Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G63640 965 / 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) AT5G41310 816 / 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G73860 674 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G18410 630 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT3G44730 533 / 9e-171 AtKIN14h, ATKP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) AT5G27000 526 / 3e-169 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT2G47500 513 / 2e-164 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G09170 486 / 1e-153 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT3G10310 452 / 6e-142 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT2G22610 339 / 4e-99 Di-glucose binding protein with Kinesin motor domain (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024628 [exp] 2106 / 0 AT1G63640 980 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10002007 [exp] 1384 / 0 AT1G63640 941 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10032897 [exp] 545 / 2e-174 AT3G44730 1302 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Lus10029865 [exp] 536 / 1e-172 AT5G27000 1014 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10015212 [exp] 508 / 3e-163 AT5G27000 924 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10009851 [exp] 509 / 7e-163 AT2G47500 1245 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Lus10001306 [exp] 498 / 4e-158 AT3G44730 1240 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Lus10018049 [exp] 473 / 5e-149 AT5G27000 874 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10042045 [exp] 469 / 2e-147 AT3G10310 863 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G127800 [exp] 1088 / 0 AT1G63640 1065 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.001G104000 [exp] 1076 / 0 AT1G63640 1102 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.015G047400 [exp] 832 / 0 AT1G63640 908 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.012G056700 [exp] 820 / 0 AT1G63640 857 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.001G467600 [exp] 551 / 4e-177 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.011G165200 [exp] 539 / 2e-172 AT3G44730 1300 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.014G125700 [exp] 532 / 2e-171 AT2G47500 1218 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.002G201000 [exp] 529 / 3e-170 AT2G47500 1237 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.013G011500 [exp] 530 / 4e-170 AT5G27000 1081 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Potri.005G021100 [exp] 527 / 3e-169 AT2G47500 1051 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain CL0188 [flax] [poplar] CH PF00307 [flax] [poplar] CH Calponin homology (CH) domain
Representative CDS sequence Show only first row Show all	>Lus10032264 pacid=23168634 polypeptide=Lus10032264 locus=Lus10032264.g ID=Lus10032264.BGIv1.0 annot-version=v1.0 ATGGTCACAACTTCTGAAAGAGAAACACGCAAAGGTGGGCTTAGCACGAGCGCTCAGTCTCAAAGGAGTATAAACGAGATGGGAATTTATGCTAGATTCG GTAGCATGGCTCGTCCAAAAGAAGGAAGGCTCCAAGACAATGGTTATGGTACTGTGAAGTCACTAGTTGAGTGGTTGAACAATCTGTTCCCCGAGTTGAA TTTGCCGTCTGAAACATCAGAGGAGGATCTAAGAGACTGCTTGATTGACGGTACCGTTTTATGCAGCATCCTGAACAAACTGAGACCTGGTGTGATTGAC ATGAGGACCAATTTCAGGCCTATCTTCGGTGTGGATTACCTCAAAAGGTTTCTAGATGAAATGGACGAAATGGGCCTTCTTAGGTTTGTACTTGAAGACA TACAACAGGGTTATATGCTGCCTGTACTTCAGTGTCTTGGAACCCTTAAGGAGCGTTTAGAAAGTGCAGATATTCATAATGGTTCAAGAAGGAGATTGAA TGTAAAGGAGGTTGAGCTTTCTAACAGAATTGATCATTCATCATTTAACTTGGAGAACTCTGCTATAAATGGTGGAGAGAAGCAACAGAATTCTATTGAT GGTGCTAATCGATATGTGGTTTCTCTTTTAGAGGCATGTGCAAGAAATAAGATGTCCAAGGTGTTAGAGCAGGGTTTATCTGCTGATCTCTCTGACGACC ATATTGCAGAGGTGATAAAGTTTAGTAGTGTGGATACTATATCAACCTGCACATTGTTCAGTTTTGTGAACCAGCTACTCGATGACAGCATCTTCAAAAA GGATGGGCATGTTTATCATATTGCAAGGATGTTGACGCAAGTCATCCAAGTTATTGAACAAAGAGTGTCTGCTCAAGCAGAGAACTTGAAAGATAAAAAT TATCTTTGTAGGGTTCGCTCTGAAAAGTACCAGTCAAGAGTAAAGGTAACTGAGACCCTTGCTTCTGGTGCCGCAGAAGAAATAGAGGTTTTGTTTTCAC ACCTAAAACAGGCAAAGATTGAAAAAACTGAAATAGATGAGAAAGAACAGGATCTGAATAATAGTTTGAAGGAGAAAACTTGTCTGGAGAACGAGAAGGC TGCACTGAATCGCGAATTGGAGGCAATGAAGAAGACGCATGAAGACCATTGCTTACAGCTAGAGGCACAAGCTAAGGAAACAAAACAAGTATTGGAAAAG AGGTCACATGAACTCGAGCGCTTTTTGATGGAGTCACAGAAGAGGGTGAAACAACTTGAGTCCTTCACAGAATCAAAATCTGAAGGATGGAAGAAGAAAG AGGAAACTTTTAAAGTCGTCCTTGACAACCAGCAGAGAGCCTTACAGGAAATGAGAGCAGTTTATGCATCTATCAAACAAGAAGTTACGCTGACAAAGAG GAGATATGCAGAGCAGTTTTATGGCATGGGAGTGGAGCTTGAAGGAGTAGTGCATGCTGCTGAAAATTATCATTCGGTTCTTGCAGAAAATAGAAAATTA TACAACGAGGTTCAGGACTTGAAAGGTAATATAAGAGTATATTGTAGGGTGCGACCGTTCCTTCCCGGCCAAAGTAAGAAACTGACAAGCATAGAGTATA TCGGCGAAAATGGTGAATTACTCGTCTCCAATCCTACCAAGCCAGGGAAAGACACTCGTAAAACGTTCAAATTTAACATGGTTTACGGTCCATCAGCTAG TCAAGAGGAAGTGTTTTTGGATACTCGGCCATTAATTAGGACCGTTCTTGATGGATTCAATGTATGTATCTTTGCTTATGGTCAAACTGGATCAGGAAAG ACATATACAATGAGCGGGCCTAGTATTTCATCAAAAGAAGGTTGGGGAGTCAATTATCGAGCATTGCACGATCTTTTTCATATCGCTCAAAGTAGGAAAG GCTCAATGACATATGAGATTGGGGTTCAGATGGTCGAAATATATAACGAACAAGTTCGTGACCTTCTCACATGCCAAGCTGTCCCTGATGCCAGCATGCA TCAAGTTACATCGACTGAAGACGTCTTGGAGTTAATGAACGCTGGATTCATGAACCGTGCTGTTGGTGCTACTGCGATGAACGAACGGAGTAGTAGATCC CACAGCGTACTCACAATTCATGTCCGCGGAATGGATTCGGAGACTGGTACGCTTTTACGAGGGAATCTACACTTGGTAGATCTTGCCGGTAGTGAAAGGG TGGATCGGTCCGAAGTGACTGGAGACAGATTAAGAGAGGCACAACACATAAACAAGTCCCTCTCTGCACTTGGAGATGTGATATTTGCCCTTGCACAGAA AAGCCAACATGTACCGTACAGAAACAGCAAACTTACTCAAGTGCTTCAGAGTTCTCTAGGTGGTCAAGCCAAGACCCTTATGTTTGTGCAGCTTAATCCT GATCCGGATTCGTATTCTGAAACGGTGAGCACTTTGAAGTTTGCTGAGAGAGTTTCTGGAGTTGAGTTAGGAGCTGCAAGGAGCAATAAAGAAGGAAGAG ATATTAGGGAACTTATGGATCAGGTCACGTCACTGAAGGAAACCATTGTAAAGAAAGATGAAGAGATGGAGCGGTTGCAGCTGTTCAAGATCAATACCAA TAGTCCAAAGTCTACCAATAGTCCGAAGTCTGTCCGGTTTGAGTCCTCTCCTCGAAGATTTTCGGTCGGAAATCCGGGGTACAGTCCTAACTCACCTGGA AGGAGAAGAACCACACGACGGTCGGATAGAGAAATGGACATCTGCTCCGAGTATAGCCCCAAGTCTTCCGGAAGGAAAACTTCACCTCCGGTTTACAAAG AACGGGACATGTGCTCTGAATACGGTGGAAGGCGTTCGGATATTTGTTCACTTCCAACGATGGATGAGTTTAAGCGTCCTCCTCGTAGGGCTAGTTTTGC ACATTCAAAGCCAGTGATATCGCCAAGGGCTCACGAGTCCAAAATTCCCGTAGCAAAGGCATTCCAGAAGGATTCTAAAGAAGACATTGAGCTCTTCGGG TTCGGAAGTGGAGATTCCGACGAGAGAATAATTGACATCTCAGACGCTGGGCTTTCCATGGGACATGAGACTGATGGTTCATCAGGCAGTGCAGTGGAAT ACACTCTTTTCCCTGAATCTGCAAACCCATCAACTGAATCAACTAGCTTGCGAACAAGGGTTTCAAACTCCGTAGAGACCTCCAGATCATCATCTGGTAA CATTGCACAAGCTACAAGACCGACAGGGAGACAACCTGACAGTTTGGAGAGGCGGATGGTTGTTACTACATCTAAGCTTCCGAAACCCTCTCAAAAGGCG GCACCACAGACGAGATTATCTCGCTTATCATTGCATAATGAGCCAGCTACTACTACATCAAAGTTCCAATCAACAGCTACATCGACGACGCATAGGAAAC CCACGATTACAGTGGGAAGCTCGTTTGCGAGCAGCAGCAGATCAACGAGGCAAACAGGCATTAGAACTGAAAGAAGTCTATAG
AA sequence Show only first row Show all	>Lus10032264 pacid=23168634 polypeptide=Lus10032264 locus=Lus10032264.g ID=Lus10032264.BGIv1.0 annot-version=v1.0 MVTTSERETRKGGLSTSAQSQRSINEMGIYARFGSMARPKEGRLQDNGYGTVKSLVEWLNNLFPELNLPSETSEEDLRDCLIDGTVLCSILNKLRPGVID MRTNFRPIFGVDYLKRFLDEMDEMGLLRFVLEDIQQGYMLPVLQCLGTLKERLESADIHNGSRRRLNVKEVELSNRIDHSSFNLENSAINGGEKQQNSID GANRYVVSLLEACARNKMSKVLEQGLSADLSDDHIAEVIKFSSVDTISTCTLFSFVNQLLDDSIFKKDGHVYHIARMLTQVIQVIEQRVSAQAENLKDKN YLCRVRSEKYQSRVKVTETLASGAAEEIEVLFSHLKQAKIEKTEIDEKEQDLNNSLKEKTCLENEKAALNRELEAMKKTHEDHCLQLEAQAKETKQVLEK RSHELERFLMESQKRVKQLESFTESKSEGWKKKEETFKVVLDNQQRALQEMRAVYASIKQEVTLTKRRYAEQFYGMGVELEGVVHAAENYHSVLAENRKL YNEVQDLKGNIRVYCRVRPFLPGQSKKLTSIEYIGENGELLVSNPTKPGKDTRKTFKFNMVYGPSASQEEVFLDTRPLIRTVLDGFNVCIFAYGQTGSGK TYTMSGPSISSKEGWGVNYRALHDLFHIAQSRKGSMTYEIGVQMVEIYNEQVRDLLTCQAVPDASMHQVTSTEDVLELMNAGFMNRAVGATAMNERSSRS HSVLTIHVRGMDSETGTLLRGNLHLVDLAGSERVDRSEVTGDRLREAQHINKSLSALGDVIFALAQKSQHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNP DPDSYSETVSTLKFAERVSGVELGAARSNKEGRDIRELMDQVTSLKETIVKKDEEMERLQLFKINTNSPKSTNSPKSVRFESSPRRFSVGNPGYSPNSPG RRRTTRRSDREMDICSEYSPKSSGRKTSPPVYKERDMCSEYGGRRSDICSLPTMDEFKRPPRRASFAHSKPVISPRAHESKIPVAKAFQKDSKEDIELFG FGSGDSDERIIDISDAGLSMGHETDGSSGSAVEYTLFPESANPSTESTSLRTRVSNSVETSRSSSGNIAQATRPTGRQPDSLERRMVVTTSKLPKPSQKA APQTRLSRLSLHNEPATTTSKFQSTATSTTHRKPTITVGSSFASSSRSTRQTGIRTERSL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G63640			P-loop nucleoside triphosphate...		Lus10032264 [exp]	0	1
AT3G57060			binding (.1.2)		Lus10039012 [exp]	2.0	0.9538
AT2G26330		QRP1, ER	QUANTITATIVE RESISTANCE TO PLE...		Lus10009790 [exp]	2.0	0.9550
AT1G63640			P-loop nucleoside triphosphate...		Lus10024628 [exp]	2.4	0.9428
AT2G19520		ATMSI4, ACG1, N...	MULTICOPY SUPPRESSOR OF IRA1 4...		Lus10011936 [exp]	3.5	0.9516
AT2G26330		QRP1, ER	QUANTITATIVE RESISTANCE TO PLE...		Lus10038071 [exp]	4.9	0.9475
AT4G18570			Tetratricopeptide repeat (TPR)...		Lus10013931 [exp]	5.0	0.9449
AT2G05760			Xanthine/uracil permease famil...		Lus10030014 [exp]	6.5	0.9407
AT3G51290			Protein of unknown function (D...		Lus10028431 [exp]	8.0	0.9400
AT3G21100			RNA-binding (RRM/RBD/RNP motif...		Lus10019042 [exp]	11.5	0.9304
AT5G27000		KATD, ATK4	KINESIN-LIKE PROTEIN IN ARABID...		Lus10018049 [exp]	11.8	0.9290

Compare expression of checked genes

Lus10032264 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.