Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G80950 343 / 3e-116 Phospholipid/glycerol acyltransferase family protein (.1) AT2G45670 105 / 7e-25 calcineurin B subunit-related (.1.2) AT5G60620 58 / 4e-09 GPAT9 glycerol-3-phosphate acyltransferase 9 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003950 [exp] 561 / 0 AT1G80950 492 / 4e-174 Phospholipid/glycerol acyltransferase family protein (.1) Lus10009312 [exp] 96 / 2e-21 AT2G45670 671 / 0.0 calcineurin B subunit-related (.1.2) Lus10015853 [exp] 95 / 4e-21 AT2G45670 672 / 0.0 calcineurin B subunit-related (.1.2) Lus10041384 [exp] 94 / 8e-21 AT2G45670 647 / 0.0 calcineurin B subunit-related (.1.2) Lus10036544 [exp] 94 / 8e-21 AT2G45670 692 / 0.0 calcineurin B subunit-related (.1.2) Lus10023947 [exp] 56 / 3e-08 AT5G60620 655 / 0.0 glycerol-3-phosphate acyltransferase 9 (.1) Lus10014443 [exp] 53 / 2e-07 AT5G60620 617 / 0.0 glycerol-3-phosphate acyltransferase 9 (.1) Lus10036259 [exp] 43 / 0.0003 AT4G30580 340 / 6e-116 lysophosphatidic acid acyltransferase 1, EMBRYO DEFECTIVE 1995, Phospholipid/glycerol acyltransferase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G042200 [exp] 421 / 1e-146 AT1G80950 506 / 7e-180 Phospholipid/glycerol acyltransferase family protein (.1) Potri.002G134100 [exp] 400 / 3e-138 AT1G80950 476 / 1e-167 Phospholipid/glycerol acyltransferase family protein (.1) Potri.014G074300 [exp] 105 / 7e-25 AT2G45670 710 / 0.0 calcineurin B subunit-related (.1.2) Potri.002G151800 [exp] 99 / 3e-22 AT2G45670 716 / 0.0 calcineurin B subunit-related (.1.2) Potri.004G183300 [exp] 60 / 1e-09 AT5G60620 686 / 0.0 glycerol-3-phosphate acyltransferase 9 (.1) Potri.009G143200 [exp] 57 / 5e-09 AT5G60620 679 / 0.0 glycerol-3-phosphate acyltransferase 9 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0228 [flax] [poplar] Acyltransferase PF01553 [flax] [poplar] Acyltransferase Acyltransferase
Representative CDS sequence Show only first row Show all	>Lus10032706 pacid=23159012 polypeptide=Lus10032706 locus=Lus10032706.g ID=Lus10032706.BGIv1.0 annot-version=v1.0 ATGGAGACTGAGCTCAACGATGTCAAGCCCGTGCCTCCCAAGGGGCACCTCATCTCCTCTTCTACCGAATCTCACTCTCCACCATCCGCCCTCGACGATG CTTCTGTAAAGGACGACCGGCCCCTCCTCAAATCCGACTCCTCCGGTGATAGCGGAAGAAGAATCTCCTCTGACAGCCTAGACGAGCTCAACAAGAAGTA CGCGGCGTTCGCTCGCCGCGACGTCTACGGGCCCCTGGGACGCGGCGAGCTTCCGTTAGGGGAGAAGTTCCTGCTTGGCGTCGCTTGCCTCACGCTCCTC CCGATACGCGTTGTGCTGGCGTTCAGTATCTTGTTCTCCTATTACTTGGTGTGTAGGATTTGTACGCTCTTCTCATCCCCCAATCGGGACGAGGCGGAGG AACAGGAGGATTTCGCTCACTTGGGAGGCTGGCGGAGGGCGGTGATTGTCTGCTCCGGGAGGTTTCTATCTAGAGTCATGCTGTTTGTGTTAGGGTTTTA TTGGATCAGCGAGAGTTTTAGGGATTTAGAAGAGCAAGAGAAATCTCCGCCTCAAGGCAAGTCCTCCTCTCAGAATGAGGGCAAAAATCAATCTCAACCA CAAGAAAGACCAGGGGCAATAGTTTCCAATCATGTCTCACATGTTGATATTCTGTATCACATGTCATCATCGTTTTCCAGCTTTGTTGCCAAGAGATCAG TGGCTAAACTTCCTCTAGTTGGTCTCATCAGCAAGTGCCTTGGCTGCGTCTTTGTTCAACGGGAGTCAAAGTCATCTGACTTCAAAGGTGTTGCAGGTAT TGTGACAGAGAGAATTAAAGAAGCCCAGGAGAATCCATCTGTTCCCATGATGATGTTGTTTCCCGAAGGCACAACTACAAACGGAGACTTCCTCATCCCG TTCAAGACAGGTGGATTTTTGGCTGGAGCTCCTGTTGTTCCAGTGATTCTGCGATATCCATACCAAAGGTTTAGTGTTGCTTGGGATTCTATGTCGGGGT TTCGTATGAAAAGATATCGTCTCATAGGAGGATTTGGAGGATTTGGGACACTGAAGTTTGACACTACTAACTTGACATTCCTTTTGTTTAGTGTTAGTAC GTCTTGA
AA sequence Show only first row Show all	>Lus10032706 pacid=23159012 polypeptide=Lus10032706 locus=Lus10032706.g ID=Lus10032706.BGIv1.0 annot-version=v1.0 METELNDVKPVPPKGHLISSSTESHSPPSALDDASVKDDRPLLKSDSSGDSGRRISSDSLDELNKKYAAFARRDVYGPLGRGELPLGEKFLLGVACLTLL PIRVVLAFSILFSYYLVCRICTLFSSPNRDEAEEQEDFAHLGGWRRAVIVCSGRFLSRVMLFVLGFYWISESFRDLEEQEKSPPQGKSSSQNEGKNQSQP QERPGAIVSNHVSHVDILYHMSSSFSSFVAKRSVAKLPLVGLISKCLGCVFVQRESKSSDFKGVAGIVTERIKEAQENPSVPMMMLFPEGTTTNGDFLIP FKTGGFLAGAPVVPVILRYPYQRFSVAWDSMSGFRMKRYRLIGGFGGFGTLKFDTTNLTFLLFSVSTS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G80950			Phospholipid/glycerol acyltran...		Lus10032706 [exp]	0	1
AT4G25320	AT-hook		AT hook motif DNA-binding fami...		Lus10031118 [exp]	14.6	0.9004
AT4G33410		ATSPPL1	SIGNAL PEPTIDE PEPTIDASE-LIKE ...		Lus10039239 [exp]	14.7	0.8918
AT1G75030		ATLP-3	thaumatin-like protein 3 (.1)		Lus10032726 [exp]	15.9	0.8953
AT1G30440			Phototropic-responsive NPH3 fa...		Lus10038531 [exp]	20.9	0.8929
AT2G17450		RHA3A	RING-H2 finger A3A (.1)		Lus10034153 [exp]	22.1	0.8275
AT4G39330		AtCAD1, ATCAD9	cinnamyl alcohol dehydrogenase...		Lus10017285 [exp]	25.7	0.8952
					Lus10017269 [exp]	28.3	0.8896
AT1G63000		UER1, NRS/ER	"UDP-4-KETO-6-DEOXY-D-GLUCOSE-...		Lus10014147 [exp]	31.5	0.8903
AT3G15730		PLDALPHA1	phospholipase D alpha 1 (.1)		Lus10039806 [exp]	36.2	0.8925
					Lus10005393 [exp]	37.8	0.8921

Compare expression of checked genes

Lus10032706 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.