Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G13140 180 / 1e-53 CYP86C3 "cytochrome P450, family 86, subfamily C, polypeptide 3", cytochrome P450, family 86, subfamily C, polypeptide 3 (.1.2) AT4G39490 178 / 7e-53 CYP96A10 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) AT2G23180 177 / 4e-52 CYP96A1 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) AT1G47620 174 / 6e-51 CYP96A8 "cytochrome P450, family 96, subfamily A, polypeptide 8", cytochrome P450, family 96, subfamily A, polypeptide 8 (.1) AT1G57750 171 / 2e-50 MAH1, CYP96A15 MID-CHAIN ALKANE HYDROXYLASE 1, "cytochrome P450, family 96, subfamily A, polypeptide 15", cytochrome P450, family 96, subfamily A, polypeptide 15 (.1.2) AT2G21910 171 / 3e-50 CYP96A5 "cytochrome P450, family 96, subfamily A, polypeptide 5", cytochrome P450, family 96, subfamily A, polypeptide 5 (.1) AT5G02900 168 / 3e-49 CYP96A13 "cytochrome P450, family 96, subfamily A, polypeptide 13", cytochrome P450, family 96, subfamily A, polypeptide 13 (.1) AT3G26125 169 / 4e-49 CYP86C2 "cytochrome P450, family 86, subfamily C, polypeptide 2", cytochrome P450, family 86, subfamily C, polypeptide 2 (.1) AT1G13150 168 / 6e-49 CYP86C4 "cytochrome P450, family 86, subfamily C, polypeptide 4", cytochrome P450, family 86, subfamily C, polypeptide 4 (.1) AT4G39480 167 / 2e-48 CYP96A9 "cytochrome P450, family 96, subfamily A, polypeptide 9", cytochrome P450, family 96, subfamily A, polypeptide 9 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035235 [exp] 345 / 5e-117 AT4G39490 359 / 2e-118 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10035234 [exp] 288 / 4e-95 AT4G39490 382 / 1e-127 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10002527 [exp] 231 / 7e-73 AT2G23180 454 / 7e-156 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10003669 [exp] 227 / 2e-71 AT2G23180 440 / 4e-150 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10022279 [exp] 224 / 1e-70 AT2G23180 449 / 4e-154 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10028047 [exp] 199 / 1e-60 AT2G21910 375 / 1e-125 "cytochrome P450, family 96, subfamily A, polypeptide 5", cytochrome P450, family 96, subfamily A, polypeptide 5 (.1) Lus10022277 [exp] 196 / 1e-59 AT4G39490 395 / 1e-132 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Lus10003756 [exp] 186 / 7e-59 AT2G23180 219 / 1e-68 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Lus10002525 [exp] 193 / 3e-58 AT4G39490 410 / 2e-138 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G397900 [exp] 191 / 9e-58 AT4G39490 480 / 6e-166 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.015G086900 [exp] 189 / 8e-57 AT2G23180 455 / 2e-156 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Potri.007G080300 [exp] 186 / 8e-56 AT4G39490 574 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.005G064400 [exp] 185 / 2e-55 AT4G39490 477 / 8e-165 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.015G132800 [exp] 180 / 1e-53 AT4G39490 589 / 0.0 "cytochrome P450, family 96, subfamily A, polypeptide 10", cytochrome P450, family 96, subfamily A, polypeptide 10 (.1) Potri.008G183300 [exp] 171 / 8e-50 AT1G24540 682 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.015G087000 [exp] 166 / 5e-49 AT2G23180 373 / 2e-125 "cytochrome P450, family 96, subfamily A, polypeptide 1", cytochrome P450, family 96, subfamily A, polypeptide 1 (.1) Potri.010G050100 [exp] 168 / 8e-49 AT1G24540 684 / 0.0 "cytochrome P450, family 86, subfamily C, polypeptide 1", cytochrome P450, family 86, subfamily C, polypeptide 1 (.1) Potri.005G094500 [exp] 167 / 2e-48 AT1G47620 372 / 7e-124 "cytochrome P450, family 96, subfamily A, polypeptide 8", cytochrome P450, family 96, subfamily A, polypeptide 8 (.1) Potri.009G043700 [exp] 165 / 9e-48 AT5G58860 827 / 0.0 "cytochrome P450, family 86, subfamily A, polypeptide 1", cytochrome P450, family 86, subfamily A, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [flax] [poplar] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Lus10032085 pacid=23161221 polypeptide=Lus10032085 locus=Lus10032085.g ID=Lus10032085.BGIv1.0 annot-version=v1.0 ATGCTGGCTGGCAGAGACACCGTTGCTGCTGGTTTGACTTGGTTCTTTTTGCTTGTCGTCACTCATCCTGATGTCGAACGAAAAATCTTGGAAGAAATTG ATGGAGTAATTACCCAGTCAGGTGAAAAACAGAGGAGGTTTCCAAGCATGGAGGAGATGAACAAAATGGTGTATCTACAGGGAGCAATAAGCGAGACAAT GAGGCTATACCCACCGGGGCCTTTCAACCAAAAACAATCACTGGAACGCGACGTGCTCCCAAGCGGCCACGCCATTGACAGGAGCACGAGGATTCTGATA TCCGTCTACTCGATGGGGAGGGTGGAGGAGATATGGGGGGAGGATTGCTTGGAGTTCAAACCTGAGAGGTGGGTTTTACTGCAGAGAGATAATGGCGATG ATGGTGATCATAAGATGATGAAGAAGGGGATGGTGCATGTTCCATCTTACAAGTTGTCAGCTTTTCTAGCAGGGCCTAGGGTTTGCCCTGGGAGGCAGAT TGCATTTGGGGAGATGAAAACTGTAGCGCATGCTGTTTTGAGTAGGTTTAAGATTCAGGTGGTGGAGGATTGTGGTGGTAAAGGATGTGGTTCCACTTGC TTCTGTTGTGTTGTTCATGAAATATGGGTTGAAGGTTCGGGTTTCCAGGAGGACCGACGGCATTTTCTGAGTGACGATCTTGTATTAGTGGCGGATGTAT GGAGGAGCCTCTTCCAGCTAGGTCCAGCACATTGCCGAATTTAG
AA sequence Show only first row Show all	>Lus10032085 pacid=23161221 polypeptide=Lus10032085 locus=Lus10032085.g ID=Lus10032085.BGIv1.0 annot-version=v1.0 MLAGRDTVAAGLTWFFLLVVTHPDVERKILEEIDGVITQSGEKQRRFPSMEEMNKMVYLQGAISETMRLYPPGPFNQKQSLERDVLPSGHAIDRSTRILI SVYSMGRVEEIWGEDCLEFKPERWVLLQRDNGDDGDHKMMKKGMVHVPSYKLSAFLAGPRVCPGRQIAFGEMKTVAHAVLSRFKIQVVEDCGGKGCGSTC FCCVVHEIWVEGSGFQEDRRHFLSDDLVLVADVWRSLFQLGPAHCRI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G13140		CYP86C3	"cytochrome P450, family 86, s...		Lus10032085 [exp]	0	1
AT5G27930			Protein phosphatase 2C family ...		Lus10031475 [exp]	3.5	0.9255
AT1G22400		ATUGT85A1, UGT8...	ARABIDOPSIS THALIANA UDP-GLUCO...		Lus10013924 [exp]	13.6	0.9281
AT2G13620		ATCHX15	CATION/H+ EXCHANGER 15, cation...		Lus10040881 [exp]	18.5	0.9264
AT2G38750		ANNAT4	annexin 4 (.1)		Lus10039551 [exp]	27.9	0.9248
AT4G35150			O-methyltransferase family pro...		Lus10033655 [exp]	33.8	0.9202
AT3G28857	bHLH	PRE5	Paclobutrazol Resistance 5, ba...		Lus10012842 [exp]	37.1	0.9187
AT2G15580			RING/U-box superfamily protein...		Lus10030120 [exp]	39.2	0.9172
AT5G59310		LTP4	lipid transfer protein 4 (.1)		Lus10007280 [exp]	39.8	0.9177
AT5G64440		ATFAAH	fatty acid amide hydrolase (.1...		Lus10020469 [exp]	46.9	0.9139
AT4G35150			O-methyltransferase family pro...		Lus10017699 [exp]	47.0	0.9168

Compare expression of checked genes

Lus10032085 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.