Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22360 161 / 4e-46 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22400 159 / 3e-45 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22380 155 / 9e-44 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22370 150 / 3e-43 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G22340 150 / 1e-41 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G78270 135 / 3e-36 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT3G46700 81 / 5e-17 UDP-Glycosyltransferase superfamily protein (.1) AT5G59590 80 / 9e-17 UGT76E2 UDP-glucosyl transferase 76E2 (.1) AT3G46670 79 / 2e-16 UGT76E11 UDP-glucosyl transferase 76E11 (.1) AT4G15480 79 / 2e-16 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032218 [exp] 189 / 1e-56 AT1G22380 564 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024584 [exp] 187 / 6e-56 AT1G22400 570 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10032220 [exp] 182 / 1e-53 AT1G22380 601 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024583 [exp] 180 / 5e-53 AT1G22380 598 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10031388 [exp] 155 / 8e-44 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013652 [exp] 148 / 1e-41 AT1G22360 359 / 3e-121 UDP-glucosyl transferase 85A2 (.1.2) Lus10010943 [exp] 152 / 2e-41 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10010665 [exp] 147 / 1e-40 AT1G22400 516 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10041055 [exp] 146 / 3e-40 AT1G22360 610 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G098300 [exp] 173 / 3e-50 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G312600 [exp] 169 / 5e-49 AT1G22360 586 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052166 [exp] 168 / 1e-48 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052300 [exp] 167 / 3e-48 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052000 [exp] 163 / 1e-46 AT1G22360 617 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052400 [exp] 162 / 3e-46 AT1G22360 620 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052232 [exp] 161 / 7e-46 AT1G22360 622 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098400 [exp] 159 / 2e-45 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 157 / 1e-44 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052100 [exp] 156 / 4e-44 AT1G22360 612 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10032219 pacid=23168644 polypeptide=Lus10032219 locus=Lus10032219.g ID=Lus10032219.BGIv1.0 annot-version=v1.0 ATGAGCACTTCTCAAGATGTCCAACCTCCACACGCAGTATGCGTACCATTCCCAGCACAAGGCCACATCAACCCAATGCTAAAGCTAGCCAAACTCCTTC ACCAAAAGGATTCCACATCACCTTCGTCAATACAGAGTTCAACCACCGTCGCCTCCTCCAATCTCGAGGCTCCACGGCCTTCGACAACCTCTCGAGGAGT CGCTTACGATTCGAGACCATCCCTGACGGGCTTCCTCTGCCGTCGGATGAGGATGCGACTCAGGACGTGGCCTCTCTATGCGTCCCTCCACCAGGAACTT GGGATCCCTACTACTTATTCTCGTCCAATGCCTTTTTCTCAATTTTTCGGAACCGGACTAGACGGTTGCGCCAATAAAATAAAAGGTCCAAGCCAAGGCG GAGCCAGAAAATTGGCAAAATACCCGAAAGATTTCGTGCTCAATTTCGCAATGAGAGAGGTCGAAAATGCTCGAAACGCCTCGGCACTCATAATCAACAC ATTTGACAAACTAGAAGGAGAAATCATCCAATCCCTCTCCCCAAACTACCCTCCAATCCACACAATCGGCCCCCTTCAACTTATGAACGACATCGTCCGA GGAAGCGACGACCACTTGGACTCTCTAGAATCAAACCTATGGAAGGAACAACCCGGTTGCCTCGACTGGCTCGACCGAAAACCCTCCAAATCGATCGTTT ACGTGAATTTCGGAAGCATCACGGTCATCACATCTCATCAACCGGTCGAGTTCGCCTGGGGACTAGCCACGAGTAAGAAGGCGTTTTTGTGGGTCGTCAG GCCGGACCTTGTTAGGGGGGAGTCCGCGGTCCTTCCCGCGAGTTTACATACGAAATTAGGGACAGGGGATTGCTGGTGA
AA sequence Show only first row Show all	>Lus10032219 pacid=23168644 polypeptide=Lus10032219 locus=Lus10032219.g ID=Lus10032219.BGIv1.0 annot-version=v1.0 MSTSQDVQPPHAVCVPFPAQGHINPMLKLAKLLHQKDSTSPSSIQSSTTVASSNLEAPRPSTTSRGVAYDSRPSLTGFLCRRMRMRLRTWPLYASLHQEL GIPTTYSRPMPFSQFFGTGLDGCANKIKGPSQGGARKLAKYPKDFVLNFAMREVENARNASALIINTFDKLEGEIIQSLSPNYPPIHTIGPLQLMNDIVR GSDDHLDSLESNLWKEQPGCLDWLDRKPSKSIVYVNFGSITVITSHQPVEFAWGLATSKKAFLWVVRPDLVRGESAVLPASLHTKLGTGDCW

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22400		ATUGT85A1, UGT8...	ARABIDOPSIS THALIANA UDP-GLUCO...		Lus10032219 [exp]	0	1
AT4G17905		ATL4H	RING/U-box superfamily protein...		Lus10027736 [exp]	1.0	0.9573
AT3G47570			Leucine-rich repeat protein ki...		Lus10037310 [exp]	5.0	0.9409
					Lus10004442 [exp]	5.3	0.9314
AT2G22570		NIC2, ATNIC1	A. THALIANA NICOTINAMIDASE 1, ...		Lus10035945 [exp]	5.5	0.9382
AT4G03230			S-locus lectin protein kinase ...		Lus10018512 [exp]	8.6	0.9035
AT2G42140			VQ motif-containing protein (....		Lus10004172 [exp]	9.1	0.9155
AT5G46110		TPT, APE2	triose-phosphate ⁄ phosp...		Lus10037085 [exp]	9.7	0.9418
AT5G44080	bZIP		Basic-leucine zipper (bZIP) tr...		Lus10018857 [exp]	13.6	0.9262
AT5G20660			Zn-dependent exopeptidases sup...		Lus10037997 [exp]	15.7	0.9367
AT5G42655			Disease resistance-responsive ...		Lus10032310 [exp]	15.9	0.9411

Compare expression of checked genes

Lus10032219 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.