Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G55230 846 / 0 ATMAP65-1 microtubule-associated proteins 65-1 (.1.2) AT4G26760 813 / 0 MAP65-2 microtubule-associated protein 65-2 (.1) AT1G14690 460 / 8e-155 MAP65-7 microtubule-associated protein 65-7 (.1.2) AT2G01910 453 / 4e-152 ATMAP65-6 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) AT1G27920 432 / 1e-144 MAP65-8 microtubule-associated protein 65-8 (.1) AT5G51600 432 / 1e-142 ATMAP65-3, PLE PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) AT2G38720 414 / 3e-137 MAP65-5 microtubule-associated protein 65-5 (.1) AT5G62250 379 / 8e-124 MAP65-9 microtubule-associated protein 65-9 (.1) AT3G60840 374 / 7e-121 MAP65-4 microtubule-associated protein 65-4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10043178 [exp] 1122 / 0 AT5G55230 847 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10008705 [exp] 495 / 6e-169 AT2G38720 565 / 0.0 microtubule-associated protein 65-5 (.1) Lus10026114 [exp] 487 / 1e-165 AT2G38720 553 / 0.0 microtubule-associated protein 65-5 (.1) Lus10031939 [exp] 473 / 9e-160 AT2G01910 838 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10035099 [exp] 467 / 4e-157 AT2G01910 822 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10015684 [exp] 471 / 5e-157 AT5G51600 759 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10041635 [exp] 462 / 3e-156 AT2G38720 550 / 0.0 microtubule-associated protein 65-5 (.1) Lus10037691 [exp] 464 / 1e-154 AT5G51600 768 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10015789 [exp] 449 / 2e-150 AT1G27920 673 / 0.0 microtubule-associated protein 65-8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G356500 [exp] 898 / 0 AT5G55230 853 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.011G092500 [exp] 876 / 0 AT5G55230 863 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.003G192400 [exp] 529 / 0 AT2G38720 555 / 0.0 microtubule-associated protein 65-5 (.1) Potri.008G139700 [exp] 473 / 8e-160 AT2G01910 778 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Potri.015G131400 [exp] 473 / 2e-158 AT5G51600 728 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.003G173300 [exp] 464 / 2e-156 AT1G27920 655 / 0.0 microtubule-associated protein 65-8 (.1) Potri.001G055100 [exp] 452 / 2e-151 AT1G27920 623 / 0.0 microtubule-associated protein 65-8 (.1) Potri.012G129600 [exp] 452 / 6e-150 AT5G51600 761 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.014G070100 [exp] 410 / 4e-134 AT5G51600 451 / 5e-149 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.006G269800 [exp] 158 / 2e-45 AT5G51600 186 / 2e-56 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03999 [flax] [poplar] MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family)
Representative CDS sequence Show only first row Show all	>Lus10032567 pacid=23146294 polypeptide=Lus10032567 locus=Lus10032567.g ID=Lus10032567.BGIv1.0 annot-version=v1.0 ATGATAACGGTTGACTGGAGAGAGAAAACGGCGAGCCAGTCAAAGCAAGCAGGAGGAAACGGAGACGAGTCACGCCAGTTAGGCAGTGTCACGCTGGTAA ATAAGCCGATAAAATCGGGGCATTTTCCAGGCCAGACTGACAACCAGAAGGAATGCAGCAGCATTCCACAGCACTCCTTCCCTCTGACCTCTGCTGCTTC ACGAACATTGAGACACTGTAAAGTTTTTGGACTTGGAAGTTTGATGGCACTGACAGACACTCAGAACCCTCTAGTTGCACAAGTGACCTGCGGTACTTTG CTGCAGAAGCTTCAGGAAATTTGGGATGAAGTTGGCGAAAATGACGAGGAGAGGGATAAGATGCTTCTTCAGATTGAGCAAGAATGCTTAGATGTGTACA AAAGGAAGGTTGAGATGGCAGCACATTCAAGGGCAGAGCTTCTGCAAACTCTCTCGGATGCCACCATAGAGCTTTCCACCCTCTTATCTTCACTAGGAGA CAAAACTTCGGTTGGAATCCCTGAAAAGACTTCCGGAACGATCAAGGAGCAACTTGAAGCCATAGCACCAGCGCTCGAGCAGTTGTGGAAACAGAAAGAA GAGAGAGTGAATGAGTTCTCAGATGTGCTGTCACACATACAAAAGATTTGTGGAGAAATTGCTGGGAGTGTAAACTCTGATGGGGCTCCTGCAGTTGATG AATCTGATCTATCCTTGACGAGGTTGGATGAATATCATGCTCATCTACAAGAACTCCAGAAGGAGAAGAGTGAGAGATTGCACAAGGTCCTTGAATTTGT TAGCAGTGTGCATGATCTCTGTGCTGTTCTGGGTTTGGACTTCTTTAGCACTGTTACTGAAGTTCATCCTAGCTTGAATGACTCTACTAATGTTCAATCC AAAAGTATTAGCAACGATACTTTGTCAAGGTTGGCTAAGACAGTCCTGGAGTTAAATAACGATAAGAAACAAAGGCTGCATAAACTCCAAGAATTAGCAA CTCAGCTCACTGATCTGTGGAACCTGATGGATACTCCTGCGGATGAAAGGAAATTGTTTGCCCATGTTACGTGCAACATTTCAGCTACAGTTGATGAAGT GACTGTGCCTGGTTCTCTTGCACTAGATCTCATTGAACAGGCTGAAGTTGAAGTAGAGAGGCTTGATCTGCTAAAGTTCAGCAGGATGAAGGAAATCGCC TTCAAGAAGCAATCAGAACTAGAAGAGATCTATACTCGGGCTCATATCGAGATTGATCCCGAGGCTGCTCGTGAAAGAATTATGGCATTGATCAATTCTG GGAATATTGAGCCCACTGAGTTACTGGCTGACATGGATAGTCAAACATCAAAAGCCAAAGAAGAAGCTCTTAGCAGGAAGGAAATTTTGGACAAGGTGGA GAAATGGATGTCTGCATGTGAAGAAGAAAGCTGGCTTGAAGACTATAATCGGGATGATAACAGGTATAATGCAAGCCGAGGTGCACACTTGAATCTCAAG CGAGCAGAGAAAGCCCGAATTCTAGTCAACAAAATTCCAGCTCTGGTGGACTCCTTGGTTGCTAAAACTCGGGCATGGGAAGAGGAACGCGAGCTTCAGT TCACTTACGATGGCGTTCCTCTTCTTGCTATGCTCGATGAATACGCCATGCTTAGGCAAGAACGAGAAGAGGAGAAGCGTAGGATGAAAGATCAGAAGAA GCACCAGGAGCTGCAAAGCACAGATCAAGAAGGTGCATTTGGGTTAAGGGCGAGCCCTGCTCGGCCAGTGAGTGTGAAGAAGGTGGCAGGACCTCGAACA AATGGTGCCAATGGTGGAACTCCAAGCAGGCGGCTGTCGATGAACACTACTCAGAATGGCGGCAGCAGATCGGGAGCAAGTAAAGACCGAAAGGAGGCGA GGATGTCTGCTCCTCCGAGTAACCACCATGTCGCAGTGTCGAAGGAAGTTGATGATGTGTCTCATGCTTCCGGTACTGAGCCGATTCCAGCTTCTCCGTA G
AA sequence Show only first row Show all	>Lus10032567 pacid=23146294 polypeptide=Lus10032567 locus=Lus10032567.g ID=Lus10032567.BGIv1.0 annot-version=v1.0 MITVDWREKTASQSKQAGGNGDESRQLGSVTLVNKPIKSGHFPGQTDNQKECSSIPQHSFPLTSAASRTLRHCKVFGLGSLMALTDTQNPLVAQVTCGTL LQKLQEIWDEVGENDEERDKMLLQIEQECLDVYKRKVEMAAHSRAELLQTLSDATIELSTLLSSLGDKTSVGIPEKTSGTIKEQLEAIAPALEQLWKQKE ERVNEFSDVLSHIQKICGEIAGSVNSDGAPAVDESDLSLTRLDEYHAHLQELQKEKSERLHKVLEFVSSVHDLCAVLGLDFFSTVTEVHPSLNDSTNVQS KSISNDTLSRLAKTVLELNNDKKQRLHKLQELATQLTDLWNLMDTPADERKLFAHVTCNISATVDEVTVPGSLALDLIEQAEVEVERLDLLKFSRMKEIA FKKQSELEEIYTRAHIEIDPEAARERIMALINSGNIEPTELLADMDSQTSKAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDDNRYNASRGAHLNLK RAEKARILVNKIPALVDSLVAKTRAWEEERELQFTYDGVPLLAMLDEYAMLRQEREEEKRRMKDQKKHQELQSTDQEGAFGLRASPARPVSVKKVAGPRT NGANGGTPSRRLSMNTTQNGGSRSGASKDRKEARMSAPPSNHHVAVSKEVDDVSHASGTEPIPASP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G55230		ATMAP65-1	microtubule-associated protein...		Lus10032567 [exp]	0	1
AT4G17240			unknown protein		Lus10038797 [exp]	2.4	0.9273
AT3G07170			Sterile alpha motif (SAM) doma...		Lus10038185 [exp]	2.8	0.9082
AT1G44110		CYCA1;1	Cyclin A1;1 (.1)		Lus10028544 [exp]	4.5	0.9230
AT1G77620			P-loop containing nucleoside t...		Lus10035108 [exp]	9.5	0.8954
AT4G31880			unknown protein		Lus10018332 [exp]	11.1	0.9103
AT1G08010	GATA	GATA11	GATA transcription factor 11 (...		Lus10037398 [exp]	11.9	0.8601
AT5G46290		KAS1, KAS I, KA...	KETOACYL-ACP SYNTHASE 1, 3-ket...		Lus10040883 [exp]	13.1	0.8923
AT3G21060		RBL	RbBP5 LIKE, Transducin/WD40 re...		Lus10025693 [exp]	13.4	0.8933
AT3G52170			DNA binding (.1.2)		Lus10017453 [exp]	13.9	0.8707
AT1G67590			Remorin family protein (.1.2)		Lus10015817 [exp]	15.3	0.8709

Compare expression of checked genes

Lus10032567 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.