Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G36210 606 / 0 alpha/beta-Hydrolases superfamily protein (.1) AT4G14570 94 / 1e-19 AtAARE, AARE acylamino acid-releasing enzyme, acylaminoacyl-peptidase-related (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021758 [exp] 613 / 0 AT5G36210 949 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10039405 [exp] 99 / 4e-21 AT4G14570 902 / 0.0 acylamino acid-releasing enzyme, acylaminoacyl-peptidase-related (.1) Lus10015363 [exp] 69 / 7e-12 AT4G14570 871 / 0.0 acylamino acid-releasing enzyme, acylaminoacyl-peptidase-related (.1) Lus10004631 [exp] 47 / 6e-05 AT1G69020 830 / 0.0 Prolyl oligopeptidase family protein (.1) Lus10026683 [exp] 44 / 0.0005 AT1G69020 785 / 0.0 Prolyl oligopeptidase family protein (.1) Lus10017568 [exp] 44 / 0.0006 AT5G66960 1124 / 0.0 Prolyl oligopeptidase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G128700 [exp] 639 / 0 AT5G36210 1049 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Potri.008G160400 [exp] 89 / 4e-18 AT4G14570 971 / 0.0 acylamino acid-releasing enzyme, acylaminoacyl-peptidase-related (.1) Potri.018G064800 [exp] 45 / 0.0001 AT5G20520 529 / 0.0 WAVY GROWTH 2, alpha/beta-Hydrolases superfamily protein (.1) Potri.007G035900 [exp] 44 / 0.0006 AT5G66960 1087 / 0.0 Prolyl oligopeptidase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF00326 [flax] [poplar] Peptidase_S9 Prolyl oligopeptidase family
Representative CDS sequence Show only first row Show all	>Lus10032765 pacid=23158977 polypeptide=Lus10032765 locus=Lus10032765.g ID=Lus10032765.BGIv1.0 annot-version=v1.0 ATGGCTTCCTTGGCCATCGGTATAGCCACTCTCACTCGGTTGCCTTTGACTTTGCCTTTGCCTGCTCTGCCTTCTTCTTCCGCCGCCTTCAGCTGCTTCC GCTTCAGTGTTCTCCGTACCGTCTCGCCTCAGCGGCACCATCGTCACCATCGTTTTTGTTCAATGGCTTCTTCGGTGCCCACACAAGAGGTAGCCACTGC TCCTTACGGCTCGTGGAAGTCGCCAATCACTGCGGATATTGTCTCCGGTGCTTCCAAGCGCCTCGGTGGTACTGCCGTCGACGGCCAAGGACGCCTTATC GTGCTCGAGTCCCGTCCCAATGAAGGAGGACGATCGGTTCTTGTAAGACTAGCTGAAAAGACTGGAGATGAATCTGTTGCCGTCACTCCGAAGGAGTTCG ACGTGAGGACTACTTGCCAGGAGTATGGAGGTGGTGCGTTTGCGGTATCAGGCGACACCGTCGTTTTCTCCAATTACAAGGATCAAAGGCTTTACAAGCA ATCCATTGATGACCAAGATTCTTTGCTGATGCCCATTACACCAGATTATGGTGGTCCAGTAATTACTTATGCCGATGGAGTCTTTGATCATCGGTTTAAT CGCTATCTCACTGTAAGGGAAGATTGCCGTGAAAGTTCCACAAATGGAACCACAACAATTGTAGCAGTTGGCCTCAACGAGAAGGATATCCAAGAGCCAA CAGTATTGGTTGGTGGGAATGACTTCTATGCGTTCCCACGCCTGGATCCAAACGGTCAACGCATGGCTTGGATTGAGTGGGGTCACCCTAACATGCCATG GGACAAATCAGAACTTTGGGTGGGATACATATCTGAAAATGGGCATAAAGGAAGATCGTACTTCAGCATTGTTGATGATGCTCAAAGCTCTTTATCTGTA CTTGATATTCCCTTCACAGACATAGATAACATTACTTTAGGAAACCATTGCCTATACATTGAGGGAGCATCTGCTATTAATCCGTCATCTGTGGCTAAGG TTACTCTAGATGACCATAGGACCAAAGCTCTTGACTTCAACATCGTTTGGTCATCTTCACCAGACAGTCTGAAGTACAAGTCTTACTTTAGCTTGCCAGA GTTGATCGAATTCCCTACAGAAGTGCCTGGGCAAACTGCATATGCATACTTCTATCCTCCATCTAATCCAGATTACCAAGCTGTCCAGGGTGAAAAACCT CCATTGTTGCTGAAAAGTCACGGAGGGCCGACAAGCGAAACACGAGGAATACTAAACCTGAGCATCCAGTATTGGACTAGTAGGGGCTGGGCTTTTGTAG ATGTAAACTATGGTGGAAGCACTGGTTATGGAAGAGAATACAGAGAACGTTTGCTGCTAAAATGGGGCATTGTTGACGTCAATGACTGTTGCAGTTGTGC AAATTTTTTGGTGGACAGTGGTCTAGTTGATGTGAATCGGCTTTGCATAACTGGTGGGTCAGCCGGGGGCTACACAACCTTGGCTGCTCTTGCTTTCAAA AACACATTTAAGGCTGGAGCTTCCTTGTATGGGGTGGCTGACGTAGGCCTCTTAAAAGCAGAGACACACAAATTTGAGTCCCATTATATCGATAATCTTG TTGGTGCTGAGAAGGATTACTATGAAAGGTCTCCAATCAACTTTGTAGATCAGTTTTCCTGCCCCATAATACTTTTTCAAGGATTGGACGATAAGGTTGT GCCCCCTGATCAAGCTCGCAAAATCTACGAGGCACTGAAGAAAAAGGGTTTGCCAGTTGCCCTTGTAGAGTATGAAGGAGAACAGCATGGCTTCCGTAAG GCGGAGAACATTAAGTTCACTCTGGAACAGCAAATGGTTTTCTTTGCACGCTTGGTTGGGAAATTCAACATTGCTGACGAGATTACTCCAATCAAAATCG AGAATTTCGACTAG
AA sequence Show only first row Show all	>Lus10032765 pacid=23158977 polypeptide=Lus10032765 locus=Lus10032765.g ID=Lus10032765.BGIv1.0 annot-version=v1.0 MASLAIGIATLTRLPLTLPLPALPSSSAAFSCFRFSVLRTVSPQRHHRHHRFCSMASSVPTQEVATAPYGSWKSPITADIVSGASKRLGGTAVDGQGRLI VLESRPNEGGRSVLVRLAEKTGDESVAVTPKEFDVRTTCQEYGGGAFAVSGDTVVFSNYKDQRLYKQSIDDQDSLLMPITPDYGGPVITYADGVFDHRFN RYLTVREDCRESSTNGTTTIVAVGLNEKDIQEPTVLVGGNDFYAFPRLDPNGQRMAWIEWGHPNMPWDKSELWVGYISENGHKGRSYFSIVDDAQSSLSV LDIPFTDIDNITLGNHCLYIEGASAINPSSVAKVTLDDHRTKALDFNIVWSSSPDSLKYKSYFSLPELIEFPTEVPGQTAYAYFYPPSNPDYQAVQGEKP PLLLKSHGGPTSETRGILNLSIQYWTSRGWAFVDVNYGGSTGYGREYRERLLLKWGIVDVNDCCSCANFLVDSGLVDVNRLCITGGSAGGYTTLAALAFK NTFKAGASLYGVADVGLLKAETHKFESHYIDNLVGAEKDYYERSPINFVDQFSCPIILFQGLDDKVVPPDQARKIYEALKKKGLPVALVEYEGEQHGFRK AENIKFTLEQQMVFFARLVGKFNIADEITPIKIENFD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G36210			alpha/beta-Hydrolases superfam...		Lus10032765 [exp]	0	1
AT5G01740			Nuclear transport factor 2 (NT...		Lus10001261 [exp]	3.2	0.7544
AT3G19000			2-oxoglutarate (2OG) and Fe(II...		Lus10024230 [exp]	5.8	0.7482
AT4G18590			Nucleic acid-binding, OB-fold-...		Lus10022705 [exp]	14.6	0.6829
AT3G10520		ATGLB2, ARATHGL...	NON-SYMBIOTIC HAEMOGLOBIN 2, A...		Lus10038655 [exp]	15.3	0.6732
AT2G18980			Peroxidase superfamily protein...		Lus10001622 [exp]	15.6	0.6432
AT5G08640		ATFLS1, FLS	flavonol synthase 1 (.1.2)		Lus10023601 [exp]	16.2	0.6913
AT4G21520			Transducin/WD40 repeat-like su...		Lus10002602 [exp]	16.4	0.6720
AT2G44060			Late embryogenesis abundant pr...		Lus10019367 [exp]	19.0	0.6560
AT3G26330		CYP71B37	"cytochrome P450, family 71, s...		Lus10033564 [exp]	21.9	0.6384
					Lus10001343 [exp]	22.1	0.6713

Compare expression of checked genes

Lus10032765 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.