Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22380 579 / 0 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22400 568 / 0 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22360 565 / 0 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22340 558 / 0 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G22370 541 / 0 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G78270 518 / 0 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT5G59590 261 / 8e-82 UGT76E2 UDP-glucosyl transferase 76E2 (.1) AT5G59580 258 / 8e-81 UGT76E1 UDP-glucosyl transferase 76E1 (.1) AT3G46660 257 / 2e-80 UGT76E12 UDP-glucosyl transferase 76E12 (.1) AT3G46670 256 / 6e-80 UGT76E11 UDP-glucosyl transferase 76E11 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024583 [exp] 884 / 0 AT1G22380 598 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10032218 [exp] 721 / 0 AT1G22380 564 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024584 [exp] 709 / 0 AT1G22400 570 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10031388 [exp] 613 / 0 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10041055 [exp] 551 / 0 AT1G22360 610 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Lus10013924 [exp] 533 / 0 AT1G22400 551 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013925 [exp] 533 / 0 AT1G22380 560 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10013923 [exp] 529 / 0 AT1G22400 537 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10000993 [exp] 523 / 0 AT1G22380 563 / 0.0 UDP-glucosyl transferase 85A3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G098300 [exp] 663 / 0 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098400 [exp] 609 / 0 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052166 [exp] 589 / 0 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052300 [exp] 589 / 0 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052232 [exp] 573 / 0 AT1G22360 622 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 573 / 0 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052400 [exp] 570 / 0 AT1G22360 620 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052000 [exp] 568 / 0 AT1G22360 617 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.016G021000 [exp] 566 / 0 AT1G22360 561 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G312600 [exp] 559 / 0 AT1G22360 586 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10032220 pacid=23168552 polypeptide=Lus10032220 locus=Lus10032220.g ID=Lus10032220.BGIv1.0 annot-version=v1.0 ATGGGCATCTCTGAAAATGATCGACGTCCACACGCAGTGTGCATACCATTCCCAGCACAAGGCCACATCAACCCGATGCTCAAGCTAGCCAAACTCCTTC ACCAAAAGGGATTCCACGTCACTTTCGTCAACACCGAGTTCAACCACCGTCGCCTCCTCCGATCTCGAGGCTCCGCGGCCTTCCACCACAGCTCGAGTCA CTTCCGATTCGAGACCATCCCCGACGGGCTGCCACCCTCGGACGAGGACGCGACCCAAGACGTTCCGTCTATATGTGAGTCCACCAGGAAGACTTGCTTG GGTCCTTTCAGACGGCTCGTTTCGAAGCTGAACGACTCCGTCTCGGAAGTGCCCCCGGTTACTTGCATAGTTTCTGATTGTATCTTGGGGTTCACGGTTC AAGTTGCTAAGGAACTTGGGATTCCTAATGTGATGTTTTGGACGGCTAGTGCTTGTGGATTCTTGGGGTTTCTCAATTACTGCAAACTTCTCGAGAAGGG CATTTTCCCACTCAAAGCTAAACATTTTCATGATTTTCAAGATGCAAGTATGATAACCAATGGATATCTGGACACCACTATTGATTGGATCCCTGGCATG GAAGGCATTCCATTGAAGTACATGCCAACCTTTCTACGTACGACAGACCCGAACGACGTCATGTTCAATTTCGCCATGGGACAAGTCGAAAATTCTCGAA ACGCCTCGGCGATTGTACTCAACACGTACGATAAGTTAGAAGAGGATGTCCTTCGGGCTCTTTCGCGTACCTTGGCTCCTCCGATATACACACTCGGTCC TCTCGACCTCATGACTCTCCGTGAAAATGATCTGGACTCTCTGGGGTCGAACCTGTGGAAAGAAGAATCTGGTTGCCTCGAATGGCTCGACCAGAAAGAA CCCAACTCGGTCGTTTACGTGAATTTCGGGAGTATCACGGTCATGACACCTCATCAATTGGTCGAGTTCGCTTGGGGACTGGCGAAGAGCAAAAAGACAT TCTTATGGGTCATCAGGCCTGACCTTGTTCAGGGTGCGTCCGCGATTCTTCCCGGGGAATTTTCGGACGAGGTGAAGGAAAGGGGATTGTTGGTTAGTTG GTGCCCGCAAGACAGAGTCCTGAAGCACCCTTCGATAGGAGGGTTCCTGACGCATTGTGGGTGGAACTCAACACTGGAGAGTTTGACAAGTGGCGTGCCG ATGATTTGTTGGCCGTTTTTCGCGGAGCAACAGACGAATTGTTGGTTTGTTTGTAACAAATGGAGGGTTGGAGTTGAGATTGATAGTGATGTTAAGAGGG ATGAGATTGATGAGCTTGTTAAGGAGTTGATTGATGGGGTGAAGGGGAAAGAGATGAAAGAAACAGCAATGGAGTGGAAGAGATTGGCTGAGGAGGCTGC TCAATGTGAGATTGGACATGCTTACTTGAACTTAGAAAGTGTGATTAATAATGTTCTTCTTAATTCTGTGTGA
AA sequence Show only first row Show all	>Lus10032220 pacid=23168552 polypeptide=Lus10032220 locus=Lus10032220.g ID=Lus10032220.BGIv1.0 annot-version=v1.0 MGISENDRRPHAVCIPFPAQGHINPMLKLAKLLHQKGFHVTFVNTEFNHRRLLRSRGSAAFHHSSSHFRFETIPDGLPPSDEDATQDVPSICESTRKTCL GPFRRLVSKLNDSVSEVPPVTCIVSDCILGFTVQVAKELGIPNVMFWTASACGFLGFLNYCKLLEKGIFPLKAKHFHDFQDASMITNGYLDTTIDWIPGM EGIPLKYMPTFLRTTDPNDVMFNFAMGQVENSRNASAIVLNTYDKLEEDVLRALSRTLAPPIYTLGPLDLMTLRENDLDSLGSNLWKEESGCLEWLDQKE PNSVVYVNFGSITVMTPHQLVEFAWGLAKSKKTFLWVIRPDLVQGASAILPGEFSDEVKERGLLVSWCPQDRVLKHPSIGGFLTHCGWNSTLESLTSGVP MICWPFFAEQQTNCWFVCNKWRVGVEIDSDVKRDEIDELVKELIDGVKGKEMKETAMEWKRLAEEAAQCEIGHAYLNLESVINNVLLNSV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10032220 [exp]	0	1
AT5G50760			SAUR-like auxin-responsive pro...		Lus10003140 [exp]	1.4	0.9579
AT1G76690		OPR2, ATOPR2	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Lus10009473 [exp]	3.5	0.9523
AT4G01070		UGT72B1, GT72B1	UDP-GLUCOSE-DEPENDENT GLUCOSYL...		Lus10029453 [exp]	6.0	0.9128
AT4G27290			S-locus lectin protein kinase ...		Lus10016871 [exp]	6.5	0.9508
AT5G58630			unknown protein		Lus10040661 [exp]	6.9	0.9329
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Lus10007631 [exp]	7.3	0.9386
AT3G51520			diacylglycerol acyltransferase...		Lus10013796 [exp]	8.5	0.8936
AT3G11340		UGT76B1	UDP-dependent glycosyltransfer...		Lus10016461 [exp]	8.7	0.9486
AT4G15550		IAGLU	indole-3-acetate beta-D-glucos...		Lus10019989 [exp]	11.8	0.9297
					Lus10033269 [exp]	12.2	0.9424

Compare expression of checked genes

Lus10032220 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.