Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G41730 268 / 4e-86 Protein kinase family protein (.1) AT1G64300 267 / 9e-86 Protein kinase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033941 [exp] 342 / 1e-114 AT1G64300 796 / 0.0 Protein kinase family protein (.1.2) Lus10041114 [exp] 182 / 1e-53 AT1G64300 600 / 0.0 Protein kinase family protein (.1.2) Lus10036439 [exp] 179 / 2e-52 AT1G64300 599 / 0.0 Protein kinase family protein (.1.2) Lus10032357 [exp] 70 / 5e-14 AT1G64300 581 / 0.0 Protein kinase family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G137000 [exp] 275 / 1e-88 AT1G64300 781 / 0.0 Protein kinase family protein (.1.2) Potri.014G095200 [exp] 232 / 1e-72 AT1G64300 749 / 0.0 Protein kinase family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06760 [flax] [poplar] DUF1221 Protein of unknown function (DUF1221)
Representative CDS sequence Show only first row Show all	>Lus10032356 pacid=23168669 polypeptide=Lus10032356 locus=Lus10032356.g ID=Lus10032356.BGIv1.0 annot-version=v1.0 ATGGAGCAGTTCAGGCATGTAGGGGAAGTCCTGGGAAGCCTGAAGGCATTAATGGTGTTACAGGACAACATCCCGATCAATCCTCGGCAATGCGGGCTGC TGCTGCAAATGTTCACTTCAGCATTCGACGTGATAGCCGAGGAGATCAAGCACAATCTGACGCTTGAAGAGAAGAGCACAAAGTGGAAGCCATTGGAGGA GCCGTTGAGGGAGCTTTACAGGGTGTTCAAAGAAGGGGAGCTCTACGTCAGGCATTGCATGGACAACAAAGATTGGTGGGGGAAAGTGCTTTCTCTCCAT CAGAACAAGGACTCCGTCGAGTTCCACATCCATAACTTGATCGCCTGTTTCCCCGCTGTGATCGAGGCGATCGAGACTGCCCGCGAGATCCCGGGGCTAG ATGAAGCTGACATGAAGAGGAAGAGGGTGATGCTGTCGAAGAAGTACGATAGGAGCTGGTACGATCCGAAGCTGTTCCAATGGAGGTTCGGGAGGCAGTA TTTGAAAGAAAGAAGCTCCCGCCGCCTCTCCCCCCCCAAATGCGGTGCCCGTCTTTTCCCCCGCTGTGTCCGAGGCGATCGAGACTGCAGGAGAGATCTC AGGGCTCGATGA
AA sequence Show only first row Show all	>Lus10032356 pacid=23168669 polypeptide=Lus10032356 locus=Lus10032356.g ID=Lus10032356.BGIv1.0 annot-version=v1.0 MEQFRHVGEVLGSLKALMVLQDNIPINPRQCGLLLQMFTSAFDVIAEEIKHNLTLEEKSTKWKPLEEPLRELYRVFKEGELYVRHCMDNKDWWGKVLSLH QNKDSVEFHIHNLIACFPAVIEAIETAREIPGLDEADMKRKRVMLSKKYDRSWYDPKLFQWRFGRQYLKERSSRRLSPPKCGARLFPRCVRGDRDCRRDL RAR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G64300			Protein kinase family protein ...		Lus10032356 [exp]	0	1
AT1G31130			unknown protein		Lus10018940 [exp]	8.7	0.7793
AT5G51060		ATRBOHC, RHD2	ROOT HAIR DEFECTIVE 2, A. THAL...		Lus10022434 [exp]	21.6	0.7713
AT5G40760		G6PD6	glucose-6-phosphate dehydrogen...		Lus10032079 [exp]	30.9	0.7649
AT1G64300			Protein kinase family protein ...		Lus10032357 [exp]	31.2	0.7775
AT3G22260			Cysteine proteinases superfami...		Lus10027312 [exp]	44.2	0.7411
AT5G15080			Protein kinase superfamily pro...		Lus10030668 [exp]	55.6	0.7552
AT4G00750			S-adenosyl-L-methionine-depend...		Lus10041366 [exp]	56.4	0.7632
AT4G03230			S-locus lectin protein kinase ...		Lus10033742 [exp]	67.4	0.7043
AT1G54130		AT-RSH3, RSH3, ...	RELA/SPOT homolog 3 (.1)		Lus10001862 [exp]	68.6	0.7452
AT1G03080			kinase interacting (KIP1-like)...		Lus10014687 [exp]	89.6	0.7398

Compare expression of checked genes

Lus10032356 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.