Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G06740 123 / 7e-33 Concanavalin A-like lectin protein kinase family protein (.1) AT4G02420 119 / 3e-31 Concanavalin A-like lectin protein kinase family protein (.1) AT3G53810 118 / 4e-31 Concanavalin A-like lectin protein kinase family protein (.1) AT5G55830 118 / 4e-31 Concanavalin A-like lectin protein kinase family protein (.1) AT5G10530 118 / 5e-31 Concanavalin A-like lectin protein kinase family protein (.1) AT5G65600 117 / 1e-30 Concanavalin A-like lectin protein kinase family protein (.1) AT2G37710 115 / 4e-30 RLK receptor lectin kinase (.1) AT5G03140 115 / 7e-30 Concanavalin A-like lectin protein kinase family protein (.1) AT3G53380 114 / 1e-29 Concanavalin A-like lectin protein kinase family protein (.1) AT4G02410 114 / 2e-29 Concanavalin A-like lectin protein kinase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009423 [exp] 251 / 2e-79 AT5G06740 446 / 2e-147 Concanavalin A-like lectin protein kinase family protein (.1) Lus10028699 [exp] 249 / 4e-79 AT5G06740 455 / 1e-151 Concanavalin A-like lectin protein kinase family protein (.1) Lus10020446 [exp] 143 / 1e-39 AT5G10530 516 / 2e-175 Concanavalin A-like lectin protein kinase family protein (.1) Lus10007075 [exp] 135 / 2e-38 AT5G10530 397 / 1e-133 Concanavalin A-like lectin protein kinase family protein (.1) Lus10004279 [exp] 137 / 2e-37 AT5G10530 578 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1) Lus10007074 [exp] 133 / 1e-36 AT5G10530 426 / 4e-143 Concanavalin A-like lectin protein kinase family protein (.1) Lus10033783 [exp] 130 / 4e-35 AT5G10530 468 / 2e-156 Concanavalin A-like lectin protein kinase family protein (.1) Lus10040773 [exp] 130 / 4e-35 AT3G53810 654 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1) Lus10014648 [exp] 129 / 1e-34 AT5G10530 462 / 4e-154 Concanavalin A-like lectin protein kinase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G146500 [exp] 216 / 6e-67 AT5G06740 411 / 5e-135 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G455500 [exp] 214 / 3e-66 AT5G06740 416 / 1e-136 Concanavalin A-like lectin protein kinase family protein (.1) Potri.004G209300 [exp] 170 / 2e-49 AT5G06740 368 / 3e-118 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G262866 [exp] 136 / 2e-37 AT5G10530 384 / 1e-124 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283204 [exp] 134 / 1e-36 AT5G10530 472 / 3e-159 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283400 [exp] 134 / 1e-36 AT5G10530 494 / 6e-167 Concanavalin A-like lectin protein kinase family protein (.1) Potri.007G004200 [exp] 133 / 2e-36 AT5G10530 570 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283700 [exp] 133 / 2e-36 AT5G10530 497 / 7e-168 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283208 [exp] 133 / 2e-36 AT5G10530 478 / 3e-160 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283866 [exp] 133 / 2e-36 AT5G10530 478 / 3e-160 Concanavalin A-like lectin protein kinase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0016 [flax] [poplar] PKinase PF00069 [flax] [poplar] Pkinase Protein kinase domain
Representative CDS sequence Show only first row Show all	>Lus10032783 pacid=23158985 polypeptide=Lus10032783 locus=Lus10032783.g ID=Lus10032783.BGIv1.0 annot-version=v1.0 ATGTCAAATGACGGCTTAGACAAGCACCTCTTCAACAACGGATCCGACACGACAAACTCGACCCCGTTACAATGGAAGCTCCGTTATAAGATCGTAACTG GTGTGGCCTCAGTTCTGCACTACCTCCACAATGAGTACGACCAGAAGGTTGTACATCGAGACCTTAAAGCGAGCAATATCATGCTCGATGCGGAGTTCAG TGCCCACCTGGGCCATTTTGGTTTGACTCGGGCCATTGACAATGAGAAGACCTCTTACACTGATTTGGAAGGTGTCCCAGGGACGATCGGGTACATCGCT CCTGAGTGTTTCCACACGGGGAAAATCATGTGCGAGTCTGTTGGCTATGGGTTCGGCGTAGTGGTACTTGAAGTTGTTTGCGGGCAGAGGCCCTGGACTA AGATTGGTGGGTTCACGATCTTAGTAGACGGGTATGGTGGTTGCACCGGGAGGAGAGGATGCTGGAAGCCGTGGATAAGAGACTGGGGAATGAGTTTGTG GAGGAGAAGGCGAAACGTCTCTTCTTCCTTGGGCTGGCCTGCTCGCATCTGA
AA sequence Show only first row Show all	>Lus10032783 pacid=23158985 polypeptide=Lus10032783 locus=Lus10032783.g ID=Lus10032783.BGIv1.0 annot-version=v1.0 MSNDGLDKHLFNNGSDTTNSTPLQWKLRYKIVTGVASVLHYLHNEYDQKVVHRDLKASNIMLDAEFSAHLGHFGLTRAIDNEKTSYTDLEGVPGTIGYIA PECFHTGKIMCESVGYGFGVVVLEVVCGQRPWTKIGGFTILVDGYGGCTGRRGCWKPWIRDWGMSLWRRRRNVSSSLGWPARI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G06740			Concanavalin A-like lectin pro...		Lus10032783 [exp]	0	1
					Lus10005838 [exp]	4.4	0.7832
AT1G21000			PLATZ transcription factor fam...		Lus10005350 [exp]	6.9	0.7410
AT5G52605			Defensin-like (DEFL) family pr...		Lus10031095 [exp]	8.5	0.7410
					Lus10035508 [exp]	9.8	0.7410
					Lus10012269 [exp]	11.0	0.7410
AT5G56670			Ribosomal protein S30 family p...		Lus10019054 [exp]	12.0	0.7410
AT3G18040		ATMPK9	MAP kinase 9 (.1.2)		Lus10038956 [exp]	13.0	0.7410
AT5G04347			Plant self-incompatibility pro...		Lus10029375 [exp]	13.9	0.7410
AT5G48540			receptor-like protein kinase-r...		Lus10030777 [exp]	14.7	0.7410
AT4G15530		PPDK	pyruvate orthophosphate dikina...		Lus10006147 [exp]	15.5	0.7370

Compare expression of checked genes

Lus10032783 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.