACAAGATGGGGACAGCAAACTTGATCAGTGGCTCATGTATGCGATGTTTGCATGCTCT TGTCCACCAGATAGTAAAGAATCTGGCGGCTTTCAAGCAGTGAAAGATCTCTACCATCTTATATGCCCTTCATTGAGATCTGGTTCTGATGCGAACATAC ATGCAGCTACAATTGCTCTTGGTCGGTCACATTTGGAAGCGTGTGAAATAATGTTTAGTGAGCTGTCATCTTTTGTTGATGAAGTTTCTCTGGAGACTGA GGCAAAACCTAAGTGGAAGAGTCAAAAATCACGCAGGGAAGAGCTGCATGTGCACATAGCCAATACTTACCGCACTGTTGCAGAAAATATATGGCCCGGG ATGCTTAATCGTAAACCGGTCTTCCGTCTTCATTATCTGAGGTTCATTGATGACACAACCAGACAGATCTTAACATCACCAACTGAGAACTTTCAGGAAA TGCAGCCGCTTCGGTATGCTCTTGCATCTGTTATAAGATTTCTTGCACCTGAATTCGTAGACTCGAAATCGGAGAAATTTGACCTTAGAACTAGAAAGCG GCTGTTTGACCTTCTTCTATCTTGGAGTGATGACAACACTGGTACTGCTTGGGTGCAAGATGGTGCTAGTGATTACCGTCGTGAAGTTGAGCGGTATAAA GCTTCCCAGCACTACAGGTCAAAAGACTCTGTAGACAAAATCTCATTTGATAAAGATCTTAGTGACCAGATCGAGGCAATCCAGTGGGCATCCATGAATG CTATGGCTTCACTCTTGTATGGGCCTTGTTTTGATGACAATGCAAGGAAAATGAGTGGTCGGGTTATATCTTGGATCAACAGTTTGTTTAATGATCCTGC GCCTCGGGCTCCATTTGGTTACTCTCCAACTCCGTCTCACTCCAAATACACAGGGGAAGGTACACGTGGAGTTGCTGGCCGTGATAGGCATAGGGGTAGC CATCATCGTGTTGCTTTGGCAAAATTGGCTTTGAAGAATCTTCTCCTTACAAACTTGGACCTTTTCCCAGCTTGCATTGACCAGTGCTATTACTCTGATG CTGCTATTGCCGATGGCTACTTCAGTGTGCTAGCTGAGGTTTACATGCGTCAAGAGATCCCAAAATGTGAAATACAGCGGCTGGGGGGTGTGGCTTCTGG GGGTTATCGAGCTGCTGTTGTGGGAAATCTCCCCGATTCTTATCAACAATTCCAGTACAAGCTCTCATGTAAACTTGCCAAAGACCACCCAGAGTTGAGC CAGCTTTTGTGTGAGGAGATAATGCAGAGGCAACTTGATGCTGTTGATATAATTGCACAGCACCAGGTTTTGACATGCATGGCCCCATGGATTGAAAACC TTAATTTCTGGAAACTCAAGGACTCTGGTTGGAGTGAAAGGCTTCTAAAGAGCCTTTATTACGTCACATGGAGGCACGGGGATCAGTTTCCAGATGAAAT TGAGAAACTCTGGAGTACGATTGCCAGCAAAGCCCGGAACATAAGCCCTGTTTTAGATTTCCTGATCACAAAAGGGATAGAGGATTGCGATTCTAATGCA TCTGCAGAGATAAGCGGTGCATTTGCCACATATTTTTCAGTTGCAAAGAGGGTGAGCTTGTATTTAGCTCGGATCTGTCCACAGCGTACAATCGATCACT TGGTATATCAACTGGCTCAGCGTATGTCGGAAGACAGTATTGAACATGTTGGCCCAAGTTCAACCAAAGGTGATCCAAATGGAAGTTTTGTCTTGGAATT CTCCCAGGGGCCTGGGGCCGCACAAGTTGCTACCGTCTCCGATGTCCAGCCACATATGTCACCACTACTCGTCCGAGGTTCCCTCGATGGTCCCCTCAGA AATTCTAGCGGGAGCCTGAGCTGGCGAACGGCAGGTGCAACAGGGCGAAGCGTCTCTGGTCCCCTCAGTCCAATGCCTCCAGAACTCAATGTAGTCCCAG TGACAGCTGGCCGGTCAGGGCAGCTTCTTCCAGCTTTAGTAAACATGTCAGGTCCTTTAATGGGAGTTAGAAGTTCAACAGGAAGTTTGCGGAGTCGGAG TCGGCATGTATCTCGAGACAGTGGGGATTACCTCATTGCCACTCCAAATTCGGGGGAAGATGGGTTGCTTCCTGCAGTTGGTATGCACGGTGTTAACGCC AAAGAACTTCAATCAGCCTTACAAGGGCATCAACAACATTCACTTACTCATGCAGATATAGCCCTGATTCTTCTAGCTGAAATAGCATACGAGAATGATG AAGATTTTCGTGAGCACTTGCCTCTGCTTTTCCATGTCACATTCGTTTCAATGGATAGTTCGGAGGATATCGTGCTGGAACACTGTCAGCATTTGCTCGT TAATTTGCTCTACTCGCTAGCTGGTCGACACTTGGAACTGTACGAAGTGGAAAATTGCGATGGGGAGAACAAGCAGCAGGTCGTCAGTCTGATCAAGTAC GTACAATCGAAGCGAGGAAGCATGATGTGGGAAAATGAGGATCCTTCAGTTGTTCGACCTGTTCTTCCAAGTGCAGCACTTTTGTCAGCGCTTGTTCAAA GCATGGTTGATGCTATCTTCTTTCAAGGAGATCTCCGCGAGACTTGGGGCACAGAGGCTCTCAAGTGGGCTATGGAGTGCACATCAAGGCACTTGGCTTG CCGCTCCCACCAGATCTACCGTGCACTCCGTCCCAGTGTAACAAATGTCTCCACAGATGTCTCATAA
AA sequence Show only first row Show all	>Lus10031961 pacid=23161133 polypeptide=Lus10031961 locus=Lus10031961.g ID=Lus10031961.BGIv1.0 annot-version=v1.0 MKAGSAAKLIVDALLQRFLPLARRRIETAQAQDGQYLRPSDPAYEQVLDSLAMIARHTPVPLLEALLRWRESESPKGANDASTFQRKLAVECIFCSACIR FVECCPQEGLTEKLWSGLENFVFDWLINADRVVSQVEYPSLVDLRGLLLDLVAQLLGALSRIRFSSVTERFFMELNTRRIDTSVARSETLSIINGMRYLK LGVKTEGGLNASASFVAKANPLNRSPHKRKSELYHALCNMLSNILAPLADGARNQWPPSGVDNALTLWYEAVGRIRMQLIHWMDKQSKHIAVGYPLVTLL LCLGDPQIFHSNLSPHMEQIYKILGKDKNHRFMALDCLHRVMRFYLNVHAASQPPNRIWDYLDSVTSHLLTNIRKGTFTQDVQHDKLVEFCVTIAEHNLD FAMNHMILELVKQDSPSDAKVIGLRALLDIVMSPSSPYVGLEIFKGHDIGHYIPKVKAAIESILRSCHRVYGQALLTSSKTTIDAVTKEKSQGYLFRSVL KCIPYLIEEVGRSDKITEIIPQHGISIDPGVREEAVQVLNRIVRYLPHRRFAVMRGMANFILRLPDEFPLLIQTSLGRLLDLMRFWRACLIDDRLDNSAD DRKRVPQRNEGFKKSSFHHSDVIEFRASDIDAVGLIFLSSVDSQIRHTALELLRCVRALWNDIRDLTVYAQLEQNLRCEAEPIFIIDVLEEHGDDIVQSC YWDSGRPFDLRRESDAIPPDVTLQSIIFESPDKNRWARCLSELVKYAAELCPSSVLEAKVEVVQRLAHITPIDLGGKAHQSQDGDSKLDQWLMYAMFACS CPPDSKESGGFQAVKDLYHLICPSLRSGSDANIHAATIALGRSHLEACEIMFSELSSFVDEVSLETEAKPKWKSQKSRREELHVHIANTYRTVAENIWPG MLNRKPVFRLHYLRFIDDTTRQILTSPTENFQEMQPLRYALASVIRFLAPEFVDSKSEKFDLRTRKRLFDLLLSWSDDNTGTAWVQDGASDYRREVERYK ASQHYRSKDSVDKISFDKDLSDQIEAIQWASMNAMASLLYGPCFDDNARKMSGRVISWINSLFNDPAPRAPFGYSPTPSHSKYTGEGTRGVAGRDRHRGS HHRVALAKLALKNLLLTNLDLFPACIDQCYYSDAAIADGYFSVLAEVYMRQEIPKCEIQRLGGVASGGYRAAVVGNLPDSYQQFQYKLSCKLAKDHPELS QLLCEEIMQRQLDAVDIIAQHQVLTCMAPWIENLNFWKLKDSGWSERLLKSLYYVTWRHGDQFPDEIEKLWSTIASKARNISPVLDFLITKGIEDCDSNA SAEISGAFATYFSVAKRVSLYLARICPQRTIDHLVYQLAQRMSEDSIEHVGPSSTKGDPNGSFVLEFSQGPGAAQVATVSDVQPHMSPLLVRGSLDGPLR NSSGSLSWRTAGATGRSVSGPLSPMPPELNVVPVTAGRSGQLLPALVNMSGPLMGVRSSTGSLRSRSRHVSRDSGDYLIATPNSGEDGLLPAVGMHGVNA KELQSALQGHQQHSLTHADIALILLAEIAYENDEDFREHLPLLFHVTFVSMDSSEDIVLEHCQHLLVNLLYSLAGRHLELYEVENCDGENKQQVVSLIKY VQSKRGSMMWENEDPSVVRPVLPSAALLSALVQSMVDAIFFQGDLRETWGTEALKWAMECTSRHLACRSHQIYRALRPSVTNVSTDVS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G15680			ARM repeat superfamily protein...		Lus10031961 [exp]	0	1
AT2G26890		KAM2, GRV2	KATAMARI2, GRAVITROPISM DEFECT...		Lus10017747 [exp]	1.0	0.9777
AT1G03060		SPI	SPIRRIG, Beige/BEACH domain ;W...		Lus10018743 [exp]	2.0	0.9770
AT2G46560			transducin family protein / WD...		Lus10030236 [exp]	3.3	0.9595
AT5G44240		ALA2	aminophospholipid ATPase 2 (.1...		Lus10018619 [exp]	3.7	0.9623
AT2G35630		GEM1, MOR1	MICROTUBULE ORGANIZATION 1, AR...		Lus10001216 [exp]	4.6	0.9671
AT5G44240		ALA2	aminophospholipid ATPase 2 (.1...		Lus10039854 [exp]	5.5	0.9608
AT5G44800		PKR1, CHR4, MI-...	PICKLE RELATED 1, chromatin re...		Lus10036223 [exp]	5.5	0.9642
AT2G46560			transducin family protein / WD...		Lus10005975 [exp]	6.0	0.9662
AT4G39850		AtABCD1, ACN2, ...	PEROXISOME DEFECTIVE 3, COMATO...		Lus10041690 [exp]	6.2	0.9399
AT5G42220			Ubiquitin-like superfamily pro...		Lus10034563 [exp]	6.7	0.9563

Compare expression of checked genes

Lus10031961 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.