Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G55860 4043 / 0 UPL1 ubiquitin-protein ligase 1 (.1.2) AT1G70320 4016 / 0 UPL2 ubiquitin-protein ligase 2 (.1) AT3G17205 241 / 2e-64 UPL6 ubiquitin protein ligase 6 (.1.2.3) AT3G53090 198 / 2e-50 UPL7 ubiquitin-protein ligase 7 (.1.2) AT4G12570 161 / 2e-39 UPL5 ubiquitin protein ligase 5 (.1) AT5G02880 152 / 4e-36 UPL4 ubiquitin-protein ligase 4 (.1) AT4G38600 124 / 1e-27 UPL3, KAK UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032830 [exp] 1091 / 0 AT1G55860 1189 / 0.0 ubiquitin-protein ligase 1 (.1.2) Lus10002605 [exp] 1041 / 0 AT1G55860 1128 / 0.0 ubiquitin-protein ligase 1 (.1.2) Lus10035589 [exp] 196 / 7e-50 AT3G53090 1385 / 0.0 ubiquitin-protein ligase 7 (.1.2) Lus10010493 [exp] 181 / 1e-45 AT4G12570 830 / 0.0 ubiquitin protein ligase 5 (.1) Lus10017098 [exp] 167 / 6e-41 AT3G17205 1249 / 0.0 ubiquitin protein ligase 6 (.1.2.3) Lus10008636 [exp] 150 / 1e-35 AT3G53090 1270 / 0.0 ubiquitin-protein ligase 7 (.1.2) Lus10019908 [exp] 142 / 4e-33 AT4G38600 1545 / 0.0 UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2) Lus10003792 [exp] 130 / 1e-31 AT4G12570 409 / 3e-136 ubiquitin protein ligase 5 (.1) Lus10027841 [exp] 126 / 4e-28 AT4G38600 2482 / 0.0 UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G368600 [exp] 4928 / 0 AT1G55860 4297 / 0.0 ubiquitin-protein ligase 1 (.1.2) Potri.011G094100 [exp] 4876 / 0 AT1G55860 4187 / 0.0 ubiquitin-protein ligase 1 (.1.2) Potri.002G110500 [exp] 1093 / 0 AT1G55860 1125 / 0.0 ubiquitin-protein ligase 1 (.1.2) Potri.010G150000 [exp] 236 / 1e-62 AT3G17205 1506 / 0.0 ubiquitin protein ligase 6 (.1.2.3) Potri.008G101300 [exp] 229 / 1e-60 AT3G17205 1432 / 0.0 ubiquitin protein ligase 6 (.1.2.3) Potri.016G096500 [exp] 207 / 2e-53 AT3G53090 1447 / 0.0 ubiquitin-protein ligase 7 (.1.2) Potri.016G012900 [exp] 168 / 2e-41 AT4G12570 853 / 0.0 ubiquitin protein ligase 5 (.1) Potri.006G011701 [exp] 166 / 5e-41 AT4G12570 842 / 0.0 ubiquitin protein ligase 5 (.1) Potri.004G174700 [exp] 138 / 6e-32 AT4G38600 2241 / 0.0 UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2) Potri.009G134300 [exp] 136 / 2e-31 AT4G38600 2234 / 0.0 UBIQUITIN-PROTEIN LIGASE 3, KAKTUS, HEAT repeat ;HECT-domain (ubiquitin-transferase) (.1), HEAT repeat ;HECT-domain (ubiquitin-transferase) (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06012 [flax] [poplar] DUF908 Domain of Unknown Function (DUF908) CL0552 [flax] [poplar] Hect PF00632 [flax] [poplar] HECT HECT-domain (ubiquitin-transferase) CL0552 [flax] [poplar] PF06025 [flax] [poplar] DUF913 Domain of Unknown Function (DUF913) CL0214 [flax] [poplar] UBA PF00627 [flax] [poplar] UBA UBA/TS-N domain
Representative CDS sequence Show only first row Show all	>Lus10032589 pacid=23146334 polypeptide=Lus10032589 locus=Lus10032589.g ID=Lus10032589.BGIv1.0 annot-version=v1.0 ATGAAGCTCAAGCGTCGGAGGTCTTTGGAAGTGCCTACCAAAGTTAAATCCTTCATCAATGATGTCACTGCTGTTCCTCTGGAGCAAATAGAAGAGCCTC TGAAGGGTTTTGCTTGGGAGTTTGACAAGGGGGATTTTCATCATTGGGTTGATCTTTTCAACCATTTTGATTCATTCTTTGATAAGCACATAAAACCGAG AAAAGAGTTGCAGCTTGACGGAAGTTTTCTGGAATCTGATGCTCGTTTCCCTCGAGAAGCAGTTCTTCAGATCCTTCGTGTTATCAGGATAATTTTAGAG AATTGCACGAATAAGCACTTTTATAGTTCTTATGAGCAGCATCTTTCAGCTCTTCTTGCTTCAACAGATGCGGAGGTGGTTGAGTCTTGTCTGCAGACTC TGGCTGCTTTCCTAAAGAAAACTATTGGAAAGTACTCCATTCGGGATGCTTCTTTGAATGCAAAACTATTTTCTCTTGCGCAAGGCTGGGGTGGAAAGGA GGAAGGTCTTGGTTTGGTTGCGTGTACTGTAGACAATGGGTGTGATCCTGTAGCATATGACTTAGGCTGCACCCTCCACTTTGAGTTCTATGGACTGGAC GAGTCACAAAGTGAGTCTCAACGGGCAGAACAGTCAACCCAAGGGTTACACATTATTCATTTACCTAACACCATTACCCTCCCGGAGACAGATTTAGAAC TTTTGAACAAGTTGGTCGCGGAGTATAAAGTGCCTCAGAGTTTGAGATTTCCACTATTGACACGATTACGTTTTGCAAGGGCTTTTGGATCTTTGGCTTC ACGACGGCAGTACACATGCATTCGTCTATATGCCTTCATTGTTCTTGTTCAAGCAAGTAGTGATGCTGATGACCTAGTTTCTTTTTTCAACTCTGAGCCA GAGTTTGTAAATGAACTAGTATCCTTATTAGGATATGAAGATGCAGTTCCAGAGAAAGTTCGGATTCTTTCTCTTTTAGCTTTAGTTGCTCTTTCTCAGG ATCGCTCCCGCCAGCATAGTGTCTTAGCCGCTGTCACATCTGGTGGTCATCGTGGCATTCTATCCAGCCTTTTGCAGAAAGCTATTGATTGTGTTGTTAA TCGGACATCAAAATGGTCTGTTGTTTTTGCTGAGGCATTGTTATCTTTAGTCACGGTATTGGTCTCATCATCATCTGGCTGCTCAGCCATGCGTGAGGCG GGATTCATCCCTACTCTTCTACTTCTGCTCAAGGACACAGATCCTCAGCATTTGCATTTAGTTAGCACTGCTGTTCATATTTTGGAAGCCTTTATGGACT ACAGTAACCCAGCTGCTGCATTGTTCAGAGAGTTGGGTGGTTTAGATGATACCATTTCACGTCTGAAGGTAGAAGTCTCTTATATAGAAAACAGCCAGAT GCCTGAAGATTCTGATTCCAGGGGAAGGAGTTTACCAAATGTTGAAGGTGCTTCTTCTGACCTGGATGATATGCGACCCCTGTATTCTGAGGCATTGGTT TCATATCACCGGCGTTTGCTCATGAAAGTACTCTTACGTGCTATATCGCTAGGAACATATGCTCCAGGAAATACTTCTCATATCTATGGATCTGAAGAAA ACGTGCTGCCACAATGCTTGAGTATCATATTTAGAAGAGCTAAAGATTTTGGCGGTGGGGTGTTTTCACTTGCAGCGACAGTAATGAGCGATCTTATTCA TAAGGATCCTACCTGTTTCTCTGTCCTAGATGCAGCTAACCTACCTTCTGCATTTATGGATGCTATAATGGATGGGGTAATATGCTCTGCTGAAGCCATA ATTTGCATACCCCAATGCTTGGATGCATTGTGCCTGAATAACAATGGGCTGCAGGCAGTAAAAGATCGCAATGCTTTGAGGTGTTTTGTCACGATTTTTA CATCCAGATCATATTTGCGTGCTCTTACGGGAGAGACTGCTGTGTCCTTGTCCAGTGGGTTGGATGAGCTCATGCGCCATGCTTCTTCCCTTCGTGGGCC TGGAGTGGATATGTTGATCGAGATTTTGAGTAACATTGCACGATTAGGTTCTGTGGCTGATGGTTCTTCCTTGGCCGGATCTTCGTCGGATGCTTCTTTC ACAGCAGCTGATGTTCCGAGCAGCTCTGCTGCTGTTCCTATGGAAACTGATGCTGAGGAGAGGAGTCCAGTTCTCGATGAAGGCAAGGGAGTTGCAAAGA TGGAGAGATCAGAGCAGTCTGTTGATCAGTCGTCTGATGCTTTCATAGTGAATGTAGACACCTTCCTTCCAGATTGTGTGGGGAATGCTGCTCGTCTTCT TGAAACAATTCTTCAAAATGCGGATACTTGTCGTATTTTTGTAGAGAAGAAGGGAATAGATGCAGTCCTGAATTTGTTTTCCTTGCCTTTGATGCCTGTC ACATCATCTATTGGTCAGAGTATCTCCATTGCATTTAAGAACTTTTCACCTCAACATTCTGCACCTTTAGCCCGGGCAGTATGCTCTTTTTTTAGAGATC ATGTAAAGTCAACTAATGAACTTCTAGATGCAGTTAGAGGCACTGAACTTGCTGCAGTAGACTCTGCCAAGCAAACTACGATTTTGAAGCACTTATCTAG CCTTGAGGGTATATTGTCTTTGTCAAATCTGTTATTGAAAGGCACTGCTAGTGTGGTCTCTGAACTAGGTACTGCAGATGCTGAAGTCTTGAAGGATCTT GGGAGGACGTACCGGGAAATAATGTGGCAAATATCTGTGTACAATGACTCCAAATTAGAAAAGAAGAGGAGTGAAGAGCCAGAAATGGAAAGTGCAGATG GGTTGCCATCTAATGGTGTAGGAAGAGAGAGTGACGAGGATGCCAGTATCGCAGCTGTTAGGTATATGAACCCAGTTTCTATCAGGAGCAATTCTCAATC CTTTTGGGGTGGAGAACGTGATTTTCTGTCAGTTCTTCGAAATGGAGAAGTATTACACCGTCGTAGTAGAAATGGTTTGGCACGTATGCGGGGTGGGAGG AGTGGTCGACACTTGGATGCTTTAAATACAGATTCCGAGGCTGTGTCCAATGCATTTGAGGCATCTTCTCAGGAGGTTAAGAAGAAGAGCCCTGAGGTTC TTGTTGCGGAAATTCTGAACAAGCTGGTTTCCACGTTGCGCTCGTTCTTTACAGCACTCGTTAAGGGATTTACTTCACCAAACCGTCGTAGAGCTGATGT GGGTTCGTTAGCTGCAGCTTCTAAGACGCTTGGTTCTAGCTTAGCTACAATGTTTCTTGAGGCTCTTAGCTTTCCTGGTTATTCTACTGCTGTATCAGTC AAGTGCCGGTATCTTGGAAAGATTGTGGATGATATTGCAGCACTCACATGCGATAGCAGACGACGTACTTGTTATACAATAATGGTAAACAATTTCTACG TCCATGGAACCTTCAAGGAGCTCCTAACTACTTTTGCAGCAACGAGTGAATTGTTGTGGACATCTCCATATCCATACTCTACTTCAGGTGTCGATGAAGA GAAGGCAACAGATGGGGGGAATAAACTGTCCAACTGTGCATGGCTGCTAGACACATTGCAGATATATTCTCGCGTGCTGGAGTATTTTGTCAACTCCACA TTAATTTTATCTCCAGGCTCTTCATCCCAGGCTCAGTTACTAGTTCAACCAGGTGCAGTTGGCTTATCTATTGGGCTGTATCCTGTTCCTAGGGATCCTG AAGCTTTTGTTCGAATGTTGCAATCTCAGGTTCTTGATGTAATACTTCCTGTTTGGAACCACCCTAGGTTTCCAAACTGTAGCCCTGCTTTCACTGCATC TATCATTTCACTTATAACACATATATACTCTGGTGTGGGGGACATCAAAACGAGTCGTAGTGGGGCTGCAGGAAGTGCAAATCAAAGGTTCATATCCCCG CCACCCGATGAAGCTACTATTGCAACCATTGTTGAGATGGGATTCTCAAGGGCAAGAGCAGAGGAAGCATTGAGACGAGTGGACGCAAACAGTGTTGAAA TGGCTATGGAGTGGTTGTTTACTCATGCTGAGGATCCTGTGCAGGAAGATGATGAACTGGCTCGTGCACTTGCGTTATCACTTGGAAGTTCATCGGAGGT ATCGAAAAATGATAATGTTGATAAGTCTGTTGATGTGCTGACAGAAGTGCCAATCAAGATGCCTCCTGTTGATGATATGCTTGCTGCATCTGTCAAGTTG TTTCGGAGTAATGATGCAATGGTGTTCTCATTTATAGATTTGCTTGCGACTCTTTGCAATCGGAACAAGGGAGAAGACCGTCCAAAGGTTGCATCTTATC TTTGCGAGCAGTTAAAGCTTTGTCCTTTGGAGTTTTCAAAAGATTCCAGTGCATTGTACATGATATCACATATTTTGGCAGTAATCCTTCACGAGGATGG AAATATGAGGGAGATCTCTGCACAAAATGGTATTGTATGCACGGTAACTAATATCTTGACAGATTTCAAGGCCAAAAGTTCCACAGGTTGTGAAATTCTT GCCCTGAAATGCATTGGTGCTTTGCTGCTTATCTTGGATTGCATGCTACAATCAAAGCCTAAAAATCCTCCAGATACTATTGAAGGAAATCTGAAAGCAT CGACATTAGACTCACCAAATCCTGATAAAACGTCTTCAGATGTCTCTGGAAAAGAATCTGACACTGTATATGAGAGAATATTAGGAAAGTCTACTGGTTA CATGACTATGGAAGATAGTGAAAAAGCATTGTTAATTGCTTGCGACTTGATAAAGCAGCATGTTCCAGCATTCATTATGCAGGCTGTCCTACAGTTATGC GCTCGCTTGACAAAAACGCATGCTTTGGCATTGCAATTTCTTGAAAATGGAGGATTAGCTGCTATTTTTAGTCTACCAAGAAGTTGTTTCTTTCCTGGAT ATGACACTGTTGTGTCTGTAATTGTCCGTCATCTTCTTGAGGATCCTCAGAGTTTACAAATAGCTATGGAACTGGAAATACGACAAACTTTCAGTGGAAA TCGGAATGCTGGGCGGATTCCACCTCGGACATTTTTGACATCAATGGCTCCTGTTATTTCAAGAGATCCTGTGGTTTTCATGAAGGCAGCAACTGCAGTT TGTCGATTGGAGTCTTCTGGTGGGAGGACCTTCGTAATTTTGTCAAATGAAAAAGACAGGGACAAAGAGAAATCGAAAGTATCAGGGGGTGAAGAATCTC TTCGGGTTTCTGAATCTAAGATTCATGATAGTTCAGTTAAATGCATCAAAGGTCATAAGAAGATTCCTCTGAATCTGACTCAAGTTATTGAGCAGCTTCT TGACATAGTGTTGAATTACCCTTTCTCAGAAATCCAAAATGAAGTTTGGGGCGAATCAAATCCTATGGAAATTCATGGATCTGCCAGCACTATGAAGGGA AAGTCTAAGGTTGACGAGACACAGAAGATACAATCAGAGGCCGAAAGATCTGCCGCATTGGCAAAGGTCACTTTTGTCCTTAAACTATTGAGTGATATAC TGCTCATGTATTTGCATGCTGTTGGTGTCATACTAAGGAGAGACTCTGAATTGTGTCAACTCCGCTCATTCAACGAAATTGATAACCCGAATCATGGGGG AATAATCTACCATGTTTTACATCGGTTGCTTCCGGTGTCTACAGATAAATTTGCAGGACCTGATGAATGGAGAAACAAGTTGTCAGAAAAAGCTTCATGG TTCTTGGTAGTATTGTGTGGTCGATCTAGTGAAGGGCGGCGGAGAGTAATTAATGAACTTGTGAAGGCTATGGCTTCCATCTCAAACACGGGAAATAATT CAAACAAAAGCAGTTTATTACCAGACAAAGTAATGTTTGCATTTGCAGATTTGGTTTACTCTGTGTTGTCAAAGAATGCTTCCTCAAGCACGTTACCGGG GTCTGGGTGCTCTCCGGACATAGCAAAAAGCATGATAGATGGTGGCGTTGTGCATTGTCTCACTGGCATTCTTCAAATGATCGACCTCGACCATCCTGAT GCTCCGAAGACTGTTAATCTTCTACTTAAATCTTTGGAAAGCTTAACAAGAGCTGCTAATTCCAGCCGGCAAATTCAGAAAATTGAGGAGTTAAACAAGA AGGAAACTACAAGTTCAAACCGAAGACTTGATGGTCAGACAGCAAGCCTTGCTGCTGATACTGCAGGGCTTAATTCGAATATCAGTGCTACCCTGGAGGT TCCAGGTGTTGAAGAGGCTGAAGAATTGCATCCTCAAGGAACTGCAGAAGTTGAGGGCAGTGGCGATGCACTTGCAAATCAGCCTGGAGAACAAGGCATG AGGATAGAAGTGGTAGAAGGAACTAACCCTTCCCTTGAGATGAGGATGGGTTTTATGCGGGGAGAAATGGAAGGAGCAGATCAAATTGAAATGACTTTTA GGGTTGAGAATAGAACAAATGATGACATGGGTGATGAGGATGATGACATGGCCGATGAAGGTGAGGACAACGAAGATGACGATGACGACGGTGAGGATGA AGACGAAGATGTTGCTGAAGATGGTGGTGGAATGATGTCTCTGGCAGACACAGATGTTGAAGACCACGATGAGACTGGTTTGGGTGATGCTTATAATGAC GATATGATGGATGAAGAGGATGACGATTTTCACGAGAACCGCGTCATAGAGGTGAGATGGAGGGAAGCCCTTGATGGTTTAGATCGGCTTCAGGTGCTTG GTCAACCCGGTGGTGGAAGTGGTCTAATTGATGTTGCAGCTGAACCCTTTGATGGGGTTAACGTGGATGATCTTTTTGGCCTGCGCAGGCCTTTGGGTTT GGAACGTCGGCATCCAGGTGGTAGGTCTTCTTTTGATCGACCAGTCCCTGAAGTGGATGGATTTCAGCATCCTTTGCTCTCGAGACCATCCCAGTCCGGA GGTCTTCTTTCTATTTGGTCGTCCGGTGGCCATTTATCCAGAGATTTAGAAGCTCTGTCAGCTGGAAATTCTGATGTTTCCCAATACTATATGTTTGATG CACCAGTACTTCCATATAATGGTGATCGGTTGGGCAGTGCGGCTCCTCCACCTTTAACTGATTATTCTGTTGGCATGGACTCTTCACACCTACAGGGCCG CAGAGGGCTAGGTGATGGACGTTGGACTGACTATGGTCAGCTGCAACCAGGTGCCCAAGCTTCTGTGATAGCGCAAGCAGTGGAGGAACAGTTCCTTTCT CAGTTGGATACTGTTGGCCCAACACCAGGTGGCTCTGCCGAAAGGGAGCCCCAGAACATGGAAATGCAAGAGAATCAACCATCTGTAGCACCTCATCCGA ATGATGGTCAAGTAGTCACTGAAGACAATAGTTCCAGAATACTGCCGGCTGAAGTTCCTCAACAAGAATCTGCTTTTGAAGAAGAGAACGATGTTGAGGC TTTACAGTTGCAGGAAGGAATGGTGGATCAAACATTATCTCAGAGCAATACACATAATGTGGAAGATGGAATGGAGGTTGGGGAAGGTGATATCATGACC AGTGACCCTGCACAGCCACTTCCAGAGCCAATAGACTCATCTGCACAGCATTATCCTCTTTTGCAACATGAAGTTGGTCAAGAGTCTCCATTAAATATTC AGATTTTGCCTGCTCAGATTCACGATCATGGTGGCTCATCAAGGGATGATACTAGTGATGATGTTGATATGGGTGGTGCTGGTGAGCAATCTCTGCCTGT TCCAGAACATGCTGTGGACAATCAATCCTCCATTCAAGAAACAGTAGTTGCTCTGGGCGCTAATCAGACTGATCAGAATAGTTTAAATAGTGAAGCTTCT GCTGCGAATGCTATTGACCCTACTTTTTTGGAGGCACTACCTGAAGAGTTGCGGGCAGAAGTTCTTGCTTCCCAGCAAGTTCAGTCTGTGCAGCCTCCAG TATATGCACCGCCTTCAGTTGATGATATCGATCCTGAGTTCTTGGCTGCTCTTCCTCCGGAAATTCAGGCAGAAGTCCTGGCACAACAAAGAGCACAGAG AATCACCCAGCAAGCTGAAGGGCAGCCTGTGGATATGGATAATGCTTCCATAATAGCTACCTTCCCTGCTGATCTACGTGAGGAGGTTCTTTTGACGTCC CCAGAAGCAGTCCTATCAGCACTCCCTTCTCCATTGCTTGCTGAAGCCCAAATGCTAAGGGACAGGGCAATGAGTCACTATCAGGCTCGGAGCCTGTTTG GAAGCAGCCATAGGCTTGGTGTTCGCAGAAATGGTTTAGTGTTTGACAGGCAGACTGTAATGGACAGAAGTGTTGGAGTCTCAATAGGTCGGAGAGCAAC ATCTTCCATTGTTGATGGTATGAAGGTGAAGGAGATTGAGGGCGAGCCTTTGCTGGATGCAAATGCACTGAAGGCTTTGATCCGCCTCCTAAGATTGGCC CAGCCCCTTGGGAAAGGCCTACTGCAGAGACTTCTGTTAAACCTCTGTGCTCATGGTTCTACAAGGGCAACTTTAGTTCGTCTGTTGGTTGACATGATTA AACCTGAAGCAGAGGGATCACTAGGTGGATTAGCAAAAATTAACTCCCAGAGGCTTTATGGCTGCCAGTCAAATGTTGTTTATGGCCGATCACAGTTGTT GGACGGTGTACCTCCCTTGGTGGTGTGCCGGATTCTCGAAGTTTTCACATACTTGGCAACAAATCATTCATCGATTGCCAACATGTTATTTCACTTGGAT CCTTCTGTTGTTCCAGATTCCTTGAGGGTAAATAGCTCCGAATCTGTGATGGACAAAGGTAAAGGGAAAGTTGAGGATGGTGGTGTTGTATTTAAGCCCA GCGGAGATCCAGATGACGTTCCATTGATTCTGTTCTTGAAGCTTTTAGATCGACCACTGTTTTTCCGCAGCACTGCACACCTTGAGCAGGTTATGGGATT ACTTCAAGTGGTAGTTTATGCAGCAGCATCAAATTTAGAATCCCAGGCCCAATTGGGACATGTGACAGATAACTCCCATAAGTTAACGAGTGGTGAAGTC ACTGATGATGTTCAAACGGACAATCAGTTGGAACAAGAATCTACGCAGGCAGATAGAACTGTCGCGGCCGAGTCTTACATTTCCAATGGGAAGAAAAGCA CTCATACACTCGGAGTTTTCATGCGGTTGCCACGATCTGATCTACGGAATCTAAGTAACCTTCTTGGTCGCGAGGGGTTGTCAGATAAAGTTTACATGCT CTCTGGAGAAGTACTGAGAAAGCTGGCATCAGTCTCTGCCCCCCTTCGTGAGTTCTTTATGTCAGAGCTTTCAGATTTAGCACATGGCCTTAGCAGTTCA GCGGTCAGTGAGCTTGTTACCCTGAGGAAAACTAACATGCTAGGTCTTGGTTCTGGGTCAATGGCTGGAGCAGCAATATTGCGTGTGCTGCAGGCCCTTA GTTCACTCACCACACCCACCGCAGGTGTGAATGTAGATAATAAAAGTAGTGGGGGGCAGGAGCAAGAATCCGTATGGAACTTAAACACTGGACTTGAGCC ATTGTGGAATGAATTAAGTGAATGCATTAGTGTGACTGAGATGCACTTTGGTCAGGGCACATTGAACCAGACTATTTTGGGAACTAATCTTAGGGATCAG GTACCTGGTAGCGTCACTTCATCACCTCTTCCTCCTGGAAATCAGCGACTCCTGCCTTTCATAGAAGCGTTCTTTGTTTTGTGTGAAAAGCTTCAAGCAA ATAATTCTTCTGGGCAGCAAGATCATGCTGATTCAACAGTAAAGGAAGTCAAAGAGTCGGGAGCAGGGAATTATATAACCATCGCATCCGGTGGGGATTC CCAAAAAAAGCTAGATGGTGTTGCGACATTTTCAAGGTTTGCTGAGAAACATCGTCGACTTCTGAATGCTTTTATCAGACAAAATCCCGGGTTGCTGGAG AAGTCGCTTTCTATGATGCTGAAGGCTCCAAGATTAATCGACTTTGACAACAAAAGAGCATATTTTCGGTCAAGGATAAGGCAACAGCACGAGCAACACC TGTCTGGTCCACTGCGGATAAGCGTCCGAAGAGCATATGTATTGGAGGATTCATACAATCAGTTGAGGATGCGCCCTACTCCAGATCTCAGGGGACGTCT AAATGTGCAGTTCCAGGGGGAAGAAGGGATCGATGCTGGGGGTCTGACAAGAGAATGGTATCAAATATTGTCAAGGGTGCTATTTGACAAGGGAGCATTA CTCTTCACCACCGTGGGGAACAATGCAACTTTCCAGCCAAATTCCAATTCTGTCTATCAAACCGAGCATCTTTCGTATTTCAGATTTGTGGGCCGTGTGG TTGCAAAGGCATTGTTTGATGGCCAGCTCTTAGATGTATATTTCACCCGGTCTTTCTATAAGCATATTCTGGGTGTAAAGGTGACTTACCATGACATAGA GGCTGTGGATCCTGATTATTACAAGAATTTAAAGTGGATGTTAGAGAATGATGTAAGTGATATTCCAGACCTGACATTCAGCATGGATCCTGATGAGGAG AAACACATCCTTTATGAGAAGAATGAGGTTACTGATTATGAGCTTAAACCTGGAGGGAGGAATATAAGAGTGACAGAAGAAACGAAGCACGAGTATGTTG ACCTTGTTGCTGACCATATATTGACAAACGCAATCCGCCCTCAGATAAATTCCTTCCTAGATGGTTTCAACGAATTGATTCCTCGGAACCTGATTTCAAT TTTTAACGATAAAGAGCTGGAGCTACTAATCAGTGGGCTCCCAGAAATTGACTTGGAAGATCTGAAAGCCAATACAGAGTATACTGGATACACTGCTGCT TCCAGTGTTGTTCAGTGGTTCTGGGAGGTGGTTAAAGATTTTAGCAAGGAAGACATGGCGAGACTTGTACAATTTATCACAGGAACATCAAAGGTCCCGC TGGAAGGTTTCAAGGCGTTGCAGGGTATATCTGGCCCTCAAAGGTTCCAGGTGCACAAAGCATATGGAGCTCCTGAACGCCTGCCTTCAGCTCACACATG CTTCAACCAACTGGATCTTCCAGAGTATACTTCGAAAGAACATCTCCGAAACCGTTTGCTGCTTGCTATTCATGAAGCCAGCGAAGGTTTCGGCTTTGGT TAA
AA sequence Show only first row Show all	>Lus10032589 pacid=23146334 polypeptide=Lus10032589 locus=Lus10032589.g ID=Lus10032589.BGIv1.0 annot-version=v1.0 MKLKRRRSLEVPTKVKSFINDVTAVPLEQIEEPLKGFAWEFDKGDFHHWVDLFNHFDSFFDKHIKPRKELQLDGSFLESDARFPREAVLQILRVIRIILE NCTNKHFYSSYEQHLSALLASTDAEVVESCLQTLAAFLKKTIGKYSIRDASLNAKLFSLAQGWGGKEEGLGLVACTVDNGCDPVAYDLGCTLHFEFYGLD ESQSESQRAEQSTQGLHIIHLPNTITLPETDLELLNKLVAEYKVPQSLRFPLLTRLRFARAFGSLASRRQYTCIRLYAFIVLVQASSDADDLVSFFNSEP EFVNELVSLLGYEDAVPEKVRILSLLALVALSQDRSRQHSVLAAVTSGGHRGILSSLLQKAIDCVVNRTSKWSVVFAEALLSLVTVLVSSSSGCSAMREA GFIPTLLLLLKDTDPQHLHLVSTAVHILEAFMDYSNPAAALFRELGGLDDTISRLKVEVSYIENSQMPEDSDSRGRSLPNVEGASSDLDDMRPLYSEALV SYHRRLLMKVLLRAISLGTYAPGNTSHIYGSEENVLPQCLSIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFSVLDAANLPSAFMDAIMDGVICSAEAI ICIPQCLDALCLNNNGLQAVKDRNALRCFVTIFTSRSYLRALTGETAVSLSSGLDELMRHASSLRGPGVDMLIEILSNIARLGSVADGSSLAGSSSDASF TAADVPSSSAAVPMETDAEERSPVLDEGKGVAKMERSEQSVDQSSDAFIVNVDTFLPDCVGNAARLLETILQNADTCRIFVEKKGIDAVLNLFSLPLMPV TSSIGQSISIAFKNFSPQHSAPLARAVCSFFRDHVKSTNELLDAVRGTELAAVDSAKQTTILKHLSSLEGILSLSNLLLKGTASVVSELGTADAEVLKDL GRTYREIMWQISVYNDSKLEKKRSEEPEMESADGLPSNGVGRESDEDASIAAVRYMNPVSIRSNSQSFWGGERDFLSVLRNGEVLHRRSRNGLARMRGGR SGRHLDALNTDSEAVSNAFEASSQEVKKKSPEVLVAEILNKLVSTLRSFFTALVKGFTSPNRRRADVGSLAAASKTLGSSLATMFLEALSFPGYSTAVSV KCRYLGKIVDDIAALTCDSRRRTCYTIMVNNFYVHGTFKELLTTFAATSELLWTSPYPYSTSGVDEEKATDGGNKLSNCAWLLDTLQIYSRVLEYFVNST LILSPGSSSQAQLLVQPGAVGLSIGLYPVPRDPEAFVRMLQSQVLDVILPVWNHPRFPNCSPAFTASIISLITHIYSGVGDIKTSRSGAAGSANQRFISP PPDEATIATIVEMGFSRARAEEALRRVDANSVEMAMEWLFTHAEDPVQEDDELARALALSLGSSSEVSKNDNVDKSVDVLTEVPIKMPPVDDMLAASVKL FRSNDAMVFSFIDLLATLCNRNKGEDRPKVASYLCEQLKLCPLEFSKDSSALYMISHILAVILHEDGNMREISAQNGIVCTVTNILTDFKAKSSTGCEIL ALKCIGALLLILDCMLQSKPKNPPDTIEGNLKASTLDSPNPDKTSSDVSGKESDTVYERILGKSTGYMTMEDSEKALLIACDLIKQHVPAFIMQAVLQLC ARLTKTHALALQFLENGGLAAIFSLPRSCFFPGYDTVVSVIVRHLLEDPQSLQIAMELEIRQTFSGNRNAGRIPPRTFLTSMAPVISRDPVVFMKAATAV CRLESSGGRTFVILSNEKDRDKEKSKVSGGEESLRVSESKIHDSSVKCIKGHKKIPLNLTQVIEQLLDIVLNYPFSEIQNEVWGESNPMEIHGSASTMKG KSKVDETQKIQSEAERSAALAKVTFVLKLLSDILLMYLHAVGVILRRDSELCQLRSFNEIDNPNHGGIIYHVLHRLLPVSTDKFAGPDEWRNKLSEKASW FLVVLCGRSSEGRRRVINELVKAMASISNTGNNSNKSSLLPDKVMFAFADLVYSVLSKNASSSTLPGSGCSPDIAKSMIDGGVVHCLTGILQMIDLDHPD APKTVNLLLKSLESLTRAANSSRQIQKIEELNKKETTSSNRRLDGQTASLAADTAGLNSNISATLEVPGVEEAEELHPQGTAEVEGSGDALANQPGEQGM RIEVVEGTNPSLEMRMGFMRGEMEGADQIEMTFRVENRTNDDMGDEDDDMADEGEDNEDDDDDGEDEDEDVAEDGGGMMSLADTDVEDHDETGLGDAYND DMMDEEDDDFHENRVIEVRWREALDGLDRLQVLGQPGGGSGLIDVAAEPFDGVNVDDLFGLRRPLGLERRHPGGRSSFDRPVPEVDGFQHPLLSRPSQSG GLLSIWSSGGHLSRDLEALSAGNSDVSQYYMFDAPVLPYNGDRLGSAAPPPLTDYSVGMDSSHLQGRRGLGDGRWTDYGQLQPGAQASVIAQAVEEQFLS QLDTVGPTPGGSAEREPQNMEMQENQPSVAPHPNDGQVVTEDNSSRILPAEVPQQESAFEEENDVEALQLQEGMVDQTLSQSNTHNVEDGMEVGEGDIMT SDPAQPLPEPIDSSAQHYPLLQHEVGQESPLNIQILPAQIHDHGGSSRDDTSDDVDMGGAGEQSLPVPEHAVDNQSSIQETVVALGANQTDQNSLNSEAS AANAIDPTFLEALPEELRAEVLASQQVQSVQPPVYAPPSVDDIDPEFLAALPPEIQAEVLAQQRAQRITQQAEGQPVDMDNASIIATFPADLREEVLLTS PEAVLSALPSPLLAEAQMLRDRAMSHYQARSLFGSSHRLGVRRNGLVFDRQTVMDRSVGVSIGRRATSSIVDGMKVKEIEGEPLLDANALKALIRLLRLA QPLGKGLLQRLLLNLCAHGSTRATLVRLLVDMIKPEAEGSLGGLAKINSQRLYGCQSNVVYGRSQLLDGVPPLVVCRILEVFTYLATNHSSIANMLFHLD PSVVPDSLRVNSSESVMDKGKGKVEDGGVVFKPSGDPDDVPLILFLKLLDRPLFFRSTAHLEQVMGLLQVVVYAAASNLESQAQLGHVTDNSHKLTSGEV TDDVQTDNQLEQESTQADRTVAAESYISNGKKSTHTLGVFMRLPRSDLRNLSNLLGREGLSDKVYMLSGEVLRKLASVSAPLREFFMSELSDLAHGLSSS AVSELVTLRKTNMLGLGSGSMAGAAILRVLQALSSLTTPTAGVNVDNKSSGGQEQESVWNLNTGLEPLWNELSECISVTEMHFGQGTLNQTILGTNLRDQ VPGSVTSSPLPPGNQRLLPFIEAFFVLCEKLQANNSSGQQDHADSTVKEVKESGAGNYITIASGGDSQKKLDGVATFSRFAEKHRRLLNAFIRQNPGLLE KSLSMMLKAPRLIDFDNKRAYFRSRIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRPTPDLRGRLNVQFQGEEGIDAGGLTREWYQILSRVLFDKGAL LFTTVGNNATFQPNSNSVYQTEHLSYFRFVGRVVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDPDEE KHILYEKNEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQINSFLDGFNELIPRNLISIFNDKELELLISGLPEIDLEDLKANTEYTGYTAA SSVVQWFWEVVKDFSKEDMARLVQFITGTSKVPLEGFKALQGISGPQRFQVHKAYGAPERLPSAHTCFNQLDLPEYTSKEHLRNRLLLAIHEASEGFGFG

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Lus10032589 [exp]	0	1
AT2G46560			transducin family protein / WD...		Lus10005975 [exp]	1.0	0.9843
AT4G39420			unknown protein		Lus10006814 [exp]	2.0	0.9833
AT2G26890		KAM2, GRV2	KATAMARI2, GRAVITROPISM DEFECT...		Lus10033077 [exp]	2.8	0.9743
AT1G48090			calcium-dependent lipid-bindin...		Lus10037833 [exp]	3.5	0.9755
AT5G47490			RGPR-related (.1)		Lus10007471 [exp]	4.2	0.9675
AT5G47490			RGPR-related (.1)		Lus10028946 [exp]	4.7	0.9648
AT4G00800		SETH5	transducin family protein / WD...		Lus10002679 [exp]	4.8	0.9530
AT1G48090			calcium-dependent lipid-bindin...		Lus10017107 [exp]	4.9	0.9717
AT1G58230			binding (.1)		Lus10028167 [exp]	5.9	0.9737
AT2G35630		GEM1, MOR1	MICROTUBULE ORGANIZATION 1, AR...		Lus10001216 [exp]	6.3	0.9681

Compare expression of checked genes

Lus10032589 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.