Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G32030 106 / 1e-28 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT3G22560 98 / 2e-25 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT2G32020 90 / 2e-22 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006668 [exp] 265 / 7e-91 AT2G32030 122 / 2e-35 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10024705 [exp] 200 / 3e-66 AT2G32030 58 / 2e-11 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10039343 [exp] 185 / 3e-59 AT3G22560 151 / 1e-46 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10007013 [exp] 185 / 6e-55 AT5G64300 506 / 4e-174 RED FLUORESCENT IN DARKNESS 1, Arabidopsis thaliana riboflavin A1, ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II, GTP cyclohydrolase II (.1) Lus10010569 [exp] 172 / 3e-54 AT3G22560 144 / 7e-44 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10021914 [exp] 120 / 2e-34 AT3G22560 216 / 2e-72 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10010570 [exp] 99 / 1e-25 AT2G32030 220 / 7e-74 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10039344 [exp] 89 / 6e-22 AT2G32030 236 / 4e-80 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10041199 [exp] 77 / 3e-18 AT3G22560 128 / 7e-39 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G154700 [exp] 134 / 1e-39 AT3G22560 177 / 3e-57 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.008G154800 [exp] 116 / 9e-33 AT3G22560 225 / 3e-76 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.010G085600 [exp] 106 / 1e-28 AT2G32030 223 / 6e-75 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.007G102900 [exp] 71 / 2e-15 AT3G22560 96 / 9e-26 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10032323 pacid=23168527 polypeptide=Lus10032323 locus=Lus10032323.g ID=Lus10032323.BGIv1.0 annot-version=v1.0 ATGGCCGAGAAGAAGATTTCGTCAAGGGTAACCCTACGGCCCTTCAGATTATCGGACGCCGACGACATGTGGAGCTACCTGACGACCAACCGCGGGGAGA TGACACGTTACACGTCGTTACCGTGGAAGGAGGGTATGTTCAAGTCAAAGGAAGATGTGGAGTCGTACATACAGAAATTCTGCATCCCACAGCGTTACTG CCGGTCGATTTGCATCGACGACAGCGGCCGGTCGGTGGGGATGGTGTTAATCACCCCTGGAATCGGAAGTAGTAGTGGATCATCATCATCATCATCATCA TCATCATCATCATCATCATCATCATGGCGGAGGGGGAATATTGGAGTGCTAGTGTCGCAGGAGCATTGGTCGAAGGGAGCGTGTACGAGAGCTATGGAGA TCGCTGCGGTGGATGGGTTCCGAGCTATTCCGGAGATGGTACGGCTAGATGTATTGGCGGATGTGGAGAACAAAGGGGCGATCAAGTCTGCGGAAAGAGC CGGGTTTCAAAGGGAAGGACTGTTGAGGAAGTTTTTGTTTCATAATGGTGAAGATAGGGATATTGTTGTGTATAGCATGTTGGTTCATGATCCAAGCCGT CTTGCTTTGGTTAGTAAGTTCCGCACCACCTCCGCCGCCGCCACCATCACCTTGAAGCTTTGA
AA sequence Show only first row Show all	>Lus10032323 pacid=23168527 polypeptide=Lus10032323 locus=Lus10032323.g ID=Lus10032323.BGIv1.0 annot-version=v1.0 MAEKKISSRVTLRPFRLSDADDMWSYLTTNRGEMTRYTSLPWKEGMFKSKEDVESYIQKFCIPQRYCRSICIDDSGRSVGMVLITPGIGSSSGSSSSSSS SSSSSSSSWRRGNIGVLVSQEHWSKGACTRAMEIAAVDGFRAIPEMVRLDVLADVENKGAIKSAERAGFQREGLLRKFLFHNGEDRDIVVYSMLVHDPSR LALVSKFRTTSAAATITLKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G32030			Acyl-CoA N-acyltransferases (N...		Lus10032323 [exp]	0	1
AT1G65450			HXXXD-type acyl-transferase fa...		Lus10029920 [exp]	5.6	0.8160
AT5G11730			Core-2/I-branching beta-1,6-N-...		Lus10034348 [exp]	7.9	0.8160
AT3G53170			Tetratricopeptide repeat (TPR)...		Lus10024144 [exp]	9.7	0.7543
AT5G37060		ATCHX24	cation/H+ exchanger 24, ARABID...		Lus10031852 [exp]	9.9	0.8106
					Lus10024679 [exp]	11.0	0.7535
AT2G40190		LEW3	LEAF WILTING 3, UDP-Glycosyltr...		Lus10007909 [exp]	11.3	0.8017
AT5G45670			GDSL-like Lipase/Acylhydrolase...		Lus10011999 [exp]	13.0	0.7965
					Lus10011637 [exp]	14.1	0.7939
AT1G64160			Disease resistance-responsive ...		Lus10028749 [exp]	14.3	0.6416
AT4G02340			alpha/beta-Hydrolases superfam...		Lus10008682 [exp]	15.2	0.7923

Compare expression of checked genes

Lus10032323 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.